Contig Data
morexGenes
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Map Locations of contig_2546588 (4671 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2546588

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36316 2 1912 bp MLOC_36316.1 Available Available LOC_Os06g11800.1, FRAME:+3, EVALUE:0.0, 13106.m01281 protein annexin, putative, expressed





CDS Structure of MLOC_36316






Contig Sequence (4671 bp)

>contig_2546588 4671 assembly3_WGSMorex_rbca.fasta
GTTAATCCCTGCTTATGTCGGTTCTACGTTTGAGAACCGCTCCTCTGTAACCGTCTTTGT
ACCAGGGTATATATACCCACAAATTTATCAATGAAAGCAACCGTTTCATCATTTGCTCTC
TCTTTTTCCTTTTGCTTTTTACACGAGGTAGGCCGGGGAAGTGGAAGAAGAAGGCTCGGT
CGCTCTCGGTCGGCCTCGCTCGCGGCGACGGCCCAGCAGGCGAGCCCACGACGTTAACGG
CTTCTGCTGGTCGCCCAGAGTAGCCTTCAGCCCAGCCAGCGTGTACGATGGCTACCACTT
CACCAGGAGCTTGTCTCAAAAAAAAAGGAGCGACAAAACGGTCGCGACCATTCATACGTG
TTCATGGTGTACCGGCGACCCACCAACCTCCAAGCGAGTGCAGTCCAAATGACAAAAACA
GGGTGAAGCACACATGGCTGCCCCTCAGACCTCGGCCTCCCACGCCCAAAATGAGCTGTC
GTCTTTATTCACCCCCATCATTTTCTTATTCACCACGAGCTGTTTGCCTCAGCCAACTCC
ACGCTAAACTAAATCACACATTTCCATTAATCATCATCCCATCTCTGCTGCAGACTTAGC
GCCTAAGAAAGACTCCGACCCCGCGAGAGATGTTTCCAGGACAGCAGGCCGGCCCCGTGG
ATCACGCGCCCGTGCACTGCTGTAATCCAGATCGGGCAATCAGTCAGTGGCACCCCACTA
ATTACACGGCAGATGGCACCCCACCCCACCCACCCACGCAGTCGCATTCCTTAAACCCCT
CTTCTCCCCGTCCATTTTAATAGCCCCGGCCCCGCGGAAACGCGCAATCCATCGTCCATC
CATCCCTTCCCCCGCCCGACCTCGAGATCCCGCATCGCGTCGCGCGTCCGACCCCCCGGC
ACCGGCAGGCAGGCACCCGGTCCCGATGGCGACGCTCAAGGTCCCCTCCAACGTCCCCGC
CCTCGCCGACGACTGCGACAACCTCCGCAAGGCCTTCCAAGGTACTCTACTCCCACCCGC
CGCTAGCTCTCACCCCCGCGCGCTTCCGCCGTGCTCCGTGTGGCGCGGCACGACCGTCTG
ATCTGTCTGTCGGTTTTTTCTCTCTGTCCGTGCGCGCGTGCAGGGTGGGGCACGAACGAG
GCGCTCATCATCTCCATCCTGGGCCACCGCGACGCCGCGCAGCGCCGCGCCATCCGCAAG
CACTACGCCGACACCTACGGCGAGGAGCTGCTCCGGAGCATCACCGACGAGATCTCAGGC
GACTTCGAGGTACGCCTCTGACCAGCATGCCTTTTTTTTGTTCCCTCGCGCGTGTCCCCG
GGCCTTTCCAGATCCCTGACCGATCGGGTCGTTGGGAGCAGAGGGCTGTGATCCTGTGGA
CGCTGGACCCCGCGGAGCGGGACGCGGTGCTCGCCAACGAGACCGCCAAGAAGTGGCACC
CCGGGAACCCCGTGCTCGTCGAGATCGCCTGCTCGCGCGGCTCCGCGCAGCTCTTCGCCG
TCAGGCAGGCCTACCATGACCGCTTCAAGCGCTCGCTCGAGGAGGACGTCGCTGCGCACG
TCACCGGCGACTTCCGCAAGGTACAGCGTGTTGTCCGCTTCGTAGATGCCATGCTCTGCT
ACTATTATATACCAGCGCGTTCCTAATAAAATTGGGCTGCAATTACCCTGTGATAAAAAA
ATCACTCCGCTGTCATTTACAATGGATCTGCTCAATGGCAGTAAAAGGTTTATGGATCCA
AATATTCACTGGTGTGAAAGGAAATTACTGCGGATCCTTTTGTTGAAGGCTATGATCTGC
TCTTCTAGTGCAAAAACGATATGATAGTGCTCCTTCTGTTTTGCATGCTGTTAGTGTTAA
ATCATGAACCCTGAAATTTGAAAATTCAAAATGCATTATCCTATCCCTTTGGGCTATTCG
GATCAAATTCAATTGCGATGGTGACTTTGCTTACCTTGTTCCTGGACATTTGTGGAGATG
GAAATTTGTGCAGATGTAGATAATTTTGGCGAATTGAGGCCTGAAATTTCTTTATTCCTT
TCCAGCTCTTGGTGCCACTTGTAAGCTCATACCGCTATGAGGGACCAGAGGTCAACACAA
