Contig Data
morexGenes
Links



Map Locations of contig_2546961 (4460 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2546961

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36550 6 1819 bp AK371586 Available Available None





CDS Structure of MLOC_36550






Contig Sequence (4460 bp)

>contig_2546961 4460 assembly3_WGSMorex_rbca.fasta
CGCCGCCGCCCGGCCGCCGCGGCCCGCGCCGTCCCCCCGCTCTGGTGTTGTCCCCCCCCG
GCGCGCCGCGTCGGGGGGGCGGCCGCGCTGGGGTCGGGGAGGGCGGCGGCGGCGGCGGCC
ATGTTCTGGAAGGACAGCAGCGGCCGGAGTAGCAGCAGCAGCGGCCGGGAGCAGCAGAGC
GGCGTCGGGCCCTTTGGCCAGGTGCGCGTCCTCGTCGTCGGCGATTCAGGTCCGTTCCCG
TCTGTGACTCCCTGGATCCTCTGGTGAGATTGGGAGAACGTAGATTAATACACACGTGTT
ACTGATGAGTGATGACTTTGATGGATCGTGAATTCTGAATTGCCTATCGAGGGTCTATTC
GTCAGTGTCCCGGTTCCACGTTCGTCCTTGGATCAAGAACGGTGAAGGAACCGAGTACAC
AATGGAGTGTTCTCTGTTCTGAGTTCGGTTGGGACAATGGTCCATCGTTCTGTTAACTTT
TCCTGCCTGTATGTGGGCGATTGGTTCACTATTGCGGGAAGCCAAATGGAGTGGGAGACA
CTCGTGTCTTTGCCCTTGTACTACCACATTTCGTTCACATTTTGTCCAAATCGTTCAGCA
AGCACGCCAATCAATTTTAGAAAAATCCTTTCCTTGTGGGCAAAAAAATCTGGCTGAAAG
GCAACCTTGTTTCACATGCCTCGGTGCACCTAGTATTTGCGATGTTGTCCTGCTACGCGT
CACAGTCATAATCTGGACTACAAAATTAAGCAATGACAAATAAAATCTGGACCAGGATCA
TGCGTGGAACCCAGTTATTTATTTGTTATAAGCTCCATACTGCATTCGCCATCCTTAAAA
TATTGAAAAATATATATATATTCAGGCAACCTTCCACTGTATTTTCTTATCTGTGCTCAG
CTGCTCATACAAGTTACTCGTTACACCAATAGTGGCTGAACTTTTCTGTATGCGCCTGAG
AGTCAGCTGTCAAAAACTACACCATAGTTGCATGCTCTTGTACTCTTCTGAATATGGTTC
TTCAGTTGCATTAACTTTCCTTCTCTCTCTCTCTCTCAGGTGTCGGTAAATCTTCACTGG
TGCATCTCATCTTAGAAGGTTCTGCTATTGCTCGACCAGCTCAGACAGTAGGATGTGTGG
TGGGCATTAAAGTAGGTGCTCTCGCTCTGTGCTTTCCCAGCTTGTACCATTTGCATTTTT
TTAGTCCACTTACATTGTCACTGTTATTATTTCAGCATGTTACTTGTGGAAGTGCAGGGG
GGTCTTCTAATAACATCAGTAATGATGCTGAAAGGAATTTCTTTGTTGAGCTTTGGGATG
TCTCAGGGCATGACCGCTACAAAGCTTGTCGTTCGATTTTCTATACACAAATCAATGGTA
AATGACATTTTTCTCTTAATTACCAGGGTTTTACTGCTCTCTGCATCTTTGTACCCAGCA
CGGCCTATCTTTATGAGCAAGCTGATCTATTTTTAGTTGTTATTTCACCCCAAAACCGTA
CAAGGGAAGGATTTATTTTTACATTTGCATCTGTTAATGCCTAAATCCTGAGATTGTAAC
AGCTCTTTTGTATTTGTTTTTCTTGCTCTACTTAGTTGAGCTGATGAAACCTCTTAGAAA
CACTCGTCCTTCTTTAGATCCATAAAGAAATACTTATTACATGAGTTGTTATTTTTTTTC
AAATACGACATTCACTGTTCCCAACGTTGTCTGTCAGGTGTCATTTTTGTTTATGACCTC
TCCCAGAGGAAGACCAAGACAAATTTGAATAAATGGGCAGTTGAAGTTGCAGAAACAGGC
ACCTTTTCAGCCATACTTGGATCTGGTGGACCAGGTGGACTTCCAGTGCCTTACCTTGTA
ATTGCCAACAAAGTGGATATTGTTCCAAGCGATGGCACTAGAGTCAGAAGCGGGAGTATT
ATTGATGTTGCTCGTCAATGGATTGAAAAGCGGGGTCTTCTTCCTCGTAGTGAAGAACTT
CCACTCACAGAGAGCTTTCCCGGGAACTCTGGGCTCATCTCGGTTAGGTTTCTTGTTGAA
GACCTTCTGCTCATATCTTGCTCTACATGCAGTTCATGTTCTTTTATGAATCAGTCATCC
TTTTTTGTTCTGTGCCGCTTCAGTTATTTTTTGCATAACATGTTAACCTTTGATTGCAGG
CTGCTAAAGAAGCAAGATATGACAAAGAAGCTGTGACCAAGTTTTTCCGCATGGTTTGTT
TCAGTTATTTCATTGATTTTTCTTTTCCATACTTTTTTTTCATCTCCTAATGCTGTTGGA
ATGCATCTTTCAGTTGATCAGGAGAAGATACTTCTCGAACGAGCCTCCTGCGCCAAGTCC
CTGGTCTCTTACTCCAAGGGAAGATAACATCCTTCCTGTAGTGACCCGCAAAGATGATAC
CGACAGCTTTCAAAGAAAAAGGTGAGCATGCTTAACATGAAACAAATCAACTCCCCAGCT
CAAAAAAATCCCAACACATACAAATAAATGGGAAGGAAAGTACAAAGGAGAACTGTTTGT
CCCCCGAAGCATAACTGTGATGGTGTAACCCCGTATTAAACATGTTGTATAGTTGCACTT
ATGCACACAATTTTGCAGCTATAGCGGCGAGGACTTCATGTTCAATGGGGTACCACCACT
GCCAGCACAAAGGAACCTCCCACCACCACCAACTCTCGACCCACAGCTGCCGGTGTTTTC
TTCAGATAACAACAGATATCACAGATTCTCCTCGCCATCGCTTACTGAGATAAGCAACAA
TAGAACAAGCCGTGAAAATTTTAATGTATAATGCAGCGGATGTCAAAAGGCTTAAAGGCT
ATCACCTGCTACCTGGGAAGCATATGGCATCTGTTGCCTTGGTGGTGTTGGATTCCAGCT
GGTATCATGAACCATCTGATGCCTTCCTTTGCAGCATACGGAAGGTGCCAAGTTGGTCTT
CTTTCTTGGCCTAGTCTCTAGCTGATTGCTGGTGGGCAACTCTTGTATTCTTTTTCCTCC
ATACCTGTTCATTTAATATAGTGACTACTTGTCATTTCCACAATGCAAGTAACTGGAAAA
TGGCACCCCGGTTCGAGAAATACATAGCAAAAGAGTAGGACAATGAACTATACATTGATA
TAGGATAAAAATATCTTTAGTGTTACATTTTCTGTAACTTATAAATTAGGAACTGGAATG
GACTGAAATTTCTTAGGGCTGAGGCAAGATATATAATACTTGATTTTCTTGAGAAAAAGA
TGCCATTGTTTGTTGATTACCTGATTGCATCCCCACAATAACACTGATTTTTTATTTAGC
TAGCTTGTTGTACATATAAAAGTTAAAGGCGTGTGTGTGTCTACCATCCTTCAATCCACA
TGATCAATATATCTGTTATTTGTGTTTCACATTTTATTTCCATTATTTGTGTGTGCTCCC
AAGGTGAATTCATAATGCCCCTAAACAGAAGAATGCATTCCTCTTCAATGAGAAGGCCCC
TGCTCATACGCTGGTAATTACTCCGTGGAGTACTGTATTCATTCCTTCCCGGAACACAAG
GACTATTAGGATGCGTTTGGTTGCAGGGACATGCTAGGGGGTTGAGGACATCCCCAACTA
CCTGGTTAGGGATAACCATTTTTTTTGTTTGGTTCAAAGGGTGGTGTTATCCCATGTTTT
GTTTGGCTTGAGAGATATAAATGAAGGATAAGGGTGCAGAGAACCTTCAGTGTACAGTTG
CACCGCTTGCCGGGGAATCCTTCTCCACCCGGGCAGCGCGGAGGAAGGAGACGAGCAGTG
TCTAAGTGCGCAACACCAAATTTGACAATGGTAGAGCTCCAGAGCCTAAGCTTACGGCAC
TTGGAAAATAGGATGAGAAGGCCTCTGCTGCCAGACGGCTGGTAATTACTCCATGGAGTA
CACTACTCCTTCCTTGCAGAAATATAAGGAATATTAGTTTTGTTTGAGTCAAACTTATTT
AAGTTTAAGTTTATAGGAAAAATATCATCACTTATAATACCAAATAATACCGTATAAAAG
CATTACATGATAGACGCATCTACTGAAATTGAGCTGGTATTATTTTGTTTGAACCTGCAT
AAGTTCAACATAAGACAAAACCTATGCCTTATATTTTTTAAGGAGGGATCAACATTTCTT
TTGGCGAGGTTGAGCTTTAGAGATCAGTGGACTGTGGGGCTGCGATGTTGGCCCCTACAT
TCTCGGCCCCAAGCAAGCAAACACATCAAGATCTCTGCATGTGTTTGGTTACCATTTTTG
CAAAAAGGGGTCTGGAATTTGATTGAAGTTAACTCGCATCCCACCTCATACTTCCTCCGT
CTCAAAATTTTTGTCTTAGGTTTATCTAAAAATAAATGTATCTAAATACTAAAATGTGAC
NNNNTACATTCATATCTAGACAAATTTAAGGCAATTTTTTTGAAACGGAGGGAGTATAAG
TCTTACCTACTAATAAAGCA