| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_2546773
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_36421 |
1 |
634 bp |
MLOC_36421.1 |
Available |
Available |
LOC_Os05g46570.1, FRAME:-1, EVALUE:7e-33, 13105.m04976 protein WD domain, G-beta repeat domain containing protein, expressed |
| MLOC_36420 |
1 |
1423 bp |
MLOC_36420.1 |
Available |
Available |
LOC_Os05g46580.1, FRAME:+2, EVALUE:0.0, 13105.m04977 protein polyprenyl synthetase, putative, expressed |
CDS Structure of MLOC_36421
CDS Structure of MLOC_36420
Contig Sequence (4649 bp)
>contig_2546773 4649 assembly3_WGSMorex_rbca.fasta
GGACACCAAGGCGGCGTTCGCGCGGATCTACGACGCGCTCAAGGAGGAGCTGCTCAGGGA
CCCCGCCTTCGACTACACCGAGTCGTCGCACCAGTGGATCGACCGCGTAATGCTCCTCCT
CCTCCTCTGCTCTCACTGTCCTCCGCGTTCCTTCCTCCTGCTGGCTCCAGCTCCGTTTTC
CTTGCTGGCTTCTGCTGGGGTTTGCCATCATTAGGATTTGACTCGGGCCGGATCAGCTGG
CGCGAGATCGGCTCCTTGATGGATGGGTGGGTGGGAGCGCAATCAATTCGACATACTGGT
AGTACTAGTAGTAGCAGTAGTGCGTTGGGTTGCTGCGCAAGGCTGAATCAGCAGTTAATT
TGGCTCAGTACCAAAGGCTGCATCATATTTAGTAGTAAGTGCAGAAACGAAAATCTCGAG
CTCCTGCACGGTTCATAAGTAGAATTAAATGCTTTCCAGTTGCAGCTCATCCGCTGGAAG
GCTGTTCTAGGTTAAGACGAAGATGGTGCTCACAAGTTATTGCTAGTATAGTCAAAATCC
GAAATACAAAGTGTCAGATACGTAACCGTTTCTGCTAGGTTCAAGTTCTTCGAAGTGGAT
TATTATACTGTTACATTAAAACAGAGCATGCGTGGTCATTATTTACTTCTATATACGTGG
AGATCCACTTCCCTGTCATTAATGTGTAGGTATGGTGTTGGATCTTGCATGATGTTTTTT
ATTTTTTTATGTTAGTTCTCAGTAAGATACTCCAGAGACTAGATGAAAAATGATCTTCTT
ATTAGTTCAGTTCTGCTATTTTAACGTACATGCCATTATTTTCCTTTTTTGGAGCAGATG
CTGGACTACAATGTACTGGGAGGTGAGGAGATGAATTCGAGCTAAAGGTTTTCTTCTCAA
GTAGTACTACAAGAAGCTACCGCGTTTCTAATCCGTTGTTGTTGCTAATGATAGGAAAAT
GCAACCGTGGGCTCTCCGTGGTCGATAGCTATAAGCTGTTGAAAGGTGTGGATGCTCTTA
CTGAGGAGGAGATGTTTCTTGCCTCCACTCTCGGTTGGTGCATTGAATGGGTAATTCCTC
GTCTCTCAGTGTTGCTCTGGTGAATTTGAAGCAACCAAAATCACCCCCCTTAAGACTTGC
TGCTGTCTGTGTAGCTTCAAGCCTTCTTTCTTGTGCTCGACGATATCATGGACGACTCCC
ACACTCGACGTGGGCAGCCTTGTTGGTTTAGGGTGCCTCAGGTTTGTGAAAACTAAATTG
GCCTTTCCAGCTACAGTGCTCAAAAAACTCATTTGTTTTTTGTTCAAGAACATTCTGTAG
TCCCTTCTTTCCAATGTTACAAATAAACTTATCCCTAGCGCTGCCCTTTTCTGATAAACT
AGGTTGGCTTCATTGCTGTAAATGATGGGATCCTCCTTCGCAACCATATTTCGAGAATGC
TTCGGCTTCACTTTAAGAAGAAGCCTTACTATGCCGATCTCCTTGATTTATTCAACGAGG
TAAGTAAATATTATGCTGAGGAAACATGTGCAGTCTGAACTTGTGGATCATTACAGGTGG
TGATTACCTTGTCATGTTTTACCAGGTTGAGTTCAAGACAGCTTCTGGTCAAATGCTGGA
CCTTATTACAACCCACGAGGGAGAAAAAGATCTAACGAAATATAACATTGGAGTGTAAGT
TAATGTTGTGACAACTCTGACATAAAAGTTCTTTAGCATGCTTCATCACACATAAATTTA
GGAGCATAAGTCTTCTTTTGTTGTCTGATATTTCTTGTTAATAATCAGTATGTGATAATA
CCCTTTGTTTATTGTTAATATGAACCTCCGATATTTTTGCAGTCACCGCCGAATTGTTCA
ATTCAAGACAGCCTACTATTCATTTTATTTGCCGGTAATACGAACATCATATATTCTCTT
TTATCTTCTATGTACACATATCTGTTTTGGCAATTGATACTGGATTCAACTGGTACTGAT
ATGCTGCTTTATGAAAGGTTGCATGTGCGCTGCTACTCTCAGGTGAAAACTTGGAGAACT
