Contig Data
morexGenes
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Map Locations of contig_249691 (1493 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_249691

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_35529 1 844 bp MLOC_35529.1 Available Available LOC_Os05g51220.1, FRAME:+1, EVALUE:5e-15, 13105.m05517 protein aspartic proteinase, putative, expressed





CDS Structure of MLOC_35529






Contig Sequence (1493 bp)

>contig_249691 1493 assembly3_WGSMorex_rbca.fasta
GCTTGAGCAGGCACCCGACGTCGTTCCTGAGCCAGCTCACCGCACGCGGGCTGGCCGACT
CGCGGTTCTCATACTGCCTCTTCCCCGGGCAGAGCCACCCCAATGCCAGGCACGGGTTCC
TCCGCTTCGGCCGCGACATCCCGAGGCACGACCACGCGCAGAGCACGCCGCTGCTCTTCA
CGGGACCGACCTCCCGCGGCATGTACTACATCCGCGTCTTCGACATCAGCTTGAACGGGA
AAAGAATCATGGGGTTACAGCCGACGATGTTCAGGCGGAACCCACGAACCCGACGAGGGG
GGTCCGTCGTCGATCCGGGGACTCCGCTGACAAGGCTGGTTCGCCAGGCATACGACATCG
TCGAGGCCGAGGTCGTGGCGAACATGCAGAAGCAGGGGGCGCGTCGTGCGCCGGCGCCGG
TGCAGGGGCACCGCCTCTGCTTTCTCTCGTGGGGCCACGCGCACATCCCGAGCTTGACGA
TCGACATGTACGAACACACAGCCAAGCTTTTCATCAAGCCGGAACTGCTGTTCCTGAAGG
TGACCCACGAGCACCTGTGCTTCGCCGTCGTGCCGGACGAGGAGATGACGGTGCTCGGTG
CGGCGCAGCAGGTGGACACGCGGTTCACGTTTGACCTCCATGCCAATCGTCTCTACTTTG
CCCAGGAGCATTGTAATGCTGACACTCGCGCAACTGTCTAGATCCTAGAGCATTGTAATT
TTTTTTCTTAGGTGCTCATTTTGTCTGGTTCTTCAATTTAATTATTTTATCCATCGTTTA
AATTCACAAGGTTAATGAAATAACTTCGTTACCTAGTTATCACCTAAATAAGAATATTTA
TTTGTAATTATAGAATTCCTCCTTTCAGAAAAAATACATCATGCATGAAGTTCTTTCTGT
CAGTTCTTCGTGGACAATTