Contig Data
morexGenes
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Map Locations of contig_252454 (884 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_252454

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_35867 2 522 bp MLOC_35867.1 Available Available LOC_Os12g32210.1, FRAME:+1, EVALUE:1e-26, 13112.m03284 protein autophagy-related protein 10, putative, expressed





CDS Structure of MLOC_35867






Contig Sequence (884 bp)

>contig_252454 884 assembly3_WGSMorex_rbca.fasta
CCAGGGCCACCATGGCGTGCGCACCGACCGAGACTCACGGATCGTGGACATGGGATGGCA
CGTCGGAATCGGTCGTGGGAGATCGCATGATCAGCGTTTGCTTTCGCATGAAATAAAACG
GCAAGAAGGCCGGAGAGAAAAGCTGCAAGTTCACGCAGCACAAAACCTCGCTCTCTCTCG
CTCGCGTTCGATCTCAACAATAAATATCTTGGAGCAACCGATAGTGATGCGCGACGCTGA
GTTCCAAATTTGGTTCTTTGTGCCTCTGATTTTGGGGTGGTAAAGCATGGAATAGAAAGG
ATCACCTTGGCCTCACATCATACACTGGCTACCAGTACTAGTTCTGAGTACTAGTTCTCA
GTTTTTTCAATAAGGACTGCGATAACTGCGATCCTTCTTTTGTGATTGACTTTTAAGCCA
TAGAACTAAGATTCTTCAGCTCCTAATTTAAATATTCGCCAGCCATGATTTCTATCTCTT
TGCAGGTTCAGAGCTCCAGGGATAATGTTCACCTTTATGATTTCCATATTGTCTACAGCT
TTTCTTACAAGGTTCCGGTGCTATACTTTCAAGGTCTTCAGTCTGGTATGCACATCCTGT
AACATTGCTGTAGATTTACTTCTTCTGCTCTCCTTTTTGATAGCCAACATCTGCAACTTG
TCCTTAGGTGGGCAGCTGCTAACTTTAGATGAGATAAAAAAGGATCTTCCTTCTCATTCA
CTTCAGTTGTTAAACGAATCAAAGTGGACATTTATTACTCGAGAGGTATGGACGGTTTGT
AATTGAATTTTTGATAATGATATGTAAAACACATACATGCTTTCTTGTTCACTTATTTGT
TGAAACCTTAGACTCACCAAAAATGGTTGAGCGTCTCTTGCCCT