| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_2546983
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_36568 |
1 |
759 bp |
MLOC_36568.1 |
Available |
Available |
LOC_Os06g21480.1, FRAME:+2, EVALUE:2e-61, 13106.m02300 protein 60S ribosomal protein L31, putative, expressed |
| MLOC_36567 |
2 |
1918 bp |
MLOC_36567.1 |
Available |
Available |
LOC_Os02g48650.1, FRAME:+2, EVALUE:3e-67, 13102.m05505 protein acetyltransferase, GNAT family, putative, expressed |
CDS Structure of MLOC_36568
CDS Structure of MLOC_36567
Contig Sequence (8283 bp)
>contig_2546983 8283 assembly3_WGSMorex_rbca.fasta
CGAGGCGGCCAGCTGGCGGGCGGGAGTTTTTTCAGGGTTTTTTCGTGAAGGAGGGGGCGC
GGGAGTTTTTTTAGGTTTTTTCCGTGATGGAAGATTAGCATGCCGCGGGCCTAAATGTGT
CGCAGGCCGGCCCGATTAGGCAACGTGTCNNNNNNNNNNNNNNNNNNNNNNACGCGGGCC
GGCACGGCACGGCCCATATATTAATCGGTCCAGGCGGGCCGTGCCGTGCCTGGCACGATT
ACGACGGGCCGGGCCGGACCGGGCCGGGCCGTTTGGCCAGGTACGGGAAAAAGAGGCGTC
ACTTGCCGAAGCTAGACGCTTCAGTCCCGAGCTCTCGGACCCAGATGGCATCCACCTCGC
CGGAACCCGCGGCGACCGAGACCGGCGACTCCGTCAAAATCCGCCGCCTAGAGGTCGCCG
ACCGCGAGAGGGGCTTCCTATCCCTCCTCTCCCAGCTCTCCTCCTGCCCGGACCTCACCG
AGTCCGAGTTCGCCGCTTGTTTCGCCGACCTCGCGGCCCTCGGCGACGACCATGTCATCC
TCGTGGCCGAGGACCCCGCCGCGGCTCCGGAGCGGAGGATCCTCTCCACGGGGTGCCTCT
TCGTGGAGCGCAAGTTCCTCCGCGGCGGCGGCAAGGTGGGGCACGTGGAGGACGTGGTGG
TTGACGCCGCCGCGCGCGGCCGAGGGCTCGGGCTCCGCGTCGTGCGCCGCCTCGTGGAGA
TGGCGAAGGAGGCCGGCTGCTACAAGGTCATCCTGGACTGCACCCCCGAGCTGCGCGCCT
ACTACGCCAAATGCGGCTTCGTGGAGAAGGGGGTTCAGATGGCCGTGTACTTCTGACCCA
TCCATGGGGTAATGCGCAGCAGAGACTGCATTCCTTTGTCTCGTCGCATCTAACCTTTGC
CTGTGGCGATCTGGTATCATATCATCATGCTGAACTTGTATGTGTTAGTGGTTGAGAATG
ATATTTATGAAATCTGAGCTTTATGATGTGGCTGTATGGCCTTGGCCTGTTTCTGCTGCG
TTCATAAATGAAAATTCTGTGTTGTATTGTCTGGTTAAATACTAGCAGCGATAAGTCTGT
GGCTACTAGTGTAGATCTCGAAAGTTACTACTCCCTCCGACCCGAATTAATTCCGTGATC
TTTCAATCAGCAAAGCTGCTCGCCAAGTTTTGTCAACCATGGACAAGTGAGTGGGGGATT
TTCTCAGTCTCTTTGAGCTGAATGAAGTTCTCTGCGTAGTAGTAGATGGTAAACCATAAT
AACACCATAATAGTATCTGGTAAGAGCTGCTATAGTGAATCAAGTGTTTCTAGGCATTTA
CCAAATGAGCTAGCATAGACACATAATCATGCCTATTCCATAAAATTATGTATCACAAAG
TAACACCGTCTAACAGTGTACAGTGATTGTTGCTGAAGAACTTTTGATACCGAGGCTCTT
GAGGTTTCGCTTTGAGAGACTGACCAACTGATGCTCCGTGTAAATATTCAACATGCATCT
CCCTATAATTTGAGGCATTTAGTGGGCTGCATGCTGTTATAGTTCTACGTAGCTGGGTGA
CTCTGCTAGAGTCCTGGAGACGGTATAAAGATAGCCTGTGCATTTGCAGGGCATGATAGA
TAGCAATTACTGGTTGATGATGTCTTGTCATAAAGTTATGGGTATGGTTTCTGGAAGCTT
ATATTTTCGCTTCCATTTTCTGCTTGTGATATGTAACTGAGCGAGTACTGACCTCCACTC
AGGACCCAACCACAGGTTGAATTTGCCAAATTGGTACCTAAGACATTGCAACTTACAAGT
CAGTTCAACATCTTTAGGAAAAGGTTACTGGAAACTAATTTGTAGATGAAGAGCTATTAT
CTTCACGAGGTTTGTTGAAAACTAATTTCTATCGTGGGTAAATCTGTTTTTCCCACTATA
GGTTGTGTGGAGATATAAATCTTGCAATATAACCATCTAGTTTGCTTTACATCAACTTCT
TTGGTCCTGATAAAAATAATTATGTTGTTTCAATAGTTAATTGGCTTCCAAGTCATCTCA
ATTTGGAGTTAACAGGGTTAGTGTAGCAGTAACGTCAGTTATGATTGTTCCACCTTCTAG
TTTTGTTGAATAAGAATCTGCAAGATTTGCTTCCATATTGTTATCCGGTACTCTATTTTT
GAAAATCCTGCCCCGTTATATATAAAATTTATTGTTGAATAAAAATCTGGAACATTTGCC
TCCATATTGTCACCCGGTACTCTGTTTTTGAAAATCCTGCTGCATTGTATATCAAAGATA
TTGTTGAATAAGATCTGCAACTTTTGCTTCCATATTGTTATCAAGTACTCTATTTTTTTT
TAATACTGCTCCGTTGTATTTCAGAAATAATGTTAATTTTGTTCATACTTGATTATTTTG
ATGTTTTATTTCATGAGCTCAAATACTCCCTCCATTCCTAAATANNAGTCTTTTTAGAGG
TTTCACTACAAACTACATATGGATGTATGTATATAGACATAATTTAGAGTGTAGATTCAC
TTATTTTGCTTCGTATATAGTCTTTAGTAGAATCTCTAAAAAGACTTNTATTTAGGAGCG
GAGGGAGTACATTCGACATCTTATACATAGCTTCATCTTCTTATCACAGGTAATTCATGG
CTGACAGTCGATCTATCAAAGCTGATCTGTGTTTTTGGGATCCATTCTGAAAAAAATAGT
GCTGCCATGCGACGCAGCCCTTAACCTGGCTAATTTTCCAGTACCACAATGGTTCCTTGG
AGCTAAATTATTTGTCAGAAGATACAAACTTCTATCACAGGCTGGTACTGTTGAGCTCTC
ATTCCCCTGCATTTGAATCGGATGTTATACCACGCATGTAAGATGTTATACCAAACAATG
GCCTTCTGAATAACATGCCAGCTAGTTTAGAGGTCGATATGATTACCACACTTTGTGGAC
TCATTTGCTTAGTGTAACTCAATGATAGACCATGTGAAGCCACAAAGGGTCTCTTTGTGG
ACTTTATTAAGCATCTGGACAATCTCAAGGTCACCTGGGCAGTATTCTAGCCAGGCCGTG
GTTCTAGCATGAAGCCTCCCAAAGGAAGCTACTAGTTCATGGGCTCATGGCTAAACTTAT
TTTGCTGCCTAGAAGTTCATCCAAACATGAGCATTTCCTGTCTTTCGTTGATTTTGAAAG
AAAGCGTTAGTTTGCTGGATGTTAGATTGTTTGTCTCAGTTCCTGGATGTTAAATTGTTT
GTCTCAGTTCCTAGATTGCCGAAGAAGAGATGGCATTTGGTTGTACTCCTTCCGTTGCTA
AATGTCTTTTTAAAGATTTTATTAGAAGACTACATATGAAAAAAAAATGAATCTACACTA
TATACACACCCACTTGAGGGTCGGAGGGAGTAGAAGTTTGTTTTTGCATGGTGTTTGTAG
TACCCGGTGATGAAAGAGGGGAAGAGATCGCCAGCATCGCATAACAATATCCATATCGCC
AATGTACATATGATTCATCCACATTGAGCTTACGCATCCGACATCAGATTTTATTCCATA
GAAAGTATTCAGGGTCTTCACCAAACTGCTGCTCGGCTGGGCCTAAAGGGGCATTGTATA
CGACATGTTTTGTTTCTAAACATTTGCCACTTGATTTAAGGATAGCTGGCGAGAGGACAC
TTCAACCCTGTCCGGCGTGTCAAAGTCCCAAGCTGAGTCCTCACTTTCAACAAATTGTGC
ACACATCGAACAAAGCCGGGGGCAGCTTCATCTGTTGCAACCCGCTCCTAGCCGAGAAGA
AAATGCTATAGCCCACCAATATCATAACATTGCCAAATCCTAAACATGTTCCATTAATTT
TATGATATTAAACAGGCACAGGTCTCTCAATTTCACTTCTTGAGTTCCTCTTCCACATCA
AGAATCCTCCAATAAACAAAAGCTATTTAGTTCCTAGCAAGGAATTCTTGACAGAGACAA
CAATCGAGCATCACAAGGATGTGAAGAACGCCCATTAACATGACGCAAGTCAACAGCAAG
TCAAAACTTCAAGCACTTGAACAAAATATCCAACGTCTCAAATCTTCTATCAAGAAGTCA
TGGAACATCATGAACAGTAGATAACAATAAGCTAAAGCAAGACTTCCCAATATGCTCTCA
GCAGATATGTATTAAGTTCTAACTGATTGAAACAACAGACAGAGGGTTTAGTCCTCATCC
TCCACAACCTTGGTACCCAAACCTTTAAGACCTTCCTGGGGGACTTCAGCAACTGTCACC
AGAGAGTACAGCTCCTCCTTAGCGTCCTCCTCATCGTTCCTCTTGCGGGCAATCCTGACA
CGGACTCTCCTCGGGACACTCCTGATGCCGCTGCTCCAGATGTGCTTGTTGAGCTTAACG
TCGATGCGGACATCATTTGTTCCCATGGCCTTCTGGGCAAACTTCCTGATCTCCTTGATG
GCATTTGGTGCCTTCTTCTTGAAGGTACTGTGCACAAGAATGAAGTTAGAAAACCATGAG
AAAGATAGATGAACATTACAGCTCAAGCAACATAGAAATGTAATATATAGAACACAAACA
CAAAACAAAGCAAATGTGGAGTTCATCTCAATGTAGTGCCCAAATGGAACACATGACAGC
ATATGAAGGCAGCAAGTGTAACGATGAGTAACATCTATGTACCGGACATGTAACTGTATC
AACCACAAGTTTTAAAGACAGATACCTGACTATGACCGGCCATAATGGACTTAAGATAAA
ATGACAATATAGTTTCAATGTCAAGCCCAAATGGAACACATGACAGCATATAAGGCAACA
AGTGTAACGATGAGCAACATCTATTTACCGGGCATGTAACTGTATCAACCACTAGATTAT
AGACAGATACCTGACTATGACCGGGCATAAAGGACACGCTACGATCAACTAACAAAATAT
AGTTTCAATGTACAGCCCAAATGGAACATGTGGTAGCATTGGTTGGCAACACATGTAACG
ATGAGCAACAACATTTATTTACCGGGCATGTAACTGTATCAACCACAATTTTTAAAGACA
GATACCTGACTATGACCGGACATGAACAAATAGATTGCGAAATCAATTTTTAATGTAGCG
CCCAAATGGAACACGTGAAAGCATATGAAGGCAACACATGTAACGATGAGCAACATCAAT
GTACCGGACAAGTAACTGTATCAACCACAATTTCAAGACAGATACCTGACTATGTCCGGG
CACAACGCATCAATCAACTTACTAGGCGAACCAAGTAACTAACAATGATGAGCAAGGCAA
ATACAAGAATAACAAACAACAACCATTGTTCATCATCAAGCAGAAATGATAGACAATATC
ATGGCGAAATATACAGCCCAAATGGAACACATATTAGCACTGAGAAAAGCCATACGTGTA
ACGATGAGCGGAGCTAATCTCCCGGGCATGTAACTGTGCTCAGCCACATGATTTAAAAGG
CAGACACCTGACTATACCCGATTAACACCTAATCAAGTGGCTCAGATCGAAGATCCATGT
GAAAAATATGGGATCAGATACAAGAGCAGCATCCAAGAGATCGGAATACCGCTCGGTCAT
GCGATCCCTACTTTCATCTAGCTGGAAGGATTTCATCCATAGAGGTGTGACAGCCATACA
CAAGCCCACATAGTGCTCGCGGGCAGCAACCTTTCGCGCCAGCATCTCCAACAGACGAGC
CTGCAGGCGCCATGGCGACACCCCGTGGAGCGCTGAGGTGGAATCTGACTAGCGGATCTA
CTGGGGTCGCGGAGCTCGGGAATGGAGGGGGTGGGTGAGGAGGGAGGGAGGGTTATACCA
TCCGTGGAGGCGCTTGTGGAGGTTGACGGTGTACTCGCGGGTCACCACCTCGTCCTTGCG
AGGGCCGGGGGCGCGCTTCTTCTCCGACATCTCCGACGGCCTCCTTTCGCCCTGCTCCTC
TCTCGGCTTCGATGGAGGCTGCGGCGAGAGGAGATAAACCCTAGTGGGAAGGGCAGGTCG
CAGGGGGGGCGGCTTTATAGCGGGCGAAATTAGGGCTTGCTGGCTGACCGGGCCTCTCAG
GGATGTTTCGTGACGGCCCGTTTAAGTAGGCCCTTCGTCCTTTTCTTATGTTTTCTATTT
TTTTCCTTTTTGTAAGTGAGTTTCGTGAAATCTGAGTGTGCTTGGTTTTAGGCCCAAGCG
AATTCCACCAAAAACTTTGCAGATTTGCCTCCATATAATTTGGCGAATTCTGGCTAGGGA
AATGGACTAAAGTTGACCAAGGAGCATAGGCCATGTTTTCTTAAAAAGTTCTATGACTTC
TTTTAGTCCCAACTAAAAATTCTCTAGTTCCTATCCGTTTTTTTCATTGCCTAAACATGG
ACTAAAGGTCATTAAATGTCATGCAAAAAGACCATGTTACCCCTACTAATATAGGATAAG
TTATTAAATGACATACTAGAAGTATGGGCACTGTTGGAAAAAGTGTCAAAAAAGTCTCAG
AAAGACCCTCCCATAGAGACTTCTGCCTTTAGCATCAAATACCCCATTTTAGTCCCTAAA
AGTCCCTCCTGTTTTTTCTTTCACATGTGACTAAAAGGGACTTTTTTTAGTCCCTACAGC
AAAAAGTCCATGTAAAGAAACACCCCCATAGTCACATCGGAAAAGAAAATCTAAGCACAA
GCCAAGATTTAGGTCATGGCCAAAAATGGGCACGGCTGAATTATCAATTTATTTTCAGTT
TTTGACACATATTGGATAAATTTCATCATCCCTAACAAAGAAGATTCTTTTTTTTGTGGG
TAACAACAACAAAAAAGATCTAGGAGGATAGGGTTGGCCATTGAAAGGAAGCAAATCGTC
CAAGGAGTATTATTTTCCTTTTGAGCATTTTTTGTATGGGGCAAATGGTCTAACTTGCTT
CATTCAATTGGTCAATATTTCCATTGATGCTTGAGAATTTTGAATTTAGCATGGCATTCA
ACAAGTCTAAGAAAACCATGTGTAACAAAATGCATACAATGAGTGAGTCTTATACCGTCG
CAATCAAGTATGAGTTAGAGTCAACGAGTAGAGGGAGGATTTATTAGTTGAAGCATGAGT
TGTGCGCGCTAAGAACCACATAACACATACTCCCTCTGTTCTTAAATACAAGTCTTTTTA
GAGATTTCACTAAAAGACTATATACATAGCAAAATGAATGAATCTATACTNNNNNNNNNN
NNTATATACATTTGTATGTAGTCCTTTAGTGAAACATCTAAAAAGACTTATATTTAGGAA
CGGAGAAAGTAAATTGTAGCTAAACCAATAGGCCCATCCATTCCTCCCCCACATGTTTGG
ATCGGAACATCCATTTGCGGGTAATATTTCAAGAAGTCTCAAACATCTAAGCTTCGAGAT
GCTACGCATCCCACCTCTCTTCATCAAACAAATATCGGTTAGCTTATGTTGAACCCAGTT
TTTTATTTGTCCATATGATATATGCTATTCTTTGAGTGTATTTTTGTTTTGTTTGTTGTT
TGAATAAAAACCTAAGATCTGAATTTTTTTATTGAGAGAGAGTCCTCACACAGCTACTTA
ATTGTTTAACTACTCATTGATCGTCACTTATATCTTTCGATAGTAGTTTTATGTTTACTC
TTATGCTTCACGTATATCCGAAGAGTAAATTGTGAATTAATGAAATGTAATAAATATGAA
ATTATCAATTTATTTTATACTTACTAGTAGTTTCACATCTGATTTATAAAGTAAAATCTA
TTGAAGTTTGACAATCACGATATTGATCATACAAGCAATTCACGAATGAGGAGTATAAGA
AAGAGAACTGTCACATAAAGATATATTTTCTTAGACATCTTTTATGATTGCGTATACCCA
ATAATTATTTTGAACCTTGATCAAATAGTTGAAGTTGGACAAGGAAGACAACGTAATGGG
TATGTTTGGGTATATTTGCATTGAAGTTATACTGTTATGTATCCTTCATAATGTGGTGCT
TGTTTAGAACCTTTTGATAGCTAAAACTTCGTATTAAGTAGAGATACTACTTGTGCATTC
AAATCCTTAAGCCAAGTTTCTTTCATGAGAGTCCACCATANNTACCTATATATGGTATTT
CACTGCTATTCTAAGTAAATTTGCATGTGACACGTCTAAAACCTTCAAATAAATATATGT
TTCCACTAATAGGGAAAACCCTACCAGTAGTGTTGGAAATATGTGTATCAGTAGCGTTGG
GTCGAGCTCTACTGCTATCGCACTACAGCTAAATCCTAGTAGTAGCGCAGGTATGGGCAG
CGC
