Contig Data
morexGenes
Links



Map Locations of contig_2546892 (6549 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2546892

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36501 1 1734 bp MLOC_36501.1 Available Available LOC_Os04g39960.1, FRAME:-1, EVALUE:9e-22, 13104.m03877 protein hypothetical protein





CDS Structure of MLOC_36501






Contig Sequence (6549 bp)

>contig_2546892 6549 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCAAAAAAAAATCATATCATGAATGCTAATTTCAGATACAACTCAGAAA
CGGACTAATTATTTGTTGGTTTAAAACCATTACTCCTTGGCATATGCAATTGCTACAGGA
TCTGCTTGACTTGGATAAGCCCCGGAGAATGGAGAGCAATGACTAGCAATACTTTGGACT
TCTGGGTTTTGAGTCTAACACATCAAAGTGCTGCCAAAAATAACTCTGTGCAAGCCTGAA
GCAATTATTGCAAGCTTGACAACATTCCAGCCAGTAGCATTTACAGAGAAGTTTCCATTG
GCCTTAGGCTCTCAGTTCAGTCCAATTCATATATCTGCAAATAAATGGAGACCAATTAAT
TCCTATCCTCACCAAATTTCTGCAGTATGATTCGGTGCTTACAAATTTTCTATGAACAAT
AATGTGCAGAGCAAACTTTAAATTCTCTAAAAGAGACACTACCTCTAAACTGTTCTGATA
GATGCTGCAAGTGAGGTGGATCATAATTTTTTCGACAAAGGATGAATTTTATTGACTCGA
AACAAAGCATCAACTAAAAACAAACACAATAAGCACACTCATGACCTATACATAGATAGG
ATACACACAGCCACACTGATACAAACACAACTAAACATGCGGACAGATAGAAAACTCACA
CAAGACCAAAGCTATGCCTAGGCCAGAAGGAAAAACTCTGAAACGATGTAAACGGACGAT
AGACGAACTGCAACAACCAATCTACATCAACTAGGTCGAGCGCACAATCCAGATCTGAAA
AGACAAGAGACACAACAACGCTGAATAAATCAACATGCAGTGGCGGAATGCTACTCCTGC
AGGAGGAGCAGCGCCGCCCCTCGATCGATGGCCTTAGTTCCCTTCCGATAACTTCCGCAT
TATCTCATCGAGTCGGGGGTCCACGATGTAGTGCTCGGAGTCCTCCTCCTCGCTGGAGCT
GCTGTCGGAAGGCGGCGGCTGGGGGATCATCGGCTTCCGGTACACCTTGTGGACCACGAA
GACAACGCCCGGCGCCTCGGGGCCAGGGTGCGCGCTGCGGAAGGCGGCCGCATCCCTGTT
GAGCCGGTACTCCTTCATCCGCCACCGTGTCGGCGAACCTACCTCCCCGTCGTTCCACGT
GAAGTGGTACGCGAACCTGCGCCGGAACGCCACCACCTCCCTGCCGCCCTCGCCGTAGTA
CGCCTTCTCGGGGCCGTACCGCACCCAGCACCCACCGGCGCCCGGCGTCGGGCACGTCTC
GCCGGCAATCTTTGCTGCGAAGAAGAAGCCCCACACCTCGCCGTAATCCCTCTTGTGGTC
GGGGGAGAAGGGGAGCTCGCGAGGGCGCAAGGACAAGACGTCTACGCCCTCCACGATGAG
GCCGGGGAAGATGTCGCCACCGAGCCCCGCCCTGGGGATGAGGTAGTGGTCGACGAGCTC
ACGGCCGGTGGGTTGGAACACGTATCCAGCTCCCAGATTAGGGTTCGCCATCGCTCTCGC
TCACCGATGCCGAAGTTGTAGGCTAGGAGGGGTAGATTCTGCGGGGGGATCCCAGAGACA
GAGAGTTCGATTATGCCATGGGTGAATTCAGATTGGGAAGACCTCCTTCTCCTTTTGTAG
CAGATGGGATGGCATTTATTGCAGGGAAGGTTCCAGAAACAAGTACAGATGGCACATCAG
ATAGAAGATGTGATCAAATTCGGTGGTGGTAACGTGTGCTCAGTTCAAACAAATTTTTGA
TGGCCCATTGAACGGGAGTGTCCAACCTGAAAATAGGGCCGGACTGAATGGCCTTTTTCA
GTCTCGTCTTGGCTTTGTTTCAGAACCGTGCATGGCCCAAGCAAATGACATCGGATTAGA
GCCTACAAAGATTGCTAATATAAGAGAGGAAGGATGATCTAGGTTCGAACACCTTAATAA