ACGGTGCTGTAGAGAACATACTTGTTGAGATGGGAACTTACTTCCAAGTTCAGGTAACTC
CTACTTTTGCTACACATTTATGATATGAATCTTTTGGGTTGCGACCACCATTAGTCCACT
TAGCATTAATATACATTTTCTTATTACAGGATGATTATCTAGATTGTTATGGTGATCCCG
AATTTATTGGCAAGGTTAGTGTATTACTGCATGTGCCTGTTTCAAAATGAATGACAATTG
TTATATTGTTGATATGTTCTATTTAGCTCTTGCAATTTGATCAATGTTGAGTCTTACAAT
AGATTGGCACCGACATTGAAGATTACAAGTGCTCCTGGCTAGTTGTCCAAGCTCTTGAGC
GTGCTGACGAGAGCCAAAAGAGCATTCTATTTGTAAGTCACCTGTGCACTACTTTGCCCT
TTGGAAAAATATGGAGGCTGTTACTGAACAGTTGATGCTCCTACAGGAAAACTATGGAAA
GAAAGATCCAGCATGTGTGGCAAAAGTGAAGGATCTCTACAAAGAACTTAACCTTGAGGT
TTGTCTTAACTCTTAATCCGCTTGTATATTTATATGTGGACTGTAATGGCTTTAGTGTAG
GACTATGAATCAGAATATGACGCATCAATCCATCTCATTCACTTAACCATGTTTAGTTTT
GATCAACATGCACAAAGGAAATGTTTTACTGAATATTCATCAAAGTAACATTTTCCCACT
TATCTTTGAAAACCAAAACTTCATTTGATGGGCCTTCACTCCTCATGCACTCCCTATGAA
CAATTATTTACTATAGTATGCTTAAACTGGTCTAAAATGATGACCGGAAAACTCATTGCT
GGACCTGTCAAAATAGTCTACTTGTGTCTTATAATAAAGCTACTGAATTCTCATAGTCAA
CAAAATACGAGGTAATTGTCCACTGATGAAAACTTTTTGCTGGAGCGGTCAAAATAATGC
TGTGTCTCATATAATAAGAGCTACTGGCATTCTCACACTCAGCAAAATATGGCATTGTCT
AACCACCGGTTTGACTATTATTTATTGCAGGGGTTATTTCATGAGTATGAGAGCGAGAGC
TACAAGAAGCTGATCACTGATATCGAAGCCCAGCCAAGCATTGCTGTTCAGAAGGTTCTG
AAGTCCTTCTTGCACAAGATCTACAAGAGGCAGAAGTAGGGTTGCCTCTTCGACAGGAGA
TCTGTTCCGTCGTTGCATGTTTGATAGATGCATAGGGTGTTGAATCATGGTTTAGTGCTT
CATGTTGTATGTCGCGCCTTGCTGCCCCCAATAATAATGATGCAAGGCGCTATTCCGGGT
TTGATGGACCGCTTTGGTGTAGACTGATGGTTCTGTAATTTGCACCCTACCCTGTCGTTT
GGTCTTTTCTTGTATTGTTGCATTAGAGGAGTTAGCAGGTGTATTCCCATGGTAGTTCTT
CAAGTTACTGTTAAGGAAAATCATCAATGCTAAAATAGACATGAAATCAGGTGGATGTAA
GATGAATTTGTGCTCTTTTTTTTTACATGTAGCTGAATGCTTGGGATTACCCCCAAACCT
CCTCCAAGATACTGCAAATTTCTAGAGGTGAAGCTGCCATAGCTGTTCTGGTATCATTTA
ACTGTTTTACAGTTAGCATACCAACGCCGTTTAAAAGTCATCTAGCAGTGGTTTAAGTCA
ATGGCTTTTCTAAGAATAAAACCAGCAGTGGTTTAATTCATTGGCTTTTCTAAGAATAAC
AAAGCGACACGAAGGATCAGGTTCTCACGTAATGATAATGTCAACAAATGGAAGAGAAGG
TAATGCCCTCGTCATCTTGTGGTGATAAAGGAATCAGGAATCTGAGAGCTTTAGCAATAT
AAGAAGGGCAGCTTATAATATCCTAAGCAAAAGTGTACCCTGTTCTAGCAACAAAAGAAT
ATAGAACAAGTTCCCGATTCTCCAAGACAAATCCACTAGGATTAGCACAGAAGAAGAATT
TGGGGCCGATTTTTATGTACGGCGATAGAAACACAGGAGTATTATATGGTACATAAGAAA
TAAAGGGAGCACTTCAATATATTCTACAGGGAACCAACATCGGTGTTTCCACATATGGTA
ATAAAGCAAGTGATACTTCATACGTACATGATACCTGTCCTGTCAAGGAAAGAACATGCT
ACAACCCTTTTGTTAAGTTAGTGTATTCCACGTTCCATATTCCTTTTCAGGGACCTAACT
CGAACTGGATTCGTTGGGAATCCAGAAAGTCAGTGCGGTTGATGCTGTTGCGAACATTGC
TCGACGAGGGGCCCATTTCAAAGCAGTGATAGGACCAATATGAGTGTTCCAACAGGCAAT
CTGCAACAGGAAAAGAAACTAAGCCAACCGAACACACGCTATGTTCAACGTTTAAGACAG
AGGTACCTCCTGTACTGTATTGATGTTCCAAGCATGCAAGGTACCATCACCAGATCCTGC
AACATCAATGTGTATGTTAGAGCAAGTCTAGTAGAGCCCTCAAATCCTCAAACCCTTAAA
AATAACCGCTATTTACAGTTTTCGTCGAAAAAAAACGATAGACTAGAACCCCTAAACCCT
CAAACCCGTAAAAAAAATTAGAGGTCCAA
