| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_2547072
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_36628 |
2 |
1854 bp |
MLOC_36628.1 |
Available |
Available |
LOC_Os01g10790.1, FRAME:-1, EVALUE:0.0, 13101.m01165 protein WD domain, G-beta repeat domain containing protein, expressed |
| MLOC_36627 |
1 |
3408 bp |
MLOC_36627.1 |
Available |
Available |
LOC_Os01g10800.1, FRAME:+2, EVALUE:0.0, 13101.m01166 protein pentatricopeptide, putative, expressed |
CDS Structure of MLOC_36628
CDS Structure of MLOC_36627
Contig Sequence (10021 bp)
>contig_2547072 10021 assembly3_WGSMorex_rbca.fasta
CCCACCCGAGCGCCCCCGCCAGGAGAGCGCGGGTGGGGTGTCGCGTCCTCGCCCCGGCGG
CCCAAGTCTGGGGGGCGGCCGCCTCTCCTAGAGGCACCGAGAAATCGCCAAACTGGCCCC
CGAGTTCCGACGTGAACCTGCAGATTCAGAGGCTGTGTCAGTCGGGTGACTTGGCCGATG
CTTTGCGGTTGCTCGGCTCGGACGGGGTCGATGACCGGAGCTACGGCGCCGTCCTCCAGC
TCTGCTCGGAGATGAGGTCGCTGGAGGGCGGGAAGAGAGCCCATTTCCTGGTTCGTGCGT
CTGGCCTTGGAATAGATGGAACGGACAGTGTTCTCGGCCAGAAATTGGTGCTGATGTACT
TGAAGTGTGGGGACTTGGGGAGTGCAAGGAGGGTGTTCGACGAAATGCCTCAAGTGAGCG
ATGTGCGTGTTTGGACCGCTCTGATGAGCGGTTATGCCAAGGCCGGTGATTTACGAGAAG
GTGTGCTGCTGTTTAGGAAGATGCACTGCTGCGGGGTTCGACCGGACGCGTACACCATTT
CCTGCGTCTTGAAGTGCATTGCTGGTCTAGGCAGTATCGCGGATGGCGAGGTAGTTCATG
GGTACCTTGTGAAGTTGGGTTTTGGCTCGCAGTGTGCAGTTGGAAATGCATTGATGGCTC
TGTACTCAAGGTGTGGCTGTAACGAGGATGCTTTGCGGGTCTTTGAAGGAATGCCTCAGC
GGGATGCTATTTCTTGGAATTCTGTGATCAGTGGATGCTTTGCAAATGAATGGCACGGCA
GGGCTGTTGAGCATTTGAGCGAAATGTGGTTTGAAGGCCTGGAGATCGATTCAGTGACGA
TGCTCAGCGTTTTGCCTGCGTGTGCTGAATTAGGTTACGAGCTTGTTGGAAGAGTGATTC
ATGGATACTCTGTGAAAACTGGATTACTGTGGGAGCTTGAGTCTTTGGAGAGAGGAGTTG
ATGACAATCTGGGATCCAAATTGGTGTTCATGTATGTGAAATGTGGAGAACTGGACTATG
CACGGAAGGTATTTGATGCAATGTCATCGAAAAGCAACATACATGTGTGGAATCTACTGA
TGGGTGGGTATGCAAAGGTTGGTGAATTTCAAGAAAGCCTATTTCTTTTTGAGAAAATGC
ATGACAGTGGAATTGCCCCGGACGAGCACACCGTTTCATGCCTTGTAAAGTGCGTCACTA
GTTTGTATAGTGCTAGGGATGGCCTGGTGGTTCATGGGTATCTTTTGAAGTTGGGTTTTG
GTGCACAGTGTGCAGTTTGCAATGCAATGATATCATTCTATGCGAAATCCAACATGACTG
AAGATGCAATCTTGGTGTTTGATGGAATGCCTCATCGAGATGTCATTTCTTGGAATTCTA
TCATCAGTGGCTGCACTTTCAATGGATTACACAGCAAAGCGGTTGAGCTATTTGTAAGAA
TGTGGTTACAAGGACAGGAGTTGGATTCAGCTACATTGTTAAGTGTTTTGCCTGCTTGTG
