Map Locations of contig_2546565 (8702 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2546565

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36303 6 1865 bp AK360295 Available Available None





CDS Structure of MLOC_36303






Contig Sequence (8702 bp)

>contig_2546565 8702 assembly3_WGSMorex_rbca.fasta
GCCCCCGGCGGCGTCGCGCCGGTGCCACCCCACCCAAGGCGCTCGTAAGCCTTCTTCTCT
CTTCCCGCCGACCAGTTTTCAACCCTGAGCGATTTTGATCTTCGAGTCTTCTCAGCGCTT
CGTCGTTGATCTATTATTAGGATCCCTTTCCTGCTTCAATCTCTTGTATGTATGTATGTA
TGTATGTATAGGGTTGTAAAGCGCCACACGATATCGGTTTTTGTTGGGGATGAGAGTGGG
ATGATCAATCGGATTGCCGGGGTCTTCGCTAGAAGAGGGTACAACATTGAGTCGTTGGCA
GTTGGGCTGAACAAGGACAAGGCTCTGTTCACCATAGTGGTGTCAGGAACAGAGAAGATA
CTCACACAGGTCGTCGAGCAGCTCTACAAACTTGTCAATGTTATACAGGTCAGCATTTTC
TCTTCCAGTATCCCGTGAACATTGAATTTTTTTGCTAACTACTAATAGTAACATGTGATT
AATGGAATCATTCTGTTTCAGTTTTCGTGCTTGTTCCAGTCATCACAGTATCGGATATTT
ATAGTTTCATATATCGATTGAACAGGTTGACGATTTGTCAAAGGAACCACAAGTTGAAAG
AGAGCTCATGCTTATAAAACTAAATGTAGAGCCAGAACAGCGTCTCGAGGTATATAAACC
TATATCTGCTTTTTGCAAGCATATTGTCTAGAAATTTTAATTTGTGCATGTGATGCTCAA
TTTACATAGAGTATTTCAGTTCGAGAGGTAGTGGAAGTACAGTTTGGGCATTCTTTGCTT
ATTGAATACTTATACATGCAGGTGATGGGTTTGGTTGACATTTTCAGAGCCAAAGTGGTT
GATCTTTCAGACCATACACTAACTGTTGAGGTAAAATCCATGATGTGTCGTATCTTGCAG
ATCAATTACACTACCACTCATATATCTTTTATTAAAGCAAAGTATGCTCTCTGTTTTTGA
GTCATGCCAAAGGTAACTGGAGATCCTGGAAAGATTGCTGCTGTACAGAGGAACCTGAGC
AAATTCGGGATCAAAGAAGTTGCCAGAACTGGCAAGGTTATACTCCTTAGAAAGATTAAC
ACCATATCATGATTTCTTCTTGACTATATCTAATTGGCCTTACTAATGTAACAGATAGCT
TTGCGGCGTGAGAAAATGGGACAAACCGCTCCTTTTTGGAGGTTCTCGGTAGCTTCCTAT
CCTGATCTTGAAGTGAAAATGCCTTCAAAGTCTACACTAAGCACTGCAAAGGCAACCAGT
GGAGATTCTGAGGAATCATCCCAGGTATGGAATGATAATTCTTATCATTCATGTTATTCT
TGTAACATGCATTTATCTTTTCTTCGGCATTGCAACGGCACTGTCTCCATTTATTTTGAC
CTGGTTTATTGTGTTGTGTGAATTCTTTTTATGTATTCAACGGAAATCAACACGCGTAAT
ATAATATACTCTCTTCCATTCTTTATAATAAGAGTTGCTTTTTACTGAATTGATCTTGTT
