| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_2546905
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_36511 |
2 |
1500 bp |
MLOC_36511.1 |
Available |
Available |
LOC_Os06g47530.1, FRAME:+3, EVALUE:4e-157, 13106.m05043 protein TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed |
CDS Structure of MLOC_36511
Contig Sequence (4947 bp)
>contig_2546905 4947 assembly3_WGSMorex_rbca.fasta
TCCCTCGTCGACAATTCGACAAACACACGCCGTGTCCAGGTACGCGTGTTTGGGCTTGAC
AATTCGACAATTCGATATGAATATACGAGTACAATTCTGATTCCGTAGGGTGTTTCAGCT
TTGTATTAAGGCTACAGCTAAGCTCGGTCATACAACCTGTGCTATTGTCTTGCAGGCTGA
TGAGGGGGTGCTCACTGTAGTCACAGATGGTTCAAATCGTGACATCAGGTCAGATCAATG
AATTTGTTTGACTTAATATACACAATGATTTGACGTATTCAGTGTCATGTATCTTGGTCA
ATAAGCATGTTCTTTACTTGCTGAGTCAGTGTCATGCTCAAGTTATGTATCTGTGCCACA
AGTTCAGTTATAGAGACTCAAATGCATGAAGATTCCCACTTCTTATGCATCCGTTGAAAC
CAGATGGGTGGCACAAGAATGATGAGATTTTCCTACATTTAGGTTTCCAAGAAAACCTTT
GGAGTTCACCAAAATACGCATTCAAGGAGCTACTGAACTCTGCGATGTTGGAGAACAACC
ATTTGTAGGTAAGCATTTACTTCAGGGAATTTCCTAATGCCGTCAATCATGGACTCAGAT
ATATGGAAACTAATAGGCTGAAGTTTCATGTCAAAGTATCCATATGAATGATTTTCATAT
TACTTTTGTTACACATGCATACTTTTTCATGAATAAATATTGTGTCACCACATAGAAGTT
AATAAGCACGCCATGTATGATACAAAAGAAGGACTTCAAACTACCGAACATAGAGTTCTG
TACTTGAGAAATTCCTTTAGCACATACTTACTCCATTAGTAACCACATGAAACACAAACA
AACTGGAGCATTTTCTCAATATTTTTGTACTTTTAGTAGTGTCAATGTTCGTTAAATTCC
CAGTTGTGACAAGGAAGGATTATCTGTGAGTCAGGAAAAGTGGACCTGCGAGAACAGAAT
ATTGTTGACATTGAAGAACTTGTGGAGCTTTGTACCCGTATGGAAAAGGCTTGTGCGGGA
TTCAAAAGGTTTGATTTCTTTCAGATCATGGATGCTACAGACAATTTCTCAGAGAAGATG
ATAGTTGGATGGGGAGGATTTGGGAGGGTGTACAAGGTAAGCCAACATAGAAACAAGTTA
ACAAAGTGAATGCATATCCCCCTTGTCTTCCTAATAAAGCGTAGGTTTCCGCTTAGGGAA
AGTTAATTTTAACTCCCTTGGTAAAAATTGCAGGGCCAGTTGCCTGGTGGACTTAATGTT
GCCATCAAAAGAGCTGATGAGCACGCAGCAATGCTTGAAGTCAACAGTGAATTGCAGCTT
GCAAAGCTTAAGCATGCCAATGTGATTAGGTTATTGGGGTGGTGCATCCATGGGAAAGAA
AGGATTCTAGTGTATGAGTTCATGCAAAATGGTTCCTTGGATCGTTACCTATGTGGTAAG
TTTACACTACTGTAAGTTATTTCCAAGCGCGCCTCGTTTAATTCCAAGTATTTACATGCA
CGAATGCAAACCGACTACAATTAAATCAAGGCTAAAGTAACCCTAGTTCCACATGATAAT
TGATTTGAAACTATTATAGTTTGGTTCAGAGCAGAAGAAATAATTCCGAAAGATAACCAT
TCTTCAAACATTTTGCAGACAGAACAAAAGGTCCATTGCTAAACTGGTCTAAGCGATTCA
AGATAATTACAGGGTTAACCGAGGGAATTGTTTACCTGCATAAGCACTCCATGTTCTGGC
TTGTCCACAGAGATTTGAAACCACATAATGTCCTCTTGGATTGTAACATGATCCCAAAGA
TTGCTGATTTTGGATCAGCTAGAGCACTGAGTTCAGACGTAGCAGAAGAGCGTACGAGTA
GAGTGGTGGGAACCAGGTATGAGCTGCCTGTTATATCAATCCAAAGTTTAGATGTTCTAA
TCTCACAATTTCGATATCTTTTGTTTGACTTTTCAGTGGTTACAAAGCTCCGGAGTATGC
ATCTCGAGGAGTTTACTCGATGAAGACAGATGTGTTCAGCTTTGGCGTTTTGGTTCTGGT
GATTATTAGTGGACGAAAGAATACCATACTCGACAAGCGAGGGGATACAGTTGGTGATCT
TGTACGAGATGTGAGTGAACTGAACATATGTTTCAAGCAAGATTTCTTGTAGTTCACATT
CACGAGATGTTTACTTTTGTTGCCAGATTATTTTCCTTCTTTTGCGCTGCAGTTCTTCAT
GTCAAGTTTGTTGAAAACTATTTCAGGCCTGGCGTATGTGGAAGGAACAAAGGTTGCATG