CACAGTTGCGCCATTGGTTTCTAGGGAGAGTGGTTCACGGGTACTCTGTGAAAACTGGAT
TGGTAAGTGAGACGTCTCTTGCTAATGTTCTTCTCGATATGTACTCAAATTGCTCAGACT
GGCGTAGCACCAATAAGATATTCAGGAACATGGATCAGAAAAACGTTGTCTCATGGACAG
CAATAATTACGAGTTATACCAGGGCTGGTCTTTTTGACAAGGTGGCTGGGTTATTGCAAG
AAATGGCACTAGAAGGTATCAGACCAGATACCTTTGCGATTACCAGTGCTCTTCATGCTT
TTGCTGGTAATGAATCGCTGAAAGATGGCAAATCCGTCCATGGATATGCCATCAGAAATG
GAATGGAGAAAGTTCTTCCTGTGACCAATGCGCTGATGGAAATGTACGCGAAATGCGGAA
ATATGGACGAAGCAAGGTTGATTTTTGATGGCGCAGCGAGTAAGGATATGATATCATGGA
ATACACTGATAGGAGGCTACTCCAGGAATAATCTTGCCAATGAAGCGTTCAGTTTGTTCA
CTGAAATGCTGCTCCAGTTCACACCTAATGCCGTGACCATGACCTGCATCCTTCCTGCCG
CGGCAAGCCTTTCATCCCTTGAGCGAGGCAGAGAGATGCACACATACGCCCTACGAAGAG
GGTACTTGGAAGACGATTTCGTAGCCAACGCCCTCATGGACATGTATGTTAAGTGTGGTG
CATTGCTGCTAGCTCGACGGCTGTTTGACAGGTTGAGCAGCAAGAATCTCATCTCATGGA
CCATCATGGTAGCGGGGTATGGCATGCATGGCCGTGGCAGGGACGCCATTGCGCTCTTCG
AGCAGATGAGGGCCAGTGGCATCGAGCCAGACGCAGCCTCTTTCAGTGCCATACTGTATG
CTTGCAGCCATTCAGGCCTAAGAGACGAGGGATGGAGATTCTTTGACGCAATGCGTAGGG
ATCACAAAATAGAGCCCAGGCTGAAGCACTACACCTGCATGGTTGACCTACTAACCAACA
CCGGCAATTTGAGGGAAGCTTACGAGTTCATCGAGTCGATGCCAATCGAGCCAGATTCAA
GCATATGGGTCTCATTGCTGAATGGATGCAGAATTCACAGGGATATCAAGCTTGCAGAGG
AGGTGGCAGAGAGGGTCTTCGAACTGGAACCTGAAAACACCGGGTACTATGTCCTTCTTG
CCAACATATATGCTGAGGCCGAGAGATGGGAGGCTGTAAGGAAGCTCAGGAACAAGATCG
GTGGTCGAGGGCTCCGGGAGAAAACTGGCTGCAGCTGGATTGAGGCCAGGGGTAGGGTTC
AGGTCTTCGTCGCGGGCAACCGGAATCATCCACAAGGGGCGAGGATCGCGGAGTTCCTGG
ATGAAGTTGCCAGAAGAATGCAGGAAGAAGGCCATGACCCGAAGAGGAGATATGCTCTGA
TGGGCGCTGATGACGCAGTGAACGGCGAATCACTATGCGGTCACAGCTCGAAGCTCGCCG
TCGCCTTTGGGGTGTTGAATCTGTCGGAAGGGCGCCCGATCCGCGTGACAAAGAACTCGA
GGGTTTGCACTCACTGCCACGAGGCCGCCAAGTTCATATCCAAGATGTGCAGCAGGGAGA
TCATATTGAGGGATTCCAACAGGTTCCATCATTTTGAACAAGGCAGGTGCTCTTGCAGAG
GTTACTGGTAACAGCACCAGTGCTATGTGATAGTAATTAGTGAATCGGCTTGCCAGCTGC
AGTATGTTCATAGCTGTTGCTAGAAATACGAGCATGTAATATCTCTGTATCACAATCAAA
ACGTATGGGGAAATGATTTTGGCCCAGATATTTTCGCGCAGGATTCTCCCACAGAATCTG
CGTTGGGATCCTGTGAAAATCAATAGGTGCATTCTCCTATCTGAAACGTTTTGGTTTGAG
CAAGTTGTACACGATCTTGAGAATTCAGGTTTGGGGACGATTTTGAATTGCACTAGGATT
CTCCAGAAGTCTACCAGGATCCCCGAAACAAAATCGAGTTCTTCTGTTTGTTGATTTTCC
AAAGAAAAATCTGCTTAAAAGAACTGGGCCTTTGTAAGAAACAACAGTTCCAATTCTACG
AAATCATAAGGAAACCAAAAGATTTAAGCACATTTCACCATCTTTGATGAACTGCCGACA
