Contig Data
morexGenes
Links



Map Locations of contig_2546854 (3792 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2546854

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36469 2 1247 bp MLOC_36469.2 Available Available LOC_Os04g49370.1, FRAME:-2, EVALUE:8e-31, 13104.m05039 protein expressed protein





CDS Structure of MLOC_36469






Contig Sequence (3792 bp)

>contig_2546854 3792 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCACATACACGTGCGCGAAGTGGAAGTTCAACGTACACTTAATGT
TGTGTGTTGTTTCTTCCCTTTGATCTTCGATCTCTTATGTTCTTGTTGGTGGCTAAACTA
CGTTGTTTGGATCTCTTATGTTCTTGTTGGTGGCTAAACTACGTTGTTTGCTTCCAGTGT
AATCTATGGATATGTATCACTTGAATTTATTCAATACATTGACATTCGAAATGTTGAAAT
GTATTTTTTTGTGAAAACAACTATTAAAATGTATATCTTTAAACATCAAGCCTTTAATGT
TGTTGGAATGAAGTTGAAATAAGATTACATCTACAATAAGATGAGAAAAAAATGCAAAAG
AACAATTCTAGGAGTTAAGTTTTAGGGATGGATTGGAAATCAACTTTCCAATACACTGAA
TTTTTGGGGAGTTTAAATTTTGGGACTGGGTTTTGAAAGTTAAATTCGGGAGTGGGGTTT
AATACTCTAATTAAGTTTTGAGATCCATTAGAGTTGCCCTTAAATCCAATTAATACTACA
TGCAGAAGAACATGCTCCCTTCATTTCTTAAAATAAGGTTTCTTTTAATATTTCATTAGG
ATACAACATACTTCCTCCGTCCTAAAATAACTGTCTCAATTTTGTACCAGAGTTGGCACA
AAATTGTATAAAATAAAATGAATGAATTTATATTTTAAAATATATCTATATAGATCTGTA
TGTAATCTCTTAATGAATCTATAAAAAGACTTGTATTTAAAACGGAGGAAGTATATTAAC
TATATTGTCAAGATTTAATGTTAAATCTAACTTGAACAAAAGACCAGTGATGAACATTAG
ACTTGTTAAGTGCAGTGAGAGTAGATACCGAACAAGGCATGCTTCTCATTTCTGTTCTGT
ATTTACACATCCATCGACTAAAGCAGGCCACCTTCCGGTCAGTTACCATGTCAAAATCCA
CGTAACAACCCGCACCTACTGCTCTCTGTGAAGCCTGAACACGCCACAACCGACGCGACT
AACCAAATCTGTGGGCGAAATCTCCTAGACGAACAGCGGAGCCCGCACGGGCAGGCCCTT
GGGCCTCGCCGCGCTGGCCGTCAGCGGCCGGAGCGCCGGCGCCCCGCCGAGCACGGACAG
CCGCCGCCCTTTGGACACCTTCTTGAAGGCCGCGGCATTGTGCCGCGCGAAGCGCCCGCG
GTGCGTGTCCTGCAGCCCGACCTCGCAGCTCCGCGACGTCCTGATCCGCTTGCCCGGCGG
CTTGGCCAGGTCCGCCAGGCCGCCCACCGCCGCCAGCGACGCGAACGACTGCGACTTGCC
GTCGAAGAACTTGGACAGGCCCCTCCTGCGGCAAGAGAAAAAGGAACCCCATGTCAGTCA
GACCACGGCTCCGAGATCAAGATCGAGCCTCGGAAGAGAGAACTGCGGCGTCCGGTCCGG
CCAGAGACGACGTACTTGAGCGGCAGCTGCGCCATGAGGGAAGACATCTCGAAGTTGTCG
GTGGATCCCGAGGAGCTGGAGCTGGAGGTGGCGTCGTCGTCGAGGTCGAGCTCCTCGTCC
GACGACACCGCCGACATCTGGGACCCGGACGGGCAGCCGATGTCCTCCTCCTGCTCCCTC
CTCCCGTTGCTCCGTGCGAACAGCATGTAAGCCTCCATCTCCCGCGCAGATCACACGATC
