| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_2546996
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_36574 |
3 |
949 bp |
MLOC_36574.2 |
Available |
Available |
LOC_Os05g38610.1, FRAME:-3, EVALUE:1e-97, 13105.m04054 protein clathrin adaptor complex small chain domain containing protein, expressed |
CDS Structure of MLOC_36574
Contig Sequence (9748 bp)
>contig_2546996 9748 assembly3_WGSMorex_rbca.fasta
GCGGCACGATCGTCCGCGCCGGGGGTGGCGGGCGGCGTGGGCTGCTGCGCGTCGGCCCCG
GCGGCGGCCACGTCCCACCGCGGCACCTTCATGGTGTCCCGCGGGAAAGGTTTCCCCCGG
ACGATCCTTTTAACGACGCCGTGCGTGCGTGCGTGCGTGCCCGGCCCGCACCAGCACCAG
CAGCTGCACACGCGTTGCTTTCCGATTAGCTAGGATGGAGCACGTAGAGAGCAGGGCACG
TAGTACTCCTCTAGCTAGCTAGGAAACGAAAAGCGATCTGGGCGGGCGAAGTCGGCTGGG
ATCCGAACGACTGGGCGCCGCGCATGTAGGGGATGGGATGGGATCTTTGGTGCCCGGCCG
ATCGACGTCGTCGGTTCGATCCTGACTCGTGAGAGTGGTGGAGACTGTGGCCCGGGCGAG
CGATCGACAAGGCGTCGCTGTCGCGCCACAGCGCAGCGTGCGCGCGTGTCGCCCGGTCCT
TCGCCCGCGTTCGTGTAGGGCTGGTGGTCTGGTGACGACGCCAGATATTAGGAAGCGTGC
GCTGGGACTGGGAGTGACTTTTCGCTGCCTTTTCCCATGGGTTCGCCGAGACGGAGGAGC
TAGCGTGGCATGGTGCTTTGGCCATGGTTAACGAACAAACCGAAGCTGGCGTGGCTGTCG
CGGCGAGGGGTGTCGGACGGTGGTCGTTGGCGGCAAAATCGTGGTTGTTGCTTGCTCGCT
CGCTCGCTCGTGGAGAAGTCATGGGAGAGACGATGACGCTTGTGTATGTGTGGTTATATG
TTGTGTGTCAGGTCGGCCGATTGTACCTTCGACGCATGCTACTATCATGGGAGTAGCATG
TTCCATGACATGTTGTGTGGGCGGTTGAATTAATTATAAGCTGGACTTGCATAATTAAAC
AGCCAGTTCTCTTCTTGATTGTTTTGAATTAATTGTCTTAGATTTGTTTAAATACAAATG
TATCTAAAAGCATCTACAGCCTTACGTTCCAAAAACGTTCGGACGGACAGCCCGGTCTCT
GATCGGTTGCCAAAAAGCAACTCAGACTCGTTCCTCAAAAAGACCTCGAACGTCCGGGCT
AACCGGCACCTCTTTATGATATGGACGTGTTCACCACGTCGGACTGACGATGGCGTCACA
CATGGAATCGCTCGGAAATCCGGCGTTCCGACGTACGTCTCCTTTGATGGGGTGTGAACG
TCACATGAGCTGCTCCGGCTCGTCGCTCGGGGCCAAATTCGCCCATTTAAGCCGGCCGGC
TTCCCCCAATCCTACCCACATCCAACTCCTCCCTCTCTACGCTGCCAGCCCGTGTCCATC
CACCACCTCTCTCTCGTTCCTCCATTCGTCCCACGCCGTCCGGCTTCGCCATGGCCCGAC
ATAAGAAGACAACCGACGGTATGCTCACGTCGGAGCGCCGCTTCCAAATCAAGGAGCAGA
TCCAGGTGAGACACGCCGCCTGAATCGGAGTCGGTCTGCCACCGGAATCGAGGAACCGAA
GGAGTAGCCAGATGAGGAGGATCAACATTCGGTTTCGATGGAGGAGGGGGAGGAGCGGCC
AGAGGAGGGGATGAGGAGTTGGATCCTGCTTCGGTCAACAACATGGAGGAGGTGGAAGCG