CAAACCCAAGATGAACTGCCGACACAAACCCAATCATTCGATACTGAAACCATACATTTA
TAATGCCAACACAACGAAGATATACATGTCTATCCTAGCACCTAGCAGCACATCAAAGTA
CAAAATTTCAGTACCGCATAATTTTTGTCTCGTTACGAACAATAGTTTCTGCAGAGCCTC
TTAAGTCGTATATATGCCATTTGAGCTGTCATTTCACCAGGTCTAGCTGCAGCTGGCTTA
GGTTCATATGAAGAAGAGACAGGAGTCAGGGCAAACATGGCACTGATGACCAGAGAACAT
GTTGTGTCATATCACAGAAAACTGTCCATAACGCAAAGCCGCACATTTCTCCATCTATGG
GAAATTATATACTTTGACCACCTTGGATGTGTCGCATACAATCAGGTTATCTGAATCAGT
TGGGGCAGTGCACAACCAATTTACCTGATAATATAGATCAGATGTCAGTATTATGCCTAG
AAATTTCAATGGCATAGTAACTAACAAAGTTTACTATATCTATATGTATTGGTGTTGTTA
GTGCCATATCAAAAGACAATAGTTAAAACAAAATTGAAGGTCTAGTTATGACCTTTTTCT
TCACATCAATATCCAACACCAATTCACTATTGCTGTTTGTTTCAGGAGAAAATCCTTTGG
ACCAATCCCATACTTTGAGTGATGAGTCGTTACCACCCGAAACAAGGAACTTTCCCTTCT
CACCAAACGCTGAAAATGCTCTGTTAAGCGGCTAATTAGTGAAACAGTGAGATAATCAAG
GAATACAGAAACAGCATAAACGGACTTACACACAGGAGACAGCTGCAGTATGGCCACCCA
TTGAGTAATCAAAATGGATCCTTCTCCCTTGACATTGATTATTGCTCCCATCCCCAAGAT
CAGTTATTTTTGAGCTCATGGTCGAACCCCCTGCCCGAGAAGGGCCTCTTGATTTTGCAG
GAGCCAATTCATATTCTAGATCAACTACATCAACAGCACCGTCCCCCCTTGCAACGGCAC
AAACTTTGTACAACCCTCCTAAAATGCCCCCTTCAGAAACTGCTACTGAGTGAACGAAAG
CAGGGTTGAAACATTGCCCTGTACTACCCGAAGAACTGCTATTTTGCAATTCAGGTGATC
CTGGCATTCAACAGAAATACGTTTACAACAGAGCTTACAACTTTTCAAGGAATTAACAGA
TATTTTCCTACTACGTAAACCAACTAGCGCGACTCTTCTTTATAGTACACATAAGAGCTG
CATTTAATATGCCTAAAGCAAGTTTCATGAGGTTTACTAGGAACTGTTAGGATGCATCAC
TATCAGAACAAGGCATAAGTATCAGTTTGGAAAAGCACAAGCAATATAAGCTGTGTACAA
GATTTTAATAGAAGAATTAAGTACCATAATCAATAGAAAATAGTGTTCGCCCTTTGGAGA
AATCCCACACAGCAAGCTTTGAGTCGAGGCCACCAGTAATTACTGCCAAATCAAGACGAT
AATGCATTTAAAATAACATATCATTGATAGACATATAACAGTTCTTCCCTTGTCAGTTGC
AAAATAAAGGAAGAAGCAGGAGCAAATAAAAGTGTCAAATAGAACAAAGAAAAAGTGAAC
AATAGCAATAACCTGTCCAAGGTCTCCAAGGAATGAATTGTACGCTGCTGCAAATCTGTT
GAAGTGTTGCTAAGGAAGACAGGTTGCAGGGCAATGGAAACATTAAACTGGGAATAATAA
TACCCAAAACAAAACTTAAACATTGATATTTGATGAAAAGGTATGCATTTATCCAGACCA
AATAAGGATACACTTGTGTGGGCTTCCCTCAATCTTTTGTACAAGCACTTTTGAGTGGTA
TTGACAATCTGTGAGAGGAATGGTCAAACTTATGAAGAGTGAATAAATTATCATGCCAAA
GAAGTCAAAACTTATTTCATACAAGTTTCTTCAGCTTGAAGATACTAGAGCACCCAAAAG
CCTAGATCTAAAGTTATCCAACAATCCCCTTGCTATTCTAATTTATGTTCTAATTCTTCT
TGGTTCTAAGTAAGCAGACCTATATATAAAGCCAGTACTTTTGAACCTAAAACGGTTTAA