GATTATTTCTTGCTGTTTTTTTTTCTTTCAATCTGATTTTGTAAGGGCAAAATAGTTTCT
GTAGATAATTTACCAATATTGATCCTTGCAAGTGCACCATATATGCAGTGAATACTGATT
TGATTAGCTAGATTATTCTATTTATGCCTATCAGTTTAGGACAAAAGCAGAAGTTGGTGC
ATTATTTAAATTGCTGTATCATTCCCAATACTCGCATTATGTCGAATGGTTAGTCTTAAT
TTGAAAGTAGTAAGAACTTTGCTTTCTTATAGAATAACTACAATTTCACAAACACTGGTT
AGAAATGACCTGGGCTATGTTTGTGTGAAGTGTGAACAAGTTTATTGCAAATACTTTTTG
CTCCAATTTGCAACAGCAGCTGTATGAATTTTATATACTATGTTCTTATTACTAGGGCGA
TGTTTATCCAGTGGAATCTTACGAAAGCTTCTCGATGAATCAAATTCTTGATGCTCATTG
GGGGGCCATGACTGACAGTGATGTAAGTTCTTGCATTCTTCTTTCACTAGAGCTGCTGTG
TTGCTGAAAATTAGTGGCAAGAGCCCTGAAGTGTACTTGAACACTGAAGTTGTTAAAATT
TGTTTGCATTGAACTAACAATTGCAATTTTAATATCCATTTGGAAAATAACTGGTATACT
TTTCTTTCTTTAGCCTACAGGGTTTTGTTCACATACTTTGTCGATCCTTGTGAATGATTC
CCCTGGAGTTCTTAATGTCGTAACGGGTGTCTTTGCCCGGAGAGGCTACAATATTCAGGT
TCATTTTCCGCTTATATTTATCTTATGTTGCCTCAGTTAGATCATTGCAGGTTACATGGT
TGCAGTAAATGCTTAAATGCTGTATCCATTATTTTGACAGAGTCTTGCTGTTGGCCCAGC
TGAAAAAATGGGCACTTCTCGCATCACCACCGTTGTTCCTGGAAATGATGAATCTATCGC
CAAGCTAGTACAACAACTTTATAAGCTCATTGATGTTTATGAGGTCAACTTATCAGTGTG
TGGTTTGTATGATTGTTGTTGCATATGTAAGGTTAACTCAAATTCATCTTGGGTTCTCAG
GTTCAAGATCTTACACATTTACCATTTGCGGCTAGAGAGTTAATGATCATAAAGGTCGCT
GGGAATACCTCAGCTCGAAGGGATATCCTGGATATTGCTGAGGATGTTTTCAGGGCCAAA
ACAGTTGATGTATCAGGCCACACAATAACTCTTCAGGTAATAATTACTTTACCTCTTGGG
TCCAACTACTAGATTTAGGACTTTATATTCTTTTGTTGGTAGATAAATCAGTCGGTTTTA
TTTAAGCATTTTCTTAATTCAGTTTAGAAATGTTGATTGTAGACATCAGAAATATGAATA
TTAATCAGATACAGCCTTTACTTGGAGCATTATCCGTGTAGCCGTCAACTAGCTGATAAA
ATTTCAGTATAGATCAAACTGACATGCTGCTATTTTGAAATATAAGTGATCTAAACACTC
TTATATTTCTTTACGGAGGGAGTAGTATTTATTCATGTTGATTTAAGTAGGATAATAGAG
ATATGCGACAATGTGGGAGTTTATAGATTGTTTCGGTGTCATGTATCTATGGCTATACCA
GCAAATCGTACTTACCTGATTGCTTATTATATTCTTGAGTACTTATGAAGAACTAATCTT
AGAGTATCTTTTAAAGGGAATTTGTAGGATTGTAATACTTACGGATTTTTGTATATCTGA
CATAATTGTAATCCATTTGAAGAACAAAATTTGACATAAACTGTATTTATATAAATATCT