GCATTTCTTGAGTCGCAAAATTATCAGAGAATTAAGAGAGCCATCCCTCTGGCTAAATGA
AGTTTTTGAGGTTGCTTTTAACGTAGCAACGCCCCCCCTGCCCCGGGGCAAGTAGGCAGC
GAAATAGTAAGTTGTTGTCAAATCCGCATGACTTTCGGACAGTTGATGAAGAAGTGATTT
GTATTTTCGAAAGAGACAAAGTACCTTGTATGGACGACGGCTTAGAAGAATGGTTTGTCG
AACATACTGTGCTGATTTGACTTTCCTAGAACAAGAACCAAGCAACAAAGCAACAAAAAA
TAACTATATTTAGATTGCAACATCGCTAGATGAGCTCAACATGATCACATTTCAGGTTTT
TATCCCATATAAGACTATACATTCTAGTTTTAAAAGAAACAAAGAAAATATAACGTAAAG
ATTAACCAACGATATGCATGCATCGGTTCAACAAAAGCAATGATGTCGGCGTTTGAAATG
CTACGTCTATTTATAAGAGAGGAAGGGTGGTCTACTCTTCTGAACACCGCAACATTTCCT
AAGTCCCAAATTTTCTAGAGAACCCAGAGAGAAACCTCGGGCTAAATGAAGTTTTCGAGG
TTTATTTTAGTGTAGCAACAACCCATAAGCCCCGAAAGCAAGTGGATATAGGTTGTTGCA
AAATCCGCATGGCTTTCGGACAGTTGATGAAGATGTGATTTCAGTCATTGAAGGAATATA
GTACTTTGTATTGCGGCGGGTTGGGAGAGGTACTTGCTGAACATATGTGCCTTGGTTTAA
TCTTTTCTCGAACAATAACCAAGCAATCAATATTGACCATATTAAGCATCCAGCGCTAGA
TGAGATCGGCATGATCATACTCCACATTTTGTATTCCATGTGAGACCGTACATGCTAATT
TTAAAGGGATACAAATATAGCGCCAAAAGAAACTCTGTCGGCTCTTTAAACGTTATTTTT
AAGCTTTAAAATGCTATACCCCTCAAATCATTGTTTGGGCATCTTGATGGTCCGCTTTGT
TTCGATGAGATCATCAAAACTAGACCCTATGTCGTTAAGGTTCGACGTTTTTGTCCTTAA
CAACTATCATAATTTTTTCTATGGAGTTGTCTTAGTACCTTACCAGGTGGCAAACACGGA
ACAACAACTTTATGGATGTTTTCTAAATATACCCATCTCCATATCTATATCTATACTTCT
ATATCTAACTCTTGATATCTTAAAAAAGAAAAGATTTTCTCTTTCGCTCCCCACTTCTTC
CATCCTTTTGCACACCTTTGTTTTTTTTGTACCATGGGAAAGATCAGAGAAAAACTACCG
TGTGAAAGTCCCATGCACGCCGTCGCTCCGTTCTTCTTTCCCCACCCGTTCGATCTCCTT
CTGCTGTGCTCCTCCTCAGGGATCTCTATATGGCACTAAGGTAGAATAAGATGTTAGAGA
AGACGGCGCCTGCCTCGTGGATGAAAAAAGAGCTTCACGGGAAGGAGCATTGCTCTTCAC
GTTGAGCATTGCTATAAAGCCGACACTTATGAGACAACACACACGTGACATTTCACATCC
AACCATTTGTAGTTTTGTTGCTAGAGCATTTGACGGTGCTGATCATTTCTCGGATGCATG
TTGGGTATGTAACATCGTGTGCACATTAATTCGGTTTCACATTTTATTGTTTCTATACAC
AAAGCTTTCCTTGTCTGATGTATAGCAAGAAAATGTCCAATCATTTCTCTAGCATCTGAA
GCCTAGTCCTGAAGGCAATATCTGTCATTTGCCGGCTCAAGCTAGCATCTGAAAAGTGAG
CCTCATTGATCATGCAGTTGAAAACTTCGATATACAAAATATGTTTTCTCAAAGAATTTA
ATAAGAACCACTATCTCTTATCTCTTATACTTCTCTTATCTCTTATACTACATGAAGAAC
ACGTAAGGTTCTCTCACCCGTGATATGTCAATATTTTCGTTCGACTCCTCTTGTCCCACT
CCCCATGTACCCTCCCACCCCATCGCTCCATCTGTTTTGGCATCCCCACGTGACAGCACA
CGATTTCACGTGACCGACCTAATCAGCCTGTCACTAGTAATACTACCTTAAAACTTGTAA
GGTTCTCTCTCCCATCATACGCCAATTTTTTCGCTCGAATCCTCTAGTCCCACTCCACAC
ATACCCTCCCACTCCATCTCTACATCCGTTTTCCCATCCACACCTGACAACACACGATTT
TCATCTGACTGGCCTAATCAAGCAGTCACTGGTAACTTAATAAGTCTTTGGTATCTTTGG
