Map Locations of contig_2546851 (4001 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2546851

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36465 1 2269 bp AK357652 Available Available None





CDS Structure of MLOC_36465






Contig Sequence (4001 bp)

>contig_2546851 4001 assembly3_WGSMorex_rbca.fasta
TTTTGGGACAGAGGGAGTAGTTTGTTTCAGAAAATGAGTTAAATGTATCAGCGTATTGCC
ATTTTTGGAATAATTTATCTGTGTGCCATAAACATACCTGTATTGATGCGGCAAGTCCCA
ACTAGCACAACCTTCCCATATTATGTTGTTTGACTTGTAAGTATTATTGTCCTTGGGCCT
TAATTCTCTTTTCTGTTGCAGGAGCCACTGGTGGGGCAATGGATGCTGGTAACCTGTTGA
AACCAATGTTAGGCCGTGGGGAACTCCGTTGCATTGGGGCAACAACATTAGATGAGTACA
GGAAGTACATCGAGAAAGATGCTGCTCTTGAGCGTAGGTTCCAGCAGGTTTACTGTGGTG
AACCAGCAGTTGAGGATACAGTTTCTATACTACGTGGCCTACGAGAGCGGTATGAGATGC
ATCATGGTGTTAAGATATCAGATGGTGCTCTTGTTGCTGCAGCTGTTTTATCAGATCGCT
ACATCACTGGACGATTTTTGCCTGACAAAGGTACTGCATATACTACTATTATGGAACAAC
TACTGGGAGCTAGGGGCTAATTCGTTCCGTCTTATATGTATTTATCTTTCCGTGTGCAGC
TATTGATCTAGTTGATGAAGCGGCAGCTAAATTGAAAATGGAGATTACATCAAAACCTAT
TGAGTTGGATGAGGTTGACAGGGAAATCATAAGGTTTGAAATGGAGAAGCTTTCATTGAA
GAATGATACTGACAAAGCCTCCAAAGAACGACTAAGCAAGCTTGAAGCTGAACTAGAATC
CCTCAAGCAGAAGCAGAAAAACCTTTCAGAACACTGGGAGTACGAGAAATCGTTGATGAC
TCGTATAAAATCAATTAAGGAAGAGGTAGGTGCATGCATGTTCTGCTCTTGTTTTTTTGT
TGTTGTTGTTGCCACATTTGTGTCTCTAATTCTGATCTTTTATCTGTGGTAGATTGACAG
AGTTAACCTGGAGATTGAAGCCGCTGAGAGAGAATATAATTTGAGCCGGGCTGCTGAACT
CAAATATTCAACGCTTTTGACACTACAAAAACAGCTGGATGAGGCTGAGGAAAACCTGAC
TAAATTCCAGCAGTCAGGAAAGTCGATGCTTCGAGAAGAGGTGACTGATGTTGATATTGC
TGAGATAGTTAGCAAGTGGACTGGTATTCCAGTGTCAAATCTTCAACAATCAGATAGGGA
AAAGCTGCTGCTACTGGAGGATGTACTCCACAAGAGGGTTATTGGCCAAGATATTGCAGT
CAAGTCAGTAGCTAATGCAATCCGTCGTTCTAGGGCAGGCCTATCGGACCCTAACCGTCC
AATTGCAAGCTTCATGTTCATGGGTCCTACAGGTGTAGGCAAGACCGAGCTGGGAAAGAC
ACTAGCTGAATTCCTTTTCAACACTGAGAACGCCTTGATACGGATTGACATGAGTGAGTA
CATGGAGAAGCATGCTGTTTCTCGCTTGGTTGGAGCACCACCGGGATACGTAGGTTATGA
AGAAGGGGGGCAACTTTCAGAAGCTGTTCGTCGAAGGCCTTACTCTGTCGTTCTGTTTGA
TGAGATTGAGAAGGCACACCAAGATGTCTTCAACATCTTGTTGCAACTGTTGGACGATGG
AAGAATAACTGATTCCCAGGGCAGAACAGTGAGCTTCACCAACTGTGTGATCATCATGAC
CTCCAACATTGGCTCCCCACTGATTCTAGACACACTCAGAAACACAACAGACAGCAAGGA
TGCGGTGTATGAGGTAATGAAGAAGCAGGTGACTGAGATTGCTCGGCAGACATTCCGACC
AGAGTTCCTGAACAGGATAGATGAATACATTGTGTTCCAACCGCTGGACTCGACAGAGAT
