Map Locations of contig_2546597 (3765 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2546597

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36318 2 2223 bp AK363474 Available Available None





CDS Structure of MLOC_36318






Contig Sequence (3765 bp)

>contig_2546597 3765 assembly3_WGSMorex_rbca.fasta
TTTGGGACGGAGGGAGTATCAAATATCCACATGCAATAAATATACAGCCTAATATGCACA
TTTACTACTAGTTTTCTATGAACTTGATCATTTATCAAACATAAAATGTAACTTTTCAAA
AAAAAATAGTACACCTTATATAATCAAAATAATTATAGTGCAAAGTCATAAACTGCATTT
CTTAACTAGTACATGAGCCTAACAAAATAAATTGTTTGGTTTCTACCGATATAAATCCAT
ACACAATATGTAGTTCTGGAGAAAAATAGATCACATATTTGAGATGAAACAGTTTTCTTT
AATTCAAAATTTGAATTCTCTAGTTAAGCTATTTCAATTCCTGTTGTGGATAACATATTA
AACTATGTTGGGCATTCTATCAATATTTCATGAGTACACAAGGCATAACATACTTCCTTG
ACAATAACATATTTAACATATTATAACCAGAACCATGACTACCCTCAGAGCAAAAAAGAA
AGTTACCATTTAAAGGATCAGTAGCTCATTTAGTGCCAAGAAATATCAGATGAAATAAAG
AGGATAAGCAATTTCACAAAAGAGGAAACAAGGGAATGATCAATTGACTTGTCAGGCAGA
TTCAGCTAAATATAATGACCACACCACCGAAAATGCCCTTAGCAAGGATCAATAGCTCAT
TTAGTGCCAATAAATGCCAGATGAAATAAACAGGATGAAGGGACTTGGTACCGAGCAATT
TCACATAAAAGAGGAGACAAGGGAATGATCAATTGACCTGTCAGGCAGATTCAGCTAAAA
ATAATGACCACACCAACAAAAATGCCCTTAGCAAAACAACCGTCATTTGGATTTTCACCA
ACTATAATGAGAAAATGAGTCCGTTTTTCTGTATCTAAAAACCATAGTTAAAGAAGGTGT
GCCTAGCTTAAGTGCGCCTAGGGTCTAGGCGACGCCTAGCGCATAACTGCGCTTAATCTG
CGCATAAGCATGTGCTTTGGTCAGAAAAGCGCAAGGCAGTGGCAAAACGCACAATTAACG
CCTAGCGCTTTTTTGAACTATGCTTAAAACACATCAACTATAATGAGAAAATGAGAACAG
GCACAGGAATACTAACCTTCGTCGTCACTCTCATCCTCAAACTCATCCATCCCCATAGCA
CCCAAACCTTCCATACCAGGCGGCATGCCCATACCGCCCATTCCGCCCATCATACCAGCC
AAACCACCCATGCCACCCAAACCTTCCATGCCGGGCATACCGCCCATGCCGCCCAAACCT
TCCATTCCAGGCATACCACCCATGCCACCCATATTCTACAGAATGTACATGAAGCGCATC
ACACACCAAAGCATATAAATGAATCATCAAAGGGGAAAATGGGAATAGATATACTCACCG
AAAAGTCCATCCCATCAACATTAACATCAGCACCTGAAAAAACAAATGATGATTTTCAAC
ACATTTGCAAGGCAAAGTAATAATGTGTAGCAAATTCTGCAGTAAATAGATACAGCAGTT
TGATTTCTAGCCCATGATAGGCGATAGTTAAATGCCTAGCTCTTAATGTGAGCATAATTG
CTCTTAAACGTGCGCTTTGGTCAGAACTCAGAAAAACACAAGGCAGTGGCAAAACACACA
GTTAAAGCCTACCGCCTATTTAAACCTTTATCTAGCTTAAAACATAGAAAACTAAGTTGC
AAAAGTTAGTTGTCTACTAACAAGGTGTTCTGGTTTTCTCACTCTTTTGAAGACAACTGA
