Contig Data
morexGenes
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Map Locations of contig_249817 (779 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_249817

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_35542 1 682 bp MLOC_35542.1 Available Available LOC_Os08g08050.1, FRAME:+3, EVALUE:3e-21, 13108.m00829 protein retrotransposon protein, putative, unclassified





CDS Structure of MLOC_35542






Contig Sequence (779 bp)

>contig_249817 779 assembly3_WGSMorex_rbca.fasta
GTGGCGCACAGATTGGGTGGCGATCAGATAGAATGATGGAGCAACAGCGGCCTGGGGCTC
TCCTTCTCCGGTGCGGTGGCACTCAGAACAGGGGCGGGAGCAGTGGCGGACCGGCGGCAG
CCAGCCTTCCTCGCATGTGTGCTGTATAGCGGCGGTGCGGAGCTCAGGTCGGATGGGGGC
AGAATTAGGCAAGAAAAAGGGAGGGGGTTGTTGTGGGTATAGATGGTTGGGTTAGGATTT
TCCTGTGTCCAACTGGTATCAGGGGGTATCCCACTGGTATCCGAATTTGTTTAATTTTTT
GGACAACAGGAAATACAGGATAAGTATCAGCTGGTATCCAGATGTACCTAACTCCCAATA
TGTCGTTCTCCTGCCATATCCGTGCAATTTAGGTTCTAGCTACTAACAATCCCTCTTTCT
CTGTTTTATTTTGTCATTATGATTTTGATATTAATATGCATATTTGCAACTTATCTTCAC
ATTAGGAAATGTTGACTTACTCTCATCATTGAACCTCGTCTTTACAGCTATCCTGCATTC
TTGAATTTGATGGTGCTTGCAAAGGAAATCCCGGGAAATCAGGGGCTGGTGTAGTAGTAA
GGCGGTCAGATGGAGCTATGGTATGTAAACCAACTGTTACTGTGCTGGTTTGTTTTCTTA
GTGTTTATTTACCACGAGTAGCTGATGAGGACCATGTTCTTCTACTTTTAACTTAAGATT
GCCCAACTACGCGAGGGTTTGGGTATTGCAACAAATAACGCTGCTGAATATCGTGCATT