ACAACGACGCAACGCACGAAACCAAACGATGGACGCAGCGTAAAAGGCTGGAGTTCAATC
ACGGGTGCTGGGAGGATGATGGGTTGGAGGACGGAACGGGGGGGATCGGAAGCTATAAAG
GTAACGGGGGGGTGGGGAGGAGGATAAGAATGAATGACGAGCCGTGGCAGCGGATGCGCG
CGGGACGGGATAAAGAAGTCAGTTCGTATAGAAGGAATTAAAAAAAGAAGATGATAAATA
CGGGCGGGCGCGATGGTTATCATCTCGGCGACAAGGCTCCGTGGAGGGTCGACGGGGGAG
GAGGAGGAGGAGATAAGGCATCCACGTAGTATTTTCCTTGCACGGCTTTGCAAGATGCGA
CGGGTCTGCGCACTGTGGGAGGTGTGTCCCCCTTTCCGCAGGCGTGCCGACCGTCCCCAT
CCGGTGGAGCAGGGAACCTGGGGATGTATGTACGGATGTTTTTTTACAGAGTGTAATCGA
AATCATTTACATACACGAACACGAACGTATACTCAGGTGGTGCTTCTTTTTAAGGGACTA
GACTTTTTTATTTACAGGGATTAAAGAAAAAAGTTTTTTCAATAAAGTCTTTTCCTAGTC
CCTTAAGGAAAGTCCCTCCTGTTTCTTTACCTATGGACTAAAAGGGACTTTTTAGTCTAG
TCCTTAGTTAAAGAAACACCACCTAATTCTTATGAACACACGCACGTACACCCTACCCTT
ATAAACATTTTCACGAGACTAGATCGGCACATCATTTTGAGATTGACGAAGTCGTCACTA
ACGTCTTCATTGTCGACGGAAACATCTCCTCCCACTGAAAGCACATCGTCGAAAAACCTG
GAATAAATCCAAAAAATGAAAGCACTAACGTCAAGTCTAAAATTTAAATTCTGATAGCTA
GGGGATATCACAGTTCTCCTAAGTATCCAACCACAGGTCGGTTTGGTGTATGGATGCTTC
TTGTATAGTGGAGTTGCAGTACGTTTTTGGCTACGTGTTCTGGCCGTCGGATCCTTATCT
TTACTGTCAGACGGCTCTGATGGGAGTAGAATGCTTTAGCAGTTGACGATGCTCGGATTG
GCTGGATATACGGGACTGCAGCATACTTCATTTTCTTATCTTTCCTTTGTGTCAAGACGA
CAGAGTCTCGTGGAATATGTGTGTGATGGTGATATTAAAGGTGTTCTCCGAGCGGACCTA
ATTAATTTGCTTATCTCAGCCAACTCTAGGTAGAGCCTAATATCATAGAACTCTACTTAA
GCACACCTTGCACAAACTCTTGAATCGACAATCGCGTCGATGATTCATTTGAAAAAGAAA
AAGAATTTTAAATGCGGACATTGCATGCGTGGGATGGCTTCTACTACAAATTTGAGGAGA
ATTTCTTTTCCTCCAGCGGATAATGAAAAAAAAATCAACCACTAATTCTCATGATAACAT
GATCTTATCAAGAATTGAAAACAATCGTTTTTGTCCATACCCACATTGGCAGGCCGATTC
AAATATTTGTCATGAGGGCTTTAGTTAAAATATTCAGAGTTGTCAAATTTACTCCTTGCC
TTTTAATACTTTTCTATTGAGACTAAAAAAGATGTATCATAGGGTTGGATGGACCGAAGC
AAGATGAGACTGTGGCATTACCGGCCAGGGCTTAGATGTAACGCCCAAGATGTGATCCTA
TCCTTATTTTGACGCGAGGACCTCGACAGGGATAGGAACGCATCTCGTCATTTCGTAAAA
ATGGATATCGTTATAAGTACATGTATTGAAAAGATGAGTATGAGGAGTTGACTTACACTC
GTCACAAGCTACATCAGAGTCACATCAGTATATATCATACAATCATCGTGAAGAAGAGCA
GGGTCCGTCTATGGATGAAAACAAGCGATAAAAGAACAACGACTGTCGGTCTCGAACCCA
TCCTAGATTGACGACGACGAAGAAGAAGAAACTCCNNNTGAACAATCATCGCGCTCACGC
CTTAATATCAGCTTACATGTACCTGCAACTGGTGTTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAAGGTATCATGACTAGCAAAGCTTAACGGGTGGGGTATGGT
TAAGTGGTGAGG