CATAAGAATTCACTTGCTGTGTAGTATTTCATAGAAACATTTCCATTAACTCATACCTCG
TGCAATGATTTCTTTGTTTTCCCTATGGCGTAATTGAACACCCTATGGTTGGGATTCTTG
TTGTATTTAATCCTACGATTCAATAAGGCCGGACATTGCAATCCTACCCTTTCCATTTCC
TACATTTCTTGAATCTTGCAAAAGAGTCCGACAAGGACAATAAATTTAGAGGCATCAATA
ATTTCTTTTAACAAACAATAACCTTATTGGCATGCAGCTTACCGGGGATCTTGATAAAAT
GGTTGCATTACAGAGGTTGCTTGAGCCCTACGGCATCTGTGAGGTTCGTACTGAAGGTTT
TTTTTTTAAGCTCTTGAAGGTTCACTTTGCAAATGCACCATAGTATCCATAATTTGTGTT
CATCAGCGGATTAGTTATTCCTTAATTGTGGAGTGCTTAGGCCAGTGCAAATTGTAGTTT
AGCAACTGCAAATTTTTGAATGATTATTTATAATCGATCCTTTACCCTCCCTGGCCATGC
ATTTTGCAGATTGCACGAACTGGCAGGGTTGCGCTGTGCCGTGAGTCAGGAGTCGATTCC
AAGTACCTCCGTGGCTATTCCCTTCCTGGATAGCGTGTCAGTTGACGAGACATCACGCTC
CATCAGCTCATGGATTGCCATGATTCTTCTGATCTCGGATCTCCTAAACACCCTTTGTGC
AATGGTGTTTCATTCCTTTCGAAGCATACAGCAAGAAGACGCCTGTTATAGTTTACATCG
ACTAGATTTATACTTTTATCCTCTAGAGTTTTTCTTATAGATACCACAGAGAAAAGGGAT
TGGGATGTTTGAATCCCATGTGAGCTCACGGAGGCAGAAGAAACCTATTCGTAGTTTCTT
AGCTGAGGTTTTCGGCTTCGAAGAACAAAATTAAAATACTTTGTTTGTCGAAGAAGACTC
TTTTGCTTTATGAACCATACTTAAATCATGTATATACGCATTGGCACTCTAAATCATATT
CCTTTAGTGCTAAAACCATCTAGTGTTTTTTAGGCTTCCTACTTCGAAGCCTGCGATTAG
CACAAGCAAAATTTATTTTCTCTGATATCATGAATCAAACTTGAGACCATGCTGTCAAAT
TGGGAATTTACATTTATGCTTGAGCACTCTTGAGCCCCCCTACAGCTATGACATCTCTAA
CTGAAATATGGTGCCCTTGGCACCGACTTAGGCCTCCTTTGGTTCATAGGATATGATTTT
ATAGTAATAGGAAACTTGTAGGAAATGAAATGACATGTATCTCAAATCTTATGATTAGGA
ACAGAAAAAAAATGCATTTGGTTCACATCATAGAAAAAATTCCATTTGAGTCTAGTCTCA
TGTCTATTTTCCTTTGAAATGTAGAGGAAAGAAACTAATCCTATGCATGAATAGAAATTC
ATTCCTATAAACCAAAGGGCTTGGCACCCTTCATTTCATTTCATTTGTACCAAATGAAAT
GACAGCTCGTTTGGCACCAAATGAAATGAAATGAGATATTTGTTGGGATTTCATTTGGTG
GAATGGAAATTCAAGTGCAAAAAAGAATGTTTGGCTACCACAAGGATTTGTACATTGAAA
TGACTGTGAATGTCATGTTTACTGTCCATGGTGTGGAGCCGCAGCTTGACAGAGGCGGCC
TTAGGGAGAGACGAGCTGGTCAGGAGCGCGAACTCATCCTTCGGCAGTTTGATCCGTGCC
ATGGTTTGGACGGGCATGTGCACAAACCCCTCCTCGGCGACTAACTCAAGCATGCCGTAG