GAGTTTGCAGTCGTCCAATCGACCGAGATGGCGAAGCAAGAGGCCATCCTAAAGTCCATC
CAGGATGAGGCCTGTGTGGAAGCCAATTGGCAGCTCATTCGACACAAGCGGGCGACGACT
AACGCGCTTTTCGCTGAATTTGACGCGGAGGCGGAGCACCAGAGTTGCGGCTGCTTCCCA
TACCCGGAGCCAAGCACGAAGATAATAGATATCTCCCACGAGAATTAGGGTAATATAGGT
TAGAGCATCTATAGCGGACTTAGCAAATATGACCCTTTATACGCCCGCGGGTGCGTCCAG
TCAATGACCGGGCGTGTCTGTTTTGAGCCCTTACTTTTTCATCTGCACTGCCGCACTTTT
CATATTTTTTTCTCATATGTCCTATCACTTGCGCGTGATTGATGGAGAAAAAGAGAAAGA
AAAAAAAAAGAATGAATAAGGAAAAAGAAAAGGTGGTCAGAGGTGGGGTCAGGTCCTACA
TGGCGGACTAACGGGGCGTGCCTGGGCGTGTCCGCGAGCCCTCATATCGTCCTCATATTT
GAGATGGATATGCGGGATGTCGGTCGGCCCGGACGTTTGAGACGGGTATGAGGGGTCCGA
TTGGGTCGCATTTTTGTGATCGAACGGCCTGTCCGGACGTTTGAGACCGATATTAGTGCT
TTGATTGTAGATGCTCTTAGTTGATCTATGTAGTACATTGAATTCGTCGATTGCGTGCTT
TTGTATGAATCTAAGGTTTATTAGGCATCCGGATGCACAGGAGCAAATTTGAGGCATCTA
CGAGGTCAAATTTTGATTTGCTTAGATACTCTAACACTACCTATTTAAACAAATCTAAGA
CAAGTAATTGACTGAGGCGTTGGATTTGCTGTCCGCATATATGTACTCCCTTCATTCCTT
TATGTTAGATATATTATTTTTGACACGGTGATCAAGGCATATAATTATACACATGTTAAA
AAAAATAACCTTGCCTACATAATTAATTAGCAGCAACTAAATCATTTAGGCTAGAAAAGT
AAAAGATACACGCAATCCGGAGAGATACTTTTCTTTCTCTCTTTACAAGAAGATGCATGC
AATTAGGGGAGAGATATTTTTATTTTTTAAGGATAGCAATGTAATTATGAGGAATTAGAT
GAAATGCACCTTACATTGTGAAATTTTATCAAAAAAACAAATACTCCCTCCGTTTAGAAA
TACTTGTTCTAAAGATGAATGTACTAGACTTATTTTAGTTATAGATACATTCATTATATC
CAATTTTTAGGACAAGTATTTCCGGACGGAGGTAGTACATCTTAGTAAAGAAACGGAGGG
AGTATTGTTTAAGACAAGTAACATGGGGTGGAGGTAGTAGTACATCGATTGAGTTCAAAA
AAGCAACGGAACAAAGGTAGCTTTAACCAAGGATCTTCATCTGCTGCGTGATCGCAACGG
TAGCTTTAACCAAGGATCTTCTTCATCTGCTGCGTGATCGCAACGGGCTACCTTCAGGCT
GGAGGCTAAACGAGACACGAGCGGACAATAGACAAGATACAAGTGCACAAGCTTTCATAA
GGGAATTTCGGCAAACGTTGGTATTGTTGCTTTCAGCGGAACATTTACTACTTTGAAGCT
AGAAGGGGGCGACGGCTTATTAACCTCCGTAAGAATTGTATTGATACAGCAAGTATAGTA
AAACAACACGAAAGTCAACTGAACCAAGTAAAATTGAGACAATCACATTTCACAACCTTG
TCTACACAAATTTTGAAGACTTGTAAAACTGAACAATCATATAACGTCAACGAAAACGCG
TAATTTTACACCCACAGATCCGGACATTTCCCCTCCTTCCTTTTCCTTTGCTTATGAAAT
GAACACATTGATTAATGCCATCTTCATCTCCGAGATCATAACACGTCACATTAGCAGAGA
TTTGGCAAAGTGCTCTCTTGCTGTTGTTAGGGCCTGAACTATAGTCTGCACACAGAAAAC
ATTAACTTACAAGTTCAGTTAAAGCAAACATTAACTTACAAGTACAACATAGCAACCAGT
