morexGenes - Barley RNA-seq Database

Contig contig_2537644

Source Contig contig_2537644

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_2537644 (277 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_2537644

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_36155	1	223 bp	MLOC_36155.1	Available	Available	LOC_Os03g58250.1, FRAME:-3, EVALUE:3e-12, 13103.m06399 protein bZIP transcription factor domain containing protein, expressed

CDS Structure of MLOC_36155

Contig Sequence (277 bp)

>contig_2537644 277 assembly3_WGSMorex_rbca.fasta
CGCGTCGCGGCGGCGGCGCCTCCCTCCCCGGCCTCCCCCCTGAGCCTGGCGTTGCCCCCC
CCCGGGCCCCCCCCCGCGCCCGTCGCCGCCCCCGCCCCCGCCACCGCGGAAGCGGCAGGC
CGCTTGACCTCCGCTCCGCTAGCACCGGACATCGGGCTAGGGTCGGCGGCGGGGCTGTCG
AGCACGGCCTCCTCGAGGAACTTCTGGAAGTACCACTCGGACGGGCACCGGTTCATGGCG
CCGGCCCCTCCGGCGGCCGGCGCCCCCCCCCCCCGCC