TGGGAGCCCAGTAGCGCGGCGGCGTTCTGGACCCGAAACTCCAGCGGGTACTCCACGTGT
TGTGCTGTGCTCTGAGCTGATTCGGTCCAACACCTGTAGTATTGCGCGAACACGCGACGC
AACCACTGCTGTCGGAGGTACACCTGCATTGCCTCCTCCTCCCTTGCATGCTCCTCCTCC
TTGATGTTCCAGTTCGATGACAAGGAGCCGCCGCCCGCGACCACCACCACAACGACTCAT
TAATTCTGATGAAAAGAGAAAGGGTGTGTCAACGAAACTAATTCAGTTGACGAGTGTCGG
GGAGGGATTTTGGTCCATGCATCGTACTGATCCGATAGGAATTGAGTGAATAGGATAAAA
CTATCACTTTTCGCGTTAGGATTTCAAAAAACTACCGAAAATTTATTTGTGACTGATACC
TACCACTTTTCATGTCGGTTGTCTTAAAAAACCTAAATTGCCCGTTGCTAGCAATTTAAT
CCGTTTTTTGACCGAAAGGGCCCGTCTATCACGCCACGTCATCACCACAAGTGACGGTGA
GGCCGTTAACAGCCGTTACCAGGCCGCTGCGGTCGGACCACACCAGCTCGCTCCCTAGCC
TCTCACTCTCTCTGTCGAAAACTCACTCTCTCCTTTCACCGTGCTCTGTCTCTCCCAACG
ATGGCGGCGGTGAAGAAGAACGATAACAATGAACCTTTGGGCCCTAGGGCGACCGCTGGC
GGTGAGGGCGGTGCTCACTCTGAGGTTGACAAGTGGCTAGGCAGTGTTGTTTCCCGACCC
AACGCTCGTCGGAGCCACCCACGCATGAGGTCCACATCTCGCCGGAGTGCCGCGCGGCCA
GGGCAGTGGTCCAGATGCATCCACGCGGATCCAGCAGGCGGGTACTAGTAAGTTACTCCT
TTTCAATTTCTTTGTTAGTGTATAACTAAGGTTAGGATTAATTTTAGATTTTTCTCTTGG
TATATTTACAAATTAGTTCCCTTTGGTAGATAATTATGTATACACTGTAAGAAAATTATG
AACTAGCGTTACGGTTGGTAAGTGAACTTTAGGATTTGTTCATTGAAACTGTTCAAATAG
GTCACGGAAATGAAACTGATTACATAGGTTGTTTACATAGGATGTTGCATATAATTGAAC
TCCATATCATCACATATCAGAAATCTGATTGTTTTTATATCTGTTTTTGCATAGTTTGGA
TGATGAAGTATGGGAATTGAGGTTGCATTTTGAGGGTAGAGGCAATATGGAAAGGAAATT
TTCCTTATTAGAAATGAAGTACCTCTTATTGTTAGCACTGATTGAACTTGAGGGCTATGG
GTTGGATGTCTATTTGTCTTATGTTAAGGATGAGGGTAAGGGGCTCGAGGGGATTGAGGT
TTTGGACAGTGATGAGAAGGTGGAAGAGATGCAGATCTCAACAAACACACCGCAAAATAG
TATTACATCGGATACATGAAGATCATGAAGAACATGGTATTGAAGATGAAAGAGAGAGAA
GTCATCTAGCTACTAGCTATGGACCCGTAGGTATGTATCGAACTACTCACACATCATCGG
AGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATTCCCTCTTCGGCAGATTACC
GGAAAAGGCTCCTAAATTGGATCTGTCGAGAACAGAGGCTCCCGGTGGCGTAGAAGTATT
TTCGTGGCTCTTTTTGGCGATATGGGAATATTTGGAAATTTATAGGCCAATAATTAGGTT
TAGGAGGCCCCTTGACCTTTGGTCTCGTCCTAGCGATCCGGACGCCCCAATGGCGGTCGA