AAATCGCATTGTGGAGATACAGGTAAAAGCCTTATAATTCCTTTACATGCAAATTTGCTT
GATCTACTTGAGTCATGGAACTAAGTTCACCTAGTTGTATTTCACTGTCTGACTCCCGTT
GACCTGATCACAATTATAAATTTGTCGAACTTGCAGCTGGATCGGGTCAAAAACCGGTTG
CTGCAACAGAAGATTCACCTTCAGTACACACCGGAAGCTGTGGAGCATCTCGGCGCTCTT
GGCTTTGACCCTAACTACGGTGCTAGGCCTGTCAAGAGGGTGATCCAGCAGATGGTGGAG
AACGAGATAGCTCTTGCTGTCCTCAAGGGTGACTTCAAGGAGGATGATACCGTTGTGGTG
GATGTAAGCTCTGTGTCGATTGCCAAAGGCTTTGCTCCAAAGAAGCAGCTGGTCCTTCAG
AGGTTAGAAAGCGGAAACACAGAGTTGGTTGCCAATGTCTGAGGCATTGTGACTTTAGCG
TAATATTTCGTTAGGTCTTGAGGTTTATGTAGTGAGAACCTTTCACCAGGAAATGCATGA
ATGGGAGTTGTCCCCTCTTTGTTCTGGTTTCGTGGAATCCACATAAATTGTGTCTCGCGG
CATGGCCTATGTCAACGTGCAAAGCATGACCACTAAAAGTCGTTCTGTATATAACTCGGC
ATGGCCCATGTCAACGTGCAAAGCATGACCACTAAGCCGTTCTGTATATAATTAAATATC
ACTCTGTTCCTTTGAGGTTTTAGATTTGTCAAAAATGTTTTCGACGATGGGGGGTCTTGG
CGGAAGTCTAGGCAGGGCAAGCAAGAAATCATGCCGTATTGCACTCATATGACCATATTC
AAATGACCAAATCGGTGCTTCTTTTTGACGATGGGGGGTCTTGGTGGGAGCGTGGCGAGG
GAAGAGTTGGTAGTCGAGGTTTGATTGCCGGGTCACCGGTGTAAAATCCTACCCTCCACA
ACCCAACTGAATTCCTCGACGAGGTTCATCATTCATTGTGATGATAAACCCTCCGAGATG
GCGAAGACAACATATACCCAAAATATGAACCCAACTGAATTCCTCGACGAGGTTCAGCAT
TCATTGTGATGATAAACCCTCCTCGGGACGAGATGGCAAAGACAACATATACCCAAAATA
TAGGAGCCTTGGAGTTGGAATCACTGTAGTTGGACAACACCACGACAAAGCGGAAAGGAA
GATAAGAAAGAATTCTATGATTTTACAGAAACAACCAACAAAAGCTTTGCTAGCATCGAA
AGGAATTACAAGAAAATCCAAGAAGTTTGCAAAAGTTTACCGAAGAAGAGAGAATCGAGG
AAGAGTAGGAGGAGCAAGTACCACCTTCTGCACAAGAATGCGAGTTATGCTTTGCTTCAG
GGGCTACAATTTTTTTGCAATAAACATTTGAGTTCTTTATGATTAATGTGATTTTATGAG
CTATAAACACTTTCATTAATCTATATTTTGCTAGTTTCTTCGGTACCGTGCATTGTCTAC
TCTCACCTATGCATCGAATGAGGCGTATGTGTGATAGGCGGTAATATAATTTACACAATT
AGGGTGTTTTTATGGTTATTATATATGCATTGCTATTAATTTAGGGCATATAAATAAGTT
AACTATGAGATACTGTCATTTGAATATGGTCTCTTTGGCATATGAGTGCAATATGGCATG
ATTTCTTGCTTGCCCTGCCTAGACTTCCACTTATGTCCTACGCGGGGCGTTTGGCCATCG
CCTAGCGCCCAAGCATGTCTAAGTGCCTGATACGTCCCAAACGTATTTATAATTTTTGAT
TATTTCATGCTTTTTTGGTGACATTGTTATATGTTTGCTACACTTTCATACCTTTTTACA
CATATTTAGACTAATCTACTAACTCAGTGCATCCAATGCCAGTTTCTGTTTGCTGATGTC
TTTTTTTGCAGGGACTTTTACCCCAATTTGCAGAGCCCAAAAAATTCCAAAAGAATTATG
TAAAAATCAGCGTGACGGAAGCTTCACGAAGCACCAAGATGGGCCAGAGGGGAGCCATGC
CTCACCAAGGCGGCCACCTGGCGCGGGCCCCCTCCTGGCCGCGCCACCAGGTCGCATGGG
CGGCTGGTCCACCCCCTGGCGCCCTCCTTCGGCCTATATTT