TTTTATTATTTCAAAAAGATCTTCTATACCTTAACATCCCCACTGTCATCTGCAGCAGCA
AGAAAGCCTTTAGAACTGACAGCAATCTGCATAAAATGTGGAATTCTTAGAATCTACCCT
TGCTGGACACAGTTAAATGTTAGTATCAGGCCAAAGGGCCTAAGTTCCAGTAATAAGAGA
AAATTCACAATTACAGCATATTTTACACCGTAATAAAAGGACTAAAAGGAGTGGTGTTGC
AGATAGCACAAAATACCTGGTTGATTTCATCTCTATTGTAGGTATATGTCTCCAGTGGCT
TTGATTGAGATCCCTGCAAGAAAACTACTTTAATCATATTCCGTGTGAAAACCAAAGCAA
AAGTCACAACTTCAAACTGCGGATACAAATATTAAGTGAGTGCTTACTTACCATACGAAT
ATCAAAGGACAAAATTTCATTTCCAGCCGATACATATACATGGTCTTCATTTCCTATCAA
ATGAAAAGTTGAAAACAAATGACATTAAAGCGTGTGAAATTTGCACATCCCACACAAAAG
GGGATGAACTCTTGAGATGTTTGGAGGGCATTATTGACCTGATTTAAAACAGAGGGAAGA
AATAGGTTTATTTGCTGCCTCAATGGTCAAGAGCACATCTTTGGTGCGCAAATCAAACCA
GCAAAGACATCCATCCTAAGGTGACAGAATAAGCTATTAGAAGTTTAGAACATGAGAGAT
TACCGAAGGGCAGAAACATCAGAATTACCAAGTAGTGCGAAATTATATGCCTAAGGTTTT
TCGCAGTGTTGAATAAACATTAGCAACTTATCATTGTAATTTCTGTAGAGATGGAAAGAA
GACCTACATAAGGAAATAACCTATTCGCCTGGGTGCATAATACCAGTACCTTTACAAAAT
ATTCTAGTGCCGCGTGCCATTTCTCATCTCAGCTTACTGGTACTTTCTACTGAGCATAAA
TCAATGCCAATTTTTCCGTGTGAGGCGAATGCTGAGAAATTCATTGTGTGGTACTGAACT
GAAACGGCACCATGTAGTCATAGTAGCATGAGACCATGAAAAAGGTCATTGGATGTTCAA
AATCTGTTATCCTGGCACTACTTCACAAGGGCATTGCATTCTGTACAATAGTAAAATGCT
AGCCATGAGATGTAGTCCAGTTAATCCTGCAGCAACGAGCTCAATATGCATCCAGGAAGC
GAGAACATCACTTGGCTGCATAGTTTTCCTTCCCAGTGCGGCAGTGTCCAAATTAGCTCA
ACCGCTTCCTGCTAAAGCTCAAGGAGCGCCACATCAAAGCCCCCACTGAAAAAACCAATG
CGAAGCAACTGGATTCCATTGACAACACGGAATTGCACTGCTGCAGCATTACAGAAAAGC
AGCAGGCGGGCCACGAGATACGGTCACTATACCAGCCAGCGCCCACGAGGTGTTCGACCA
GTGTCCCAACCGAGAGAAACCATGCCACAACTAGGGGCAGCGCGAGGACGGCCGCCACAG
GCTACAGGGTGTTACGCGAGGCCATGGAACGGGGTAAGACCTTCTTCTTGGAGAAAGATC
AGAGGCTGGGAGCGAGTAGAATAGAAGCGTGTACCTCGCCGGAGGACGCGACGACGCCCG
GGCGGGCCGAGGACGCTACGCAGCAGGTGACGGCGCCCTTCTTGTGCCCCCGCAGCCGCC
GGGGCTTCCGCTCCATCGATGTCGCCGCCGGCGCCGCCGCCACCGTTTCTGTCTCGGACA
TGGCGCGCGTGGCCGGTGAAGACGCGAGGCTTTCTCTTCCCCCCTGACCCTTGTCGTCGG
CGCTCACCCAGGCTGAGAAAGCACGGCACGGGTGCGCGTGACCCGTTCGATTGAAATATG
AACGGTCTAGATGAGATCCTCGCTCGTTTATTTCAGACAGACTAGTAGGGCATACCCCCA
CCCTAGAAACAGCGGCTCGTGCCGGAGCTGCTTCCGTTCCACCACCCAAGTCCGGCGACT
CCGCCGGCGAGTTTCCATAGGAGAACGCGGACCCTAAACGAAAGTAGTAGAGTCAACGGA
CGGTAACACGGGAGCCGACCATCTAACCATGTTCGCATAAATTTCAAACAAAATCTAAAC
AAGTCAGACGATTTTCATTTATATCAAAACACATTCATTATATTTTTAACATGTTTTATT
