Contig Data
morexGenes
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Map Locations of contig_252657 (2416 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_252657

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_35934 1 1047 bp MLOC_35934.1 Available Available LOC_Os05g39670.1, FRAME:+3, EVALUE:2e-83, 13105.m04184 protein prenylated rab acceptor, putative, expressed





CDS Structure of MLOC_35934






Contig Sequence (2416 bp)

>contig_252657 2416 assembly3_WGSMorex_rbca.fasta
CTACTGTACATACCCATATAATTTATTTAGTCATCTATAACGAATACAACTGAAAAAATT
TATATACTTGCTCTTCCTTAGGAGTTGTACGTTTCTTCCTGTTGTTCGTGCCGTTCTTGG
TGCTGTTCGTGCAGGTGGTGTGCACCGAATCCATGTCGGCAGCAGCAGCAGGTGCTGAAT
GGGTACTCCCAGAAGAGACGAACGCCACACCGGCCATCCCTGCTGTCGTCGAGGATGGAT
CGGGCCGGGAGAGGCCGACCCTCATCACGGGCGCCATGGCTGTCCTCGCTGCTGCTGCTG
CTGGGGGAAGGTCCGACTGCTGGGGATGGAAGGAGGAATTGGGGGGAGGTGGAGGAGGAC
CATCAGATCGACTCATTCCGGTGGTCTCCTCGCCGCAGACGTACTCCGGTCGGCCGATCC
AGGTCGCGGCGGCGGCTGAAGCTCCTGCGTTCTGTTCTGGCGGCTGGAGGTCCTGCGTTG
TGGAGAACGAACGAGCTAGGGTGTCGCTGGGCAAAAAAAAATGAAAGGAACGAAACGATA
TATGACTTATGGGTGGCAGTGGTGGGTAATTATCTCACAACTTCACGTCTAGTTATCAAA
CTACAATTTTCGGAGTACCCCTTGAGGAGCTTCACAGAAAACACGAAGCTGGCCCTCAGA
TTCGAGTTTTTTCGTGAAGCTGGACATGGTGAAGTTGACCCGTTTGGCTAGCGATTTTGA
GAGCAGAGCTGATTTTTCTAAAGCAGAGCAGTCCCAAACAGGCCCTAAGGGGCTAAAATT
ATAAGGAAAAGGCCTCTAACCACGACACGTAGAAACCGCCAATGACTCGTGGGCCCCGAG
TTAGCCCAGCACCCACTGTGCGTGAGGTGGAGACGGCGCCGAACCACTAATCCTCGGAAT
CATAAAAGTGCTGGCCCAGCGTGCCAATCAATCCAGAATCTATTCCCCCCGCAGCAAACA
CCATGGCCGCCGCACCGACGCCGCAGCCCTTGCTCCCGGTGACCAACCCCTCCTCCGGCG
GCGGCTCGGCGCCGTCCTCCGGTAGCGGCCTCTCCGACTCCGCGCTAGCCACGCCGGCCT
TCCGGCTCTTCCTCAGCAGGGTCTCCGACACGGCGCGGCGCTCGCTCGCGGATCGCCGCC
CCTGGACGGAGCTCATCGACCGCTCGGCCATCTCGCGGCCGGACTCCCTCTCCGAGGCCA
CCTCGCGGCTGCGCCGCAACCTCGGCTACTTCCGCGTCAACTACGCCGCCGTGGTGGCCT
TCTCCCTCGCGGCCTCCCTCCTGGCGCACCCCTTCTCGCTCCTCGTCCTCCTCAGCATCC
TCGGCGCCTGGTGCTTCCTCTACGTGTTCCGCGCGCCCGACCAGCCCGTCGTGCTCTTCG
GCCGCACCTTCACCGACCGGGAGACACTGCTAGGCCTCGTCGTCTCGTCGCTGCTCGCCT
TCTTCCTCACGTCCGTCGCCTCGCTCATCATCTCCGGCCTGCTCGTCGGCGGCGCGCTGG
TGGCGGTGCACGGCGCGTTCCGCATGCCAGAGGACCTCTTCCTCGACGACTCGACCGCTG
TTTCAAGCGGCAACGCTTCCCACAGGCTGCTCTCCTTCCTCGCGTCGCCCGGATCTGGTG
TTTGAAGCCTGCGCGAGATCTGGTAGCCTTCTTGGATCAACGAGTTCATTTCAAGCCTGA
ACCTAATTTAGCGAGATCTGATTTTGGTTTTTAATATGCATCTCCAGTTATGCAAACATC
CGCGAGAGCTGTATGCTCTCGTATTTGACTGTTAAGCATTAGCAAATTGATCACTGTGCA
CTTTGAAACGATTGAACATCATGACATGCTTGATAGCTTCCACTGTGTTGTTTTTTATCT
ACTTGTTCAAACTGGTACCTGAAAAATTTTGGGGGCTGTGGTGAGATATTTGGGAGGGTC
TACATTTCGCCACTTCTTAGTAAAAAGGGACGTGGATAAAAGCATCCCCCAACACGCGCT
TCGTCCCGCGCTTAAAAAACTGATTTACAGCACGTCCATAGTCAGGTTTGGCGCGGCACG
CAGCGCTGGCTCCAGCAGCCGCGCTAAAATGCAGCGCGGGCGCGCAGCTCCAGGAGCGCA
CACAGCCGACGCCTCATATTTCTTTATTTTGGACACAATTTCACACATTTCATTCAACAC
AAAACACATGGCATATAATTTAAATCACAAACATCGTTCAACCAAGTTTGTGCCTAAAAA
TTCATGCCCACAAGTTCAAATACGCAGTAGAAAACCATGAGGACCCAGTCTGAAGTACTA
CACGTCCGACTGCGAAGCGCTTGACACACATGATGGTTGGCTCTCACCCATGGCCAAGTG
ATCATCAACTAGATCAGCTGGAATATCGTATGCCGTCTTCTGCTTGCAAATAAAAAAACA
CAAGCACCCCTCCACA