GGTTGGCACATTCAGAGGCCAAAATACTGCATGAGAAGATCGAGCATAAGGCTTACGGTG
ATGATGAGATCATCAGAATCCTCACCACCAGGAGCAAAGCTCAGCTGCTTGCAACACTCA
ATAACTACAATGACACATTTGGTCACCCAATCACCAAGGTGCATACATATCTTATGCCCT
GTTTTTTTTTTTACCTCTGTTAACTCTTCATTTCATTCTTCTATAGTTAAGTTAAGTCAA
CCAATAATGAAGATTAGCCTTGACCTGCTCTGCCAGTTAAGAGCATGTGTATTCAGGAAT
ACTTATTCTGCTGTTAGTCCTCAGCTGAATTTTTGATAAATTTTCGTGTGAATGCTGTTT
GGTTGGGCCGCTGTTGGTTTCGTTCTTCAAGACGGATGCATAATGTCGGTCCATGTTTAA
TCTTGTTAAACTTGAATATATTTTCCCGCAAAAAACTTGAATATATTCACATTCATCGCT
AGAGTTTCTGCCAGTTGTTGCTATTAGATTTATACCGTCATTCTGCTGTCTTGTATAGTT
TGGGAAGTTGGAACTTAATAGTGTGTGCCTGATGATTTGGCATATTTTACCAAAGAGAGT
AGCCAATCTTGTAAAGCTTCAATATCATGTGACTGGCCCAATCATTTGTATAGATGTTCT
TTTGTGCTATCTCAGTTCTTCTGTTTTGTTCTTACAGTTGGTGATATTTAGCCAAATTGC
ACCTATGACTTGTGTCAATATCTTGTTTAACCAATTGTTTCTAGTTTTGATTTATCTACC
AAAGGCCTGCTTTCATACAATCTCTACAATGTATCTTGCTTAACCAAAGACCTGCTTTCT
TACAGTTTCTGCAATATATGTTGCTTAACCAATCATTTATAGGTCTGTTTCATCCACCGA
AACCCTGCTTCTTACAGCCTCTGCTATTTACAGGATCTGAAGGCTGACCCCAAGGATGAG
TTCCTCAAAACCCTCCGGGCGGTTATCCGGTGCTTCACCTGCCCTGATAGGTACTTTGAG
AAGGTTGCCAGGTTGGCCATTGCAGGGAATGGAACCGATGAGAACTCCCTCACTAGGGTC
ATAACGACCCGCGCCGAGGTGGACCTGAAGCTGATCAAAGAGGCGTACCAGAAGAGGAAC
AGTGTCCCCCTGGAGAAGGCCGTCGCAGGCGACACCTCCGGCGACTACGAGACCATGCTC
CTTGCCCTCCTGGGGAAGGAGTGAGCCTTGCCTCTGTATCCACCCCCTGTTATCCTTTTC
ATATCTCAAATCAGAGAATAAACCCTGGTATGCAAGGCCGTTTTCAACGCTGGTTATGAT
CTGCTGCGCCTTGCATAACGGTGAGAATAAGATAGAGAGAGGTGTGCTTTACGATGAGTC
ATGCATGGTGATACGTTTTTGTACTAGCTTAGATGTTCATTCGCGTGTGAAATGCAGTGG
AGATGTTAAAAAAGTGAGTTTTCTGTAAGCCTGAAAAATCTGAATTGCATCTGTATTTTG
CTTGAATTGAATCGAGTACATCAGTTCCTAAATCTTTTAAAGAGGGAGAAGGTTATACTC
CATCTGTTCCTAAATATAAGTCTTTTCAGAAGTTTCATTAAAAGACTACATGCGGATGTA
TATAGACATACTTTAGAGTATAGATTCACTTATTTTGTTTCGTATGTAGTCCTCTAATGA
AATATCTCTCATTTGGGAGATGGAGCGAGTACGCAACATTTTGTCGCCGCTTCCAACCAC
CCATGATTGTCTGAATTAGTTATGCTTGAATTTGATGGAACTATTTTTTTTTGTAACGTA
GACGCAGATGCTCATATGTATGCACATACACTCATCACTATGAACACACTCATCACTATG
AACGTAACGCATGCATGCCCTACCCTTTCAGTAAGCATTTCCCAAAGACTGAACTAGTGC
ATCATCTTGAAATTGAAGAAGTCGTCACATACGCTTTTGTAGTCGACGAAAACATTTTCT
TCCACTGAACACATCGCTGAAAGGATTGAAATAAATCCAGAAATATATAAGCACCATTGT
CAAGTTTAGGATTTGAAATTGGCGGGTTGGAACTAGTTTAGCTTGTACTTCTTCTAGAAT
GTAGTAGGCTCAAGACTAATGTAGTTTTAATTAGCAAAGCCGATCAAAATCCTTTGTAAC
ACTAAGCTCTTTATATTTAAAGAGCCCACATTTAATTGGGGTAATTGAAATCGGGTTATC
GGATTTTGATCGGGTCAACAATTTCTTAAAGCTCTGTCATTCAACGAAAATCCATTTCTG
AGCCCAGGCTCATCTGCACCCGCGTTGAATAAAAACATCAAATCAAGTATTAAAAGAATT
TTAAAAAATCCATTTTTGCATGGTAAATAATTTGATGTGTAAGGTCCACTCCAACTGTTG
CATCATTTGGACTTCTGAGAAGCTCTCGACAAAAAAGACAAATTCACGACCTCTAAGAAT
GTTCAGTGTTCATGCATTTTTTGATATGATTTGTTTTTTTTTTAGTTGAGAGCTGCTCAG
ATGTCCTTGTCAAGCTGGTAGTTGGGGACTTAGTCCTCAATGTTATCAGCG