AAATTTAAGCATCAAATAGTTAACCTGGTCTAAATCTTTAGGAGCATATGTCCTCTAATC
TTTGTTGTTTCCATGTCCGGCATTCTTGACGGTTGTAAGCCACGGGGAGTGAAGACACAA
ATCACCAACAAGGAAGAATAAAACATGTGTCAAAGACCGTCCCACATGGGACACGAGGTG
CCGTCATCTTCCATGTCCTATTCATTCACATTGGATGTACCAATGTCATGTTAAAGAAGT
TATCATCGTACTCGAAGCATACTTCAAAGGACTTGTGGATTTGACATGTTTTCTTTATTC
AGGAGACTTTATCATGGGAAAGCACCATCGTGCAATTACGTCGTGTGCTTCGGAAGCGGC
TCGAGAAGGAGTCCGGATGAATGAGTTCATGTCCGATCTAGGTGTGGTTCCTAGTGCATC
GTATCCCATAACTATCTTTTGATGACTACATTGATGCCATTGTCATTGCCAAGGAGCCTC
GGTTTCACAAGAAAACTAAGAATATCAAATGTCATTTCAACTCTATTCGTGACTACGTCA
AGGAAGGAGACATGAAGACTTGCAAAGTTTATACGAATCTGAATGTTGCCGACTCGTTAA
CTAGACTTCTTCCACGAGCAAAACATGATTAACACCAGGACTTCATGGTGTTAGATTCAT
AACAATTCAAACTAGATTATTAACTCTAGTGTAAGTGGGAGACTATTGGAAATATGCCCT
GGAGGCGGTAATAAAGTTGTTATTATCATATTTTCTTGTTCTTGATAAGTGTTTATTCTC
CATGCTATAATTATATTAACCAAAAACTCGATACATGTATGGATACATAAACAAACATTG
TGTTCCTAGTGAACCTCTACTACACTAACTCGTTGATTAAGATTTATTAACCATAGACAT
GAGTTGTCATGTTATAGCGAGATCACATCATTAGGAGAATGATGTGATGAATAGACTCAC
TCGTAAGCTTAGCATATGATCGCGTCACTAAGTTCAAATTGCTATTGCTTTCTTAATATC
AAGTCTCTATTCCTTAGACTATGATATCACACCACTCCCTAATACCGGAAGAATGCTTTG
TGGGTATCAACCGTCACTTCGTAACTGGGATCATAAAGGTGTTTTTCATGTATCTCGGAA
GGTACTAATTGGGTTGTGTGGATTGCGACTGGGATTTGTCACTCCATATGACAGAGAGAT
ATCTCTTAGCTGTCTTAAGTAGCTTGCAAGCATGTGACTAGTGTGTTTAGTGACAGACAT
CTTGTATTACGGAATGAGTAAAGAGAACTTGTCGGTAACGAGATTGGACTAGATATATAT
GGCGATACCGACGATCGAACCCCGGGAAAGTAACATATCTCCACACAAAGGGTTGTGTAC
GGGACTATTTGAATCCTCGACGTCATGGTTCAAAACAATAAAGATCTTTCTTGAATATGT
GGGACTCATTGTGGGCATTCAGGTCCCGCTATTGATTATTGATTAGAGAGTTGTCTTGAT
CATGTGTGCATGTTCCCGAACCCGTAGTGTCACACACTTAATGTTCGGTAAAATTAGGGT
AGTAATGAGATATTCATGATGGTGAGACCAAATATAGTTCAGAGTCTCGAACGGGATCCA
GAATATCAGGAGGAGCTTTGGAATGGTCCGAAGACAAAGTTTCATATAGGAAAGTGTTTT
TCAGAGTCCTAAAAGTGTTTTATTCTTTTCCGGTATTTGTATGGGGAGATTCTAGAAAAA
TCCGGGAGTCCACCAGTGGGGCCCACCTGCCCCGAAGGGCCCACACGGACCCAAGGGAGG
CGCACCAGCCCCCTTGGCCCATGCGCATAGGGGAAACCCCAGCCCCACAATATGGAAGGG
TGAGGGAAGACCCCTGATGACGAGATGATGTATATACTTCTCGCACCTCGTTACTTACCC
CAAGTGGAAGGTTGAGATGTCGTCAACGGCAAGTTTTCCCTTACACGGGAACTGTAAGTT
TTATCGAACCAGGCCTAGGATCAACAAGTAGGTGTCTTACACCCTCGCGCTAGCAGAAGA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCGAGTACAAAGAGGTTGTCAATC
T