AGCTTGTGGATCCGCTGTTAGGGGACGGATATGAAGTCGCTGAGATAAAGAGATGTGCTC
AGGTGGCACTGCTTTGTGCTCAGGAAGACCCTGCAGATCGGCCCGCCATGACAGATGTTG
CTGCAATGCTGAACTCTGAAAACATAATAAGCTTACCGATAGAGCCTAAGCAGCCCGCTG
CACTGATGCACGAGTGCGCCGACAGAGACACGGCGTCGACATACATGGACCAATCAAGCA
GGACAATAGACATAACCATAACGAGTTCAGCTCCAATGTCGACTAGAGTTCGAATCATTC
TAGACCCGGAGGTTTGATATGATGGAGAACATCAGTAGAATATATAACTAAAAAAACGTG
AGTGAGGATGGGCTTTTTACGGCTCAGGTAGTGTACATATTCGAGATATCAAGACCAGTT
TTGTGGAGTGAAAATAAACATCTGTGTGGTATCCAGCTACATTGTAATTCAAACGTACAA
TGTTCCATGTTTTTCTGTTACTATTGTAGCCAGTTCTTAGTGAAGTTTAGCCTGGGTTGC
TCATGTTTGGGACATGTTATTCGCATGTCCTTTTGTAGGGACATGGGAACAACTGTTTGC
AAACCAAAACTGATACTCCCTCAGTTTCTAAATATAAGACCTTTTAGAGATTCTACTATA
AACTATATATACGGATGTATATAGACATACTATAGAGTATAGATTCACCCATTTTGCTCC
GTATGTACTCCAGTCTATAGTAAAATCTCTACAAAGTCTTATATTTAACAATCGAGGGAG
TACTTAGCCGGCACATTCAGTTGGAGAATGAGAAATAAGCGCACATACCACCACGGGGCT
CAACTTGACAAGCAGCCACCACGGGGCTCAGAGTTAAGATCTGTACCTGCACATACTACG
AACATATCAGGATCTCTCCCGCAAAAGAGAGAGAGAGAGAGAGAGAGAGAACACACGAGG
ATCTCAAAATAAGCGCTGTTCAAGGTTAAAATAAATAAATCTTAATGCTGGTTAAGATGT
TTAACTCTGAACTGAAGGCTGGAAAGTTAACAAAGCCTAAGGAACTACAGAAACGAAGAT
AAAAAGAGTCCGACGTACCTCCACCCCTCCGCGATCAGGATCTCCGGCGAGCGCGACACA
ATCGAAGCCGCCGATCAGCATGCGCCAACTGATCGAGAAAGCTCGCCTCACCATGGCTCT
CCTCGACAAGGCTCGCTCTGCCTCCTCCTCCGAAGAGGTCAGCCGTCGGCATGACATCGA
GCGCAGTCGAGCGGAGGCCCGGCGAAAGGTGGAGCAGATGGCTGACACCGTGCAGTTCAA
TGACCCCTGGATCGATCCCTCCGACGTGATCAAGTCCCCTGAGGAGCTGCTCCAAGCAAG
ACAGGAAGCATGGCGTGCTCAAGCGCACCTCATCGCAATGGCTGATGATGGACGGCACAT
GCATGGACGCGTTGCTCAAGTGATGCAATTCCACAAGTGATGGTAGCAGAGGAAGAAATC
ATCAGCAGTGCAGGCTTACCTAGCTGAGAAAAGCAGAGGAAGCACCGGATAAGCTACAAG
TTTTTAGCTATAGTATGTAATCAAGTTGCAAGCGTGCAGGAGAATTGTACTGGCATGTTT
TCCAGCAACTGTGCGAGTGTGATTCTTAATTTGGCCATTAATTAGTGTGGGTTATAATCA
CAATTGATCGATTAATGAAATTAATTGTGCTGTGTAAAAGATATTGGATCTGACGTATGC
AAGCAGCAACAGATCTCTTTCTGTTGTCTGCTCCCTCCTAGTGACACTTTTTCATGAATA
ATGACAGACACACAATCCGACCAACAAGATTACTTATGTGCTTGAACTGCTATTCCAGAT
GACTGCTATTTTCCAGAAGAACGGATATGTGTGCTTGCTGAACTCCTGAATCCTGATGCA
GAATTTAGTTGTCGCATCGACAATGCAGAATTTAGTTGCTGCATCAGGACGGCGCCAAAA
AGCTGAACTCCTGAACCCTGATGCGTACATGCATCATTGTTGCCAACAGCTCGTGTGTAC
TTGCTGTCTGAATTTTGCAACTGCTGCAAACTTCGTTCAGTGCAGTTGGTGTCGATGCCA
GATCAGTTTCGTGTTACACTGCAGAGAAAATCAATGCTTGACAACAATGGTGTTCACTTC
ATGTAATTAACATATTTATTGGCATGTATCCACTGAGTTAAGGGAATTACACTGCATTTA
CATCGTCTGAATTCAAAATACTACGCAGCTTCAATCAAAATCAACTCAACTGGAATGAGA
AACATTGGCAACATCCACAGCTATTGCAATTCTTCCTCCTCTGTACCTTCAGCTTCTCGG
CTTGAATCAAGAAACTTCTCGGCTTCCTTTTTTCTCTCTAAAGGCCATTGGTTTGTTTTC
ATCTTGCCCTCCTTTTAGCGTAGCTTGCAACGTCAAGATGATGTAGAGACAAAACAGTCC
TGTTTCTGGTTGTCTGACTTCATAGCAGGTCTGAACTTCAGAGTTAACATTGATGTTTCC
TTTCCTAAGCCTGGTTGTAATGGGTAGTCTCATATACTAGTATCATGCATATGATACTAG
TGTATGATACCACATCCATAATGNNNNNTATCATATGTTAGTATTATAGGGTAGTTCATT
TATTGCCATGCAAGACACATAGTAGCA