GGTATGCGCGGGATTGAGCCGTGCCGACACAGAGTACTAAGGCGCTCCAAATCAACCCCG
TCGTCGATATGTCTCCTTCATGAGGGTTGCTCATACATCAAGGGGAACCCCTGAGAATCG
CGACAAAGGGGCCTCACTAGTCACGTAGCCCCTCGCCCCTTGGTCTCGTCCTAGCGATCC
GGATGTCCCAGTAGCGGCCGAGGTATGCACGGGATTGGGCCCTGCCAATGCAGAGCACAA
AAGCAAGCAGGAAGGAAACAAGGCACGATATAAAACCGCAAAGAGTTATTACAAGCACCG
AGTGTTTTGTGAATCCAAACAAGTCTTATGCCTCCAGGAGACATGGTAAATGTCGCATGT
CGAAATCTAGGAGGAGGAGCCGTCATCGCCATCTCTGCCGCTGCCCGTCCCAGTCGCGGC
GAGCTCATCATCAACATCGTCGTCGATGCCTTCGTCGCCACCGATCGCCGTCACCTTGGG
GGGGCCTGGCGGCGGGGATGCAAGCAAACTTATTCACCAGCGCGTCCACGGAATCCTTCA
CGGCCGCCGCCGCGGCAACGCGGGACTCAGGGGCAACCTAAGGCATCATCGCGTTGAAGT
CAAAGCCGGGCTCGCGGAGGTAAAGGTGGTTGAAGACGCGCATCGCGGACAGGGAGCAAA
GGTCGCGGGACTCATCCTCCAAGATGGCAGCCACCCTCACAACTGCACATTCGAGTGCCT
CGGTGAGCCTGGAGGAGAGCCCGGTGTAGCCGCCCTCACGAGTTGCGAGGGGCTCCTCGA
ATCCTCCCCTGCAGATGAAGCGCAGTGCCTGGCGGAGCTTGAGCTTGATGGAGGGGAAGA
CGTCGTGCTCCGCGGTCGCCTTTTCCCCAGTAGCGGCAAGGGTCTTCCCCCTGGCAGCCA
GCTGGGCCATCGTCTCGGAGGCATGCCGAGCATGGGCCGTCTGGGCCGCTCCTACCTCAT
CCTTTAGCTTGGCCAGACGCTCGCACTCCGCAACTTGGTCGACGGCCGCCTGAGATAGGA
CAAACTCGTGATCGGCGAGCTTCGCCTCATGAGCCGCAAGGTCCTCCTCTCGGTGGTGAA
GCCGCCACGCATGTGTGGTTCGCTCCTCCTGAAGGGCCTTCAGTTTGGCCTACGCCTTGC
TGCAGCATTTAGCGGCAGATGCTGCTTCGGCCAGCGCAAGCTCGCGAGCCGCTTTGGCTT
CGGCGGCCTCCTTCCTACTCTCCATAGAGGCAGCCTTGGCCCGACCCGAGGCTGCCTTGG
TGGCTGCGTCAGCCTGGAGCCACTCAGAAATAAGCCCAGGTGTTCCCTCGCGAGGGAGCG
CCCATCGGCGTCTTGGAGGTCAGCCCGGATCTAACCAAGCGCGGCGAAGGCCTCATCCAG
AGCGTCGGGCCCGACTAACAGGCCGTAGTCCGCGAGAACAAGGGTTCGACCAAGGGGCGG
CACGAGCACGTCGGCGGGTGCTGCCTCCGAAAGAACAATGACGCGGTAAACTTGGGGCAC
TGGAGGCTCCAATTTCTCCTCGGGCACGACGAGGGCGGACGAATTCACAGCGTGCTGGCC
CCGGGGGCTGGCTCCTCCTGAAGCTGCATCAATGCGCCCTCGCTAGAGGCCGACGACACC
CTCTGGACAGGGGTCATGAGTACACGCACCATCAACAATCAACCAAAGGCGAAGCAGGTT
ACTTACTCCTTGGATGCGACTGTTGGAAATATGTCTTAGAGACAATGATAAAATAGTTAT
TANNATATTTCCTGTTACAAGATAATTGTTCATTATTCATGCTATAATTGTATAGAATGA
AA