TTCATAAGTAGAAAGAGATTATGTCTGCAACCTACCTGCTCGGCGATTGACGTGGCACCC
TCTGCTCCATGAGCTAGTACCTTTTCAGCTATCACACTTCCTTCTGTTTCTAGGACAATC
CTGGGAAACCATTCAAGAAAATAAGGTACAGTTTAAGCAAAGGAATAAATCTTGGAACAC
TAGTCATATATGGAAGCCTGGCAAAAACCTGTGAATCAACGGTATTTAATATATCAATAA
AACTTCGAAATGAGAAGTTTGTAATTCTAGATCCAGTCATCTTCTCATTTATCAAATCTT
TGCAACCAAGGGCCATATTTGAGGTATAAAAAAACATGCTTCATTAACTAATGGTGTGTG
CCTTTTCTTTTGTGCTGGTACCAATAAAATTCATTTTTCATGCCACCATTCCCAAAGACC
GATTTTATCATGAGCAGGTAGATGAGCAAGGTCAAGTGTTATAAAGAAGATGAAGAAATA
TAATTGTATGATAAAAGGTAGTGAGATTAGGACTTACCCTCCATCAACAATTTCATCAAG
GCATAATAGGATTAGATCCAGATTTTCAAGAGCTGTTCTTTTGTCAACATTATTTCTGAA
ACCAATGAGATGGGAAACAAATTCGTATGCAATCAGATGTTGAAGTAACAATATGTGACA
ACTAAATGGGTTGAAAGTGTGACTATATTGAGCACCTAAGAATAATGTCAATGGCATCAG
CGAATCCCTGAAGAACTGATGCTAAAATAAGTTCATTCTCCTCATCTCCTCCAGAAACAA
AAAAATGGAGGTCTTGGACGAACTTATACACAACAATGTGACCATCAAACATTACAATCT
CAGCTGTAAATGAGGAAAGCAATAAATTAAACTTAGTAACTTGAATAAGGTGAATAGTCT
TGAAGTAAGAATCACACACAGATCAACAGAAAGTTTCAGACAGACACGTCTCATGTTAAA
GTAGAACAATCAACTCAAGTTAAGTGCAATACTACACGAAAACATCTTCCAACTGGTGAG
TATGGTGGAAGAAAGTGCAAACCACAATTTCAGCCAAAGCTAACAAATGTATTCTAAATT
ACTTTTCACAATCCCTCATGAAGGATACTAGTTTTTCTACAAGTATATGACAGAATATGT
GACTGAACTTATTTTCATTTTTGTTAGACAAACTTATTTTGTGGCCTCATGAAAATGCTT
GTGCGTTGCCTACTTTGCATCGCAAAGCCTTGCCAAAAATTTGGCAACTATCGTATTTTA
CACTGAATTTTCCGCCCCAATAAATGGTAGCAGAACGAATGCTTGACATGTTTTGCACAC
ATTTCCAGTATTTTGGTAAAGCAAATACTGGCTGCAATTAGAGTCCATCCAGTGTGCAAG
TTCCGTGCATCCATAGAGGCACAGGGTTGCTAACCCACCAACTCAGATTTGAGCATCACT
GAAGCATCAATTATTGTCGGATGTTAATATGCAATAAAGCTCAACTTGATGCATACTATT
TTAAGGATATATGACCTAAGAGGATGCTACATTAGGTGTTAATTTTAGAGAGATAGAAAA
TATATGAAGGCAAAACCTTATAAAAGAGAAGGATGAGGTATTGAGGACACAACAGAACAA
CATAGATAATCATATTATTGGTCGTATATAAACAAATTAACCTTTTTTCATCCGAATAAT
CATAATTTACAAGGAAGTGATTAGAACCAAAGGAAGATCAATAGGAGGTATGGTTATGCA
CACATTACTCACAGCCTTACAAGCACATTGGCGTATTTCAATTTAGTAACTAACTAACTA
GTGTAGAAGAAACTATAGTTTGATTATAAGGAGCTTTCCCCGAGAGCACCCTCTTTTAGG
AGCATATGAAAAGCAGACAATTCTGTCAGCTACAAATCGAAGCAAGATATCAAATGCGTG
AATTTGTCGTTTGAGAAGGACGGCAATATGGACTACCACAGGACCGGCGATCATCACACA
TGTTCACATACAAAATCAGCTTCCATGTTCTTAAAAATAGAATAAGGCAGAGTATAAGTT
ACCCTCCGCGCCAGAACTTGCTTTCTGGGTCTTGACAAAGACCGACTTCTCGAAGGCCAG
CTTCGCCGAGAGCACCGGCCAATCATCCGTGTAGTACTTGACGGCGACGCGCTTCCCCTC
GGAGTCCAGCAGCAGAATGTTCTTCACCGAAGGGCAGGTCTCCTGCGCGAACATAAGCCA
AGGGTCAAACGAACAGCAACAGCAAGCGCAAACTGGCTCAGGCCACCATACAGCAGATCC
CGATTTGCACCCGCCTGAAAACACAGCCTACCAGCCCAGGCTGACAAGAAACATCCGATA
GAGGATGAACTGTGCCTCAAGAACTGAATCGTCGTGAAAGTTATCATACGATGCGGCGGA
CCGACCGCGACGGATCGGGGCAACTCAGGAAATCTAGTGTACGGCGAGCCGCTGAGCGAA
CGGGGGAGAAGAGGAGCGTCGGGGGGAGGCACGTTTGCTTACCATTGGGGGGAAGCCGAG
CGGATTCGCCGGGGGAGCGGAGGAGCGGGACGGTGGACGAGATCTCCGGCGGTTGCGCAG
CGCAGGCCGACGAAGGAAACGGGACCGGGGGGGACAACGCACCGCACCGCACGACGAGTG
AGGTAAACGAAACGAGCACGAGGTGGACTACACGCTCCTTGTTGGGCCTTTACAGCTCCG
GCCCGAAGCGTTGGCGTGTTTAGGGCCGGGCCGTTGTCAAGGTTAGGCCACAGCTTTGCC
AAACTTTTTGGCAATATTTCTGTTTCTAAAAAAAATGTGTCTGCAAACAAACGAATTCCT
TTTTTTGGGATAAAATAATGTAATTCATGGTGCTCATTTTCTTAGTTAGGTTAATCTGAA
ATCTGAGTTGGATCGCTTGAGGAATAAAGTTTAAATAGTCGACCGAGACAGGTGAGAATT
AAAGATAAATAAAAATTGATGGAGCTCCACCACCGGAAGGAGATAATGTGAAGACAAAGG
GCACGTAGTCGGTGGCTTTCAGTGGGCAACAAAAATATCTTGTTTCTCCACGAGCGTGCA
AACAAGAGAAGAAGAACAAATCTCATTAAGAGTTTGGCGACAACAAATGTCGTTCTGATT
GATGACGTGGCTCAAATGGAGGCAATTGTAACATTTTTCTACAAAACCCTGTTCTGCTCT
AAAGGGGTTGCAGATCTGCAACGGGTGCTTGACAATGTCCCCATCAAGGACTGTTTCAAA
TGTTCCCCCTGAAATCCCCGGGACCATATGGCTTTCTAGCACAATTCTTTCAACATTATA
GGGATGTTTGGGGGTGTTACACCAGCCGTAGTACTACACATAGTTCGGGGTTTGAAGAGT
CTAGGGACAACAAATAATACAATTTTGGTTCTTATACTAAAGGTATCCAACCATTGCTCT
TTATCACAGTTTCGTCTGATAAGCTTATGTAATGTACTTTATAAGATTCCTTCCAAGGTT
GTTGTTAACCATTTGAAAAAAGTTTGACCGAACATCATATCAGAAGAGTAGTCCGCTTTT
GTGCCAGGAAGGTTAATCAGAGATAACATAATTTCAACTTATGGGCGCTTACATTTTATG
AAGCCGAACAAAACTAAGAGGATAGATTCTTTGCTCTGAAACTGGATAAAGGCCTATGAT
CGAGTGGAGTGGTCATACCTTAAGGGAATTATGGAGAAATAGGGTTTCCACAGCCAGTGG
ATCAAAGTAGAGATGGATATGGTGAGCACGGTATCTTTCTCGGTAATGTTCAATGGTAAA
TGACTTCATGATTTTAAACCTTCTAGAGGTACCCGTCAAGGATATCCTCTTTCACCCTAC
CTTCTCCTACTAGCAGCAGAGGGCCTTTCATGCCTATTAAAAGCAAATATTCGGTCATCT
AACCTTGGTGGAATTAAAGTGGCGGAGACGCCCTGACAGTCAAGCACTTATTATTTGGTG
ATGACATACCGTTGTTTTTAAAGCGACTAGGTAAGGGGTGGAAGAAATATCACACCTTTT
GGATATTTAATGTAAGGCTTCTGGTCAGAAGGTCAACCTGGACAAAATCTTCGGTTTTCT
TGGGTAAGGGATGTTCTGAAGCAGTGATGAAGGAGGTAGAAGCATCACCTAATGATACCA
ATGAGTCTTTGACTAATAAATATATTGGCATGCCCTCAGAAGTGGGAAGATAAAAGAATG
GAACGTTTAAGTACTTAAAAGACATAATTTGGAAAAAAGGTACAAGGTTGGCTTGAAAAG
ATTTTATCTTGTGGGGGAGGCTCTAATTAAGTCTGTAGTTCAAACCATTATAGTTTATTT
GATGGCTTATTTTAAACTCTCAAGAGGTCTATGTGAGCACATAAATTCTATATTTCGCAA
GTTTTGGTGGGGTAGCAAGTACGGTAATAGGAAGGTTGCCTAGGTTTCTTAGGAAGTGAT
GACTCACACAAAATTCAAGGGTGTTCTCTGTTTTCGTGATCTTAAATTATTCAATCTTGC
ATTGTTGGTCAGGCAAGCATGGAGGTTACTCATGGAGCCAAAAGCTGTGAGTGCTCATAT
TCTTAAGTGTCTACTATCCACACATGGGCATTCTGGATGCTTCCCTCAGGAATCACCCCC
ATAGATTTGGAGAGCAGTTTTAGAAGAGCGAGGTGTTCTTGCATAGGGACTCATTAGGAG
AGTGGGAGATGGAGCATCAACAAATATATGGAGACATAATTGGCTTCCATGGGAGTGCTC
TGTCAAACCTATCTCCGTTCCCCCCTGAATGGGCCTATTTTTGTTCAAGAACTTACTAAT
GAGACATAAGCTACTTAGAAGGTTGACTTGGTGCCCCAACAGTTTGTGCGAGTGGATGCC
GAGCCTATCGTATCTGTCCCTTTGTGCACACGTCGAGTTAATGATTTTTTGTCTTGGAGT
AAACAAAAGAATGGTGTCTTCAGTGTTCGATCTGCCTACAAGATGTTAGTTCGCACAATG
TTTAACACAAGAGACTGGTTAGAGGAGACTTTGGGGTCCTCAAGTAAAGATAAATTGTAG
AAGGATTGGGTTTCTCTTTGGCACACTCAAGTCCCAACAAACATATGACTCTTGTTGTGG
CGATTACCCCAATAGTCATTGCCTATGTATGATGTTATTGCCCAAGAAAATATGAGGATG
CACCAAATTGTAGCCTCTATGGTATAGTTTATTCATGGAGACACTCTCTCCTGGAGTGTT
CGATGTCAAGATGCATTTCGGTGACAAACAATGAAGGCCTAGTTGAACATATGATATGCA
CAAATGAAGCAAGCACAAGCAATCGGTTGTTCGAGCTACTGAGTTCAATATAACATACTA
ACTTTATATAGGTAGTTGTCTTTCTATGGGCGATTTGGTCCTCGAGGAGGAACCAATCCA
TGAATCTGAATTCAAATCCCATCTATTGACCCATTTATCTATAAAGAGGTTTATCGAAGA
GCTGAGCAACTTAGACACAAAGCTGCAAACACCGCAAATTTGAATCACCAAGAATACACG
GGTACTGTGATTAGCACCATTGATAGACTTGATCACATTCAATGTTGATGGTGCAGCTTC
GAGAAATGGTGGTGCGAGTTCAGTTTGAGTGTTTTCTGTAGTAAAACACGAGAGATCTTG
GGCTCTTCAGCTATTGTTTTTTCACATATCGTTGATCCTTTGATTTTGGAGACTTTGTCG
TGCATGGAAGTGCAAGCTTTGGCTAATGATATTCTTATTTGTTGGTTGATTGCTCCATAT
TTTACGCATTTTTAGAGCTCATTTATTACATGTTCTCTTTATTATATCATGTCTAAGTGA
ACCAAATAGTTATCTCTACTATTAAAGGGGATCTGCCGTCGTCGTGATGGTTCAACCTCG
TGCGAGCCCCCTCCCCCCGCTAGCCTTCCACCGATTTTTTTCCAACCCTCCATAAACCTG
GTGATTAAATAAAAAAATCAACCGGTTCAATAAAAAGACCCTCTAACGCAATTGTTTTCG
TTAAGGAAATGCTAACCCCCTCCCCCACCCCCGCTTCCTCTCACCCCGCACGTCGCCATC
CCGCAAACCGCTCCCGCACCCGCCTCCT
