Contig Data
morexGenes
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Map Locations of contig_2546691 (6613 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2546691

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36367 9 1458 bp AK364210 Available Available None
MLOC_36368 2 641 bp MLOC_36368.2 Available Available None





CDS Structure of MLOC_36367






CDS Structure of MLOC_36368






Contig Sequence (6613 bp)

>contig_2546691 6613 assembly3_WGSMorex_rbca.fasta
CTTCCGATCTACCCCTCCCCCCTCCCCGCCCTCTCTCTGGTGGTGTTGAGTGTACGCAGA
GTCAAAAGCGCTGAGTTAAAACTCGGGATCCAAGTGGGTGGCATGGCAGCAGGATCGATG
GCGTGCGTGGATGGCCGGCCGGCCGGCCGGCGCCGCCGTCGCGTCGGGTGGTTTTCTCCT
GTTTGCCTTTTTGCGGGGAAGGACGGGGTGGCAGTGGGGCTTCGTGGATGGATGGATGGA
TGCCGATTGCCGAATAGGGACGGCGGCTTCTGTTACGGCGTTTGCGTCGTGTGGTGGTTG
GTTGCGCCGGCGGATGGGGTTCCCTGCCTGACCAGAAATGGGCCATGTAAATCTGGTAAC
GTCGGTCGATACGGCCGAAGAAGAAAAAAAACCGTATTCTTTGCGTCACTCGCGTGCCTC
ATCATGCTGTTTGCCTGATTCCCGAACCGGCGTTTTTTTTGTTTTGAACGGGAGGAATAT
CTTCAGCATTATCGTCGGAAAGGAAGTATGTATCTTGAAACTATTCTTTTATTTTTTGAA
ATACGAGTAGTAGCAAATTTTTTGAAACTATTCTTTTACTCCCGTCCGTGATGTGTTGGG
TCGAGGCAGCCGTGGCCTGTCGTTGCGTTGCATCCTCCAACTTAGAGCGTGATGATTTGT
TCGATACCCGTCGCGCATTGATTGGTTTGTTCGCTTGCTTATTACAACTGCCCATCCCTT
GCTGCAGGTGGGCTCCATCGGACGGCCACAGTTGACCTTCCAGGCCCCGCCTCCGCGGCC
CGCCGGCCAGAGGCAACGGAAGAAAATGGTGAGCTCCTTCATCATCAAATACGTAACAGT
TACTGTATTACTGTACCGAAATACGTGGAAAAGTATTACGTGGCGTACACGCGCTTTGTT
TTACCGGTCTCGCTCGGCAAAAAGAGAGAGGGTCTGGCCATGACCCGGCGGCGAGCGCCA
CGCCACTAGTGTAGTCGTCACAAGGAAAAAGGCCGCAGTAGTGGTGGTTGAACTACATCA
GTGTACGTATACTAGTTTAGTTTATAATAAAGGAGCAGCACATCTCGGCCTGCCGTTCGA
AAGGGCGTGATGAGGGCTGGCTGAACAAGAAAGGGGGGAATCTTAGGGCCAAAGCCACAA
AAGCTGTACGTACCAGCCAAAAAGACCTGCTTCATCACCAAGATAGCCCCATGACCAAAA
AGCACAGGAATATAGCGATCCAGAGATTGTACATGATTTTGGGTCTGTTTCTTTCATGTC
TCTGTGCTCTGCCTTGATTTGTAGTAGCGCTGATGATTGGTTGCTGCCGCGATTTGCAGA
GGCTGCCGGAGGTCCAACAGCTGGTGCGGTCGCTCGCCGTGGAGAACGAGAGCCTACACG
AGGTGATGATAATGAGGATATGATCTTTTTAAAATTTACGCCTTTTCTTTAAGCATGCCA
CCACAAGCTTACTAACGAAGCGTCGGAACTTGTTTTTGGATTTTGAGCAGGAGATGCGGG
CTCTGCAGAGGGCTTGCTCCGCGCTGTCAAAAGAAAATGACAAGCTTGAGGTGAGCTTTC
TTATCTGTTTGTGATGTGTTCTTTTTCTGTCCCAGATAGGGTGTGCGGGCCGCCACCGAA
TGGGTTTCTTTCGGGCGGAATGGCTTATGAAAAATGCATCCTGTTCTGTTCTAGTTCTAG
CTTAAAGCATAAGCCTGGAGTTTTATATTGTTTTTTTTTTCTTTTTGAAACGGAGGGAGT
TTTATATTGTTATAGCGTGGGAGCTTTGTATGCCTCGGAAGTTAGTGGTCCATATGGTTC
CCGTTGATCTTTTTGTAAGCGCTTTAGTGTGTGGGCTATCCCCTCCTAAAGATGTTGTAG
GGCCTATTGGGCTGGTGGCTAGTGGCTTTTCTTTCATTTCATTTGCCATTTCGTTTCAGA
AGGATAAATAAAAACAAGGCTAGCGGTCGTTTTACATTGTTATTAAGTGGAAATATCTCT
CTTCTTTTCCTTTCTGGAAAACTTTTGGTACCTGTTCAGTTAACAAATGCATATCCAACC
AACAGTAACTCATTAGAGGTTTAAATGCTGTGGGTATTTAGCTAGATCAGTGTGCAATTT
CTGATTAAAATGGCACTATCAACTTCATTCACTCCAAGGATCCCTTCTTTACACCAAACA
CGTTTCTTTCTTTGCCTACATTCATGTCCAGTCCTTGCTAGTAGAACTGGACTGTAAACC
ATCTCAAACTCGGAGCTAATCTGGAGAGTTTTATTCCCCAAAACCAACTTGACATTTTTC
TTATCCGTATGAAGGATGAAGTGTACACGCGCAAAGATAAAATGCCTAGCTAAGTGATAA
GTGAACATTCATAACAAAATGTCCTTATACTCCCTCGGTAACTAAATATATGGCGTTTTC
GTTGAACTGCAAAAACGTCCTATATTTAGTTACATATAAATTGAACTGCAAAAATGTCTT
ATATTTAGTTACATAGGTTGTATCTTTCAACCCTTTTGAGGTTGTGGCTGCATTTGATAA
CTGGATTCAGGACGTTGGGAGGCCATGTGTGTGCTGAACACCTGTAACTTATACTGTACA
AAACATAACCAACTATAGAAGGGACAAATTCTAGAAATGGTAATTATTCAGCATTCACAT
TGTTTTAATATGTTTGTGCATACAACACACTACCATTAAAAGAAACTGTTTTTCTAAGCT
TTTAAAGATACTAGAGCTCACCTAACTCCATTTGGTTCAGTTCAACTGTAGTTGCAACCA
ACTGTGCTGGTCCCTCTTTACAATAAGAGAAAACTGGCAAAGAAAATTGATAGTGGAAGA
GATACTCTCCAGGAGAAACCTTGAAAGTAATTTGTTCTCTTAAACAAGTTGCCGTTTCTC
ATGCATATCGTCCTAAGTTCTCTTAATACAAAAACGTTTGGGGCCTATTGAGGTGTATTT
CTTGCTGATTAATCCTAGACCTTGCCTAGTGATATTAGCGGTCTAGTGACCATTTTATTT
TTATCTATGGCATATGTGGTAGGTGTGGTCTCCATCCCTATCCCTAGTACACCAGCCACG
TTTGTTTGGTATGGTGTAGCTGGCTTGGCCTTTCCTGGTAAACACGCGGACATGATATTA
GTAATAAGCAAAATGATGACTACACATTATTAAAGGATTAAATGCAGATACATCCAAGAA
AGCTTGTGGTTTATCCTTGTGCTGGTCTTGTAGATTTGAGATCATTGGACCAATGCTTTT
CTGCTAAAAATTAGTCAATGGTAGTCGAAGAATAGCTCCAATTTCCTTTTCTACTGTATT
CTCGTGTCGCTGTTGATGAATCCTTGTACTCTATATGCAATAATTCTTGTGAAAGATACA
TGCAGACATGATTTCCCCCTTCCATCCTAATAATTATGTCTGTGCTGTGGTGATAATAGG
CACATCTAACGGAAAAAAAATCTTGGCATTGTGCAGACAAGAATAGAGCAATCCAACTCA
CGGAATGAAGCCACATTGAAGGAGCACAAGGGAAAACAGCAGCTTGATCAGCAGCAGCAG
CAGTCCCCACATGACAGCTTCGCGCTACCAGATCTCAACCTTCCCGCACAGGACGGTGCC
GATGGGTCAGTCCACTGTTGAGAGCTCCAGACCACCGCGGCTTCGCTAACCGAATAACAA
AGTGTACATAGAGGTAGCAGGCTTAGCTAGACAAGGAGGGGCACCGCACGGGAGTGCCAT
CCAAAAAGAAAAGAATGGCACTGGTTTCATAAGTTTTTAGAATTTGTAGCTAAACAAAAC
GACTAATTTAGCTCATCTGCTAATTGTTTCTATATTTCATAGAGCTGAGGGGTGGTACAG
CTCAAACCGAGTCACGCCGTGTAGCCAATTTAGATGAGTTTATTATTCATGTTACTTTGT
TATAAGTGATGGAAATGTTATCTGTGCAGATTTGGTTACAGTATGAAGTGCTTGGTCACT
TGTTTATCTTTCTTTCTGATTCGGGCGAGAATGCCCTCGCGTATGTGGCGTGGCGTGGGT
GAACATGGTTATTGCAATACCAAGTCAGGAAGTAATAAGATTTGGACGATAAATTTAGTA
ATAAAATAGATGGAGAATGAGTATCAGCGTATCGCATTGGTATCCCTTTTCAAAACTTGG
CATGTTTCTTGCTCAGATGGATGGAAATTTGTAATCCGCTGCTGAACAGAAGCCTTGTCG
ATAGCATGGATCAGAGGACCCACGAAGTATCTGCTCTTGATGGGGGCGTAATTCATCCGA
CAGTTGGGAAGCAGGCAAGCTGGATGCGTGCAGAATGGATACAGAGATCCTCTAGGAGTG
TGTTTGGTTGCATTCTCATCTCAGTATAGTTATTCCCTCTTCGTTCATGCTCATCTCAAC
ACCCCTGTCATGCATGCTCCTAGTATATTTATGTTAGGTTAGTATGGACTCATGCACCAT
TCATACACTCTACCAAACACCCCAAAAAAAAACTTAGCCTCATACATTCTTCATGCACCC
TACCAACTCATGCTCAGATGAATGGAAATTTGTATCCGCTACTCAACTGAAGCCTGAAGC
CTGCTCGATAGCATGGATCATGGGACCCACGAAGTATCTGCTCTTGCCGACGGCGTAATT
CATCGGACAGTTGGGAACTAGACAAGCTGAATTGTTGAATGTCAGCGAACCACCAACAGC
TCTGGCCAACACTGAAGCAACACTAAAGGAGAAGGGAGCGACGAAGCCCAAGAAGCTGAC
GACCAAGGCCAGAAGAAGGCAGCGCTAGTAAAAAGGCCTAAGTCAACACGGCCCAGGAAC
TTACCCTCATGGCTTGCAAGCCCACACTGGGCCCGCTAATACGGGTGTAACTACTTATAC
GTTGTCTGTCCTCCGGACCAGGTAGCGGTGGAGTGGCGGCTCAGACATTCGCGTGAATGG
ATAGGATAGCGAGAGAGAGAGAAGAAGAAGAAGAAGAACTCCTCGTGTAATTTGAATTCC
TCTAGCACAATTTCCCCAGTTCGTCCTATCTAGCATGTGAGATCCAAGTTCCTCAAAGTT
GGTAATCAGACCCTTCGTCCTGGAGTTTTCGCTACATCGCCACCACACGAGGTTCCATGA
CCGTCGTCGGCATCAAGCTATGGAGGACCTCAGCGGCGAGGGTCGTGTCGTGTACCATCT
GCTTCGGCATGAGATCTCCACCGACTTTGATTTGAAGCTCAAGGCGCAAGAGGAATCGAT
TCTCGAGTCCATGAGCAGGATGCTGGAGGCCAACAACTCCACGCTCGTCGGCCTCATGTC
GGCACGGGCTGACACCATTCGCGACGAGGTCATGCTCGATCTCGAGCAGATCAAGGCGGA
CGTGAACAAGCTCGAGGCCGTAGATCCGGGTCCCAAGCAGGACGGGGGTTCGTCATCACG
CAACGTTGGGCAAGGTCGTGGCGGCGCCACCACCGACGCAATTAGTTACGACAACGAGCA
CCGGGGAAAGGCACATAATATATATGTCCCACCTCCGGCCAGAGGTGCGCGAAAATAAAA
TTCCTTCGCAAAAAATTTTGCGCCGCGCAATTCGTCTCTGACGATGCCACTAAACCATCT
CTATTTTTTTTGCAATTGGATATGACCAAATTTGATGGTACCAATCCCCAGCTGTGGAAA
AACCGATGTAAGGACCAATTTCGCCTTGGCAGTGTTGCTAGTTATCGATGGATTTCCTTG
GCCATTGCTCAATTTGAAGGGGGTGTTGCATGGTGGCTGGAATCAGTTCAACGCCGCATG
CCTCACTCCAACTGTCTGGATTTCGCACAACATTACACAACAGGTTCGGCCGCAACCAAC
ACCAAACTCTACTACACAAGTTGTTCCGTATAGCTCAGACAAGCACCATAGAAGATTATG
TTGAGCGTTTTGCTGAGTGGTATGATCAGTTGACAACTTATGAGGATACTCCAAATGCAT
TGCACTACACTACCAGATTCCTAGATGGGTTGAAACCAGGTGTGAGAATTGCAATTTCTT
TGCAGAAACCCAAAGACTTGGATGCTGCATATGAGTTGGCTCTGTTGCATGAGGAATTAG
GAAAATGCATCACACCAATTAATAGTTATTCTACTAGAAAGTGTCCACTATCTCCTCTAT
TGTTAGTCCTAGCAAGAAACTTCTTGACACTCCCAAAACACAACCTTTCGAGGACAAGTG
GTCTGCGCTACGTGAGTTTAGAAGATCTAAGGGTCTCTACTATGTGTGTGGTGAACGGTG
GTCCAAGGATCATGTTTGCAAGTCAACAATTCATCTGCATTTTGTCCAAGAGCTGACTCA
ACAGGTACAGTCAAGTGCACCTGAGGACCGTGAATCTTCTCATAGTGATCACCAAACTAG
TTCTACTTCTTCAGCGCATTCCATCAGGTTATCAACTGCTGCCTTAGGAAGGGAACCAGA
GGCCCGTGTCTTACAGCTAGAGGTGTTGCTTCAAGGCCAAAAGCTAAAATTCTTGGTTGA
CCCTGGCAGTACCCATTCCTTCTTGGATAATAAATATAAGTCACTACTTGGGGTCACTCC
TATTCCTCCAGTGAATGTTACTCTTGCACGGGTGTAATGCCCAAGATGCGGTCCTATCCT
TATTTTTGCGCGA