CAAATACCCTTCCTACTTAGAAGTAGGCGAGTGAAACAGTAAGATGAGAAGAGGCACCAA
AATAGATATGTCATACAAGTAAATTGGGATATGATGTTTTTAGTTACATGAAACAACAGT
ATGGGATAACTACAACGCCATCCAATGTTAAGCAGACCATGGGGCACATTTCCCACGTAT
TCAGGGCACTCGTTTTCTACCACTAAACTGTCTCCTGTTTACAGAAGTTTTAAAGTACAC
TCTTGGAACTAACAAGCAATACCTAAACAAGGCAGTGGCAGAACACACAATTAAGGTCTA
TCGCCTATTTAAACATTGTATCTAGCTTAAACATAGAAAATTAAGTTGCAAAAGTTGGTT
GTTTACTAACAAGGTCTTCTAGTTTTCTCTATCTTCTGAAGACAACAACAAATATCTTTC
CTACTTAGAACTAGGAGAGTGAAACAGTAAGTTGAGAAGAAACAGAAAAATAGATTTGTC
GTACAAGTAAGTTTGGATGTGATGTTTTCAGTTACATAAAGCAAGAATAGGGGATAACTA
CAACACCATCCAATGTTACGCAGACCATGGTGCACATTTCCCTGATATTCAGGGCACTCA
TTTTCTACCACTAAACTGCCTCCTGTTTCCAGAAGTTTGAAACTACACTCTTGGAATTAA
CAAGCAATAACTTAACAAGTATTGTCAATGTACTGCTTCTGTAAATAAACCCATTTTCGT
AGATAGCATACCATCATCATCTTCATCAACCCATTTGTCCCAATCAACTTTCACGAAGTG
TGGTGCCTTCTGATCATCTCGAACAAGCTTATTCCACCATTTGGCCTCGGCTTTTTCCAA
AATACAGAATATAGACCTGACACCAACACTTACTTTGCTTGCCTGTTGAAGACAGTGATA
CTGAATAAGCAAACAAACTTCTTTTGACAATTGAGAAGTCAACATCACAATAGCTACTAA
CATTGCAGTATAGTATGTAACTATGGACATTGATTACCTCGACGTTCACTTTGTCATTCA
AATCCAGTTTCGATTCATATGAGTTCCCATCAGTTCCAGCAGTGGCAAAGAAAGAGAATA
CACCATCAGGTTCCAGGTTGACCTTGGCATCCTTTGCGTCAGGCAATTGTACTGTGATAT
AAACCTTGTCAATCCTTTGAGCCCATCTGACTTCAGGGTGCCGACTACAGAAACATTGCC
ATTGTCAAGAATCGAACATCAATAGGGAAATCTATCTCTCCAAAAAATAACTAATTAAAA
TAATTTACAGCTGGCTTTGCATACAAAGAATATTTCATATATTGGCGCAAATGAAGTATC
ATAACTAAATGAACAGAACATGTATAAAGTGCAGCATTGGGCAATTCAACCAGACACAAA
TAAAAACAGAACACAACGACCCACTCAGATCACATGAACACACATTCCTCACTTTATATT
ATTAGTGTTTTCTGTAGCCTAAGCTATAAAAATATAACAAGATGATGGATGGCAAAGCAG
GTCCATGCATTCAATCAGAGAGAGCAATTAAAATAAACTCCACTCAGTGCATGCATAATA
CTATTTTAGTACAGCACTGAATATAAGGATAGCTAAATAAGCACTGGATATATATTACCC
CTTCCAACTCCAAAATGAAGGCCTATAAACATTCTATCAAGTCACACAGTGTAGTGTTGG
ACCAAGTTTGTAGGAAAAAGTATAAGCAACTATAATACTTAGGGGTAATAATATAAGAAT
ATATTCAATTGTGTACTGACACTAATTATATGGTGTACCTGTCTATAGTTGTTTTTTTAC
AAACTTGGTCAACATTGAATCGTTTGACTTTTTGAACCTTTGAATCATTTGACTTGACAA
CAAAATTATAGGCCTTATTTTTTGAGTCGAAAGGGTAGATACTTTGCAGTGACATTCTAT
TGTACTCCCTGTCTCAAAATGTAAGATGTTGATAGTCTCAAAAAACGTCTTGCATTTTGA
GACAGGGGGGGGGGGGGGGGGGGGGGGATTGTTGGGGGGGGGGGG