CAACCCGTAAATTCGGATTAATCTGTACAAATCCAACAACAACCAAACTTTGCTATCTTT
AGCAACCCATTAAATTCGGGTTAATGAGTACTAATAAATTTAGATTAATCTGTGTAACCA
AATAAATCTTTCATATATTTGGCAACCAATTAATTTGAATCAATCGATACAAATCAATCA
ACAATCAATCTTTGGTAACACATTAAATTCCGGTCAACTCGTACAAAGCAATCAACAACT
ACATTATACTAGTTGAGTGGCCATGTGTTGCCACGGACTAACAATGCAATATACATGTAC
ATTATTGACTAAGAAGATACGTGTAGAACACAATGTCAATACAATTTCTCACTATGTTTT
TTTTGAATGGTCACCGGGAGGGGAATCCTCCCCACCTTAATATATTGCTCAAAAAGCCGC
CAAAGCCATGCGCTGACCATTAAGCTTTCGTTGATTCAGTTTATAAGGGAAACATGATGG
AACACCTGAGCAAGTTGGTCTGTTTATGAGGGAAACCGGACCGAAAAACATACAAGTAAC
AATTGTAAAGGAAGAATAAAGTAAAAAGACACCCAAGATAGGGCATGCCTAGCTAACACA
CAAGACGAACATCACTAAGAAAGACACAAGTAGATGTGAAGTGTTTTCGAGTGTTCGCAA
TACCTTGACTTTATGACAAGCCTAATGCAATGAAGTGGCATGCGTGGAGAGTCCTATGGC
GCAACTCACGAGCATCCACAACCAATGAGTGCAACTAAACACGAACCTTTACTGGCAGCT
CTGCCATGAAAATTTGAAATGATTAGCAATCTGGGGGGGCATCTTGCACCATCAATGAGC
AAAGATGAAACAAGACATCACCAAAAGCACGAAGCTCGCCACAACACATCGACAACCGTG
GGAGGGTCTTGAGCATGAACAACAACAGAGGCGAGACACCTTGACAAGGGGAAATAGATG
GTCATCCTGTGGCACCAAAAGCACCGCCTCCTAACCCCATAGAACACCACCGAACAACCA
CCGTCGACCGCAAGCGGGTGCAACACCACACCACCATTACCGTGATGAGCAACATACAGT
CATCAATAATGCATCCCTTCCATGTTTTTTTAAAGTTTGGTTACCAAAAACAACTTACAC
CTTGCTTCCACCTCCACAAGATGCATCTCTTTCCGTATTCACCTGTATCTCCTATCATCT
CTATTCATAAGACATTGTCTCCATGTCCAACTATGTTGATGTTGCATCCTTGTTGTGGTG
CTCATTCATGCTACCTCTAAATGTGTGATTGTACTCTTCAACTATAGAGGCGGTTCCCAT
CACCTCTTTGATGGGTGGATGTACATTAATTGTCTTATTTTAGTATTGATAATGAAGTGA
AAACATACATGGTAAATAGCCCCATTCATCACAATGTATTCAACAATCAGGTCACAAGAA
CTTTGAACAAGGACAATGGTACGGGCGGCGGCTTGGAGTGAGTTGTTGGCAAATTCGCAT
GACTTTCATACAATTGACGAAGACGTGCTTGTCGAAAATTTTGTGTTGATTTAATCTTTC
TTTGAACAGTAACCAAGCACGACATCTCTAGATGAGATTGGCATGATCACACTCCACGTT
CATATCCCATATAGGACGATACATGCTATTTTAAAGAGATAAAAATAATATAGCGAAAGG
ATTCGCTAGCTATATATGCATGCATCTATTCGACAAAAACAATGATGTTGGCACTTCAAA
TATTAATTCTACTGGTAAGAGAGGGTGGGTGATCTATGATTCGGAACACAACATCATTTC
TTAAGTTCTAATTTTCTTCAGAGCATTGAGGGAGGCACCTCCACCTAAATGAAAATTTTG
AGGTTGGCCTTGGCATATCAACAACCCATAAGCCCTCGAAGCAAGTAGGCGTGGGTTGTT
GTCAAATCCGCATGATTTTTATCGAGAGGCCTCTCGCAAAAGAATATCAACCAGTAGTGC
CATCTGACATCTTTACCGAGGGGGGTTCTCGGCAAACACGACGCTCGGCATATATAACAA
ACCCACATGTGAGGCGCTGGCCACGTGGCGCTTCCCTATTGGCTAACTTTACCGAGGGAG
ACTCTCGGCAACCCGACGCTCGACGGACCCACATGTCAGTTGTCTAACACATGGCGCTTT
CCTATTGGGTACCTTTGCCGAGTTCATCTCTCGGCAAACATGGTGCTCGGCGTAGCATGC
GGTGTTGGGGAACGTTGCATGGGAAACAATATTTTTCCTACGCACACGAAGNNCTATCAT
GGTGTTGTTCATCTACGAGGGGAGATTAGATCCACATACCCTTATAGATCGCTAAGAGGG
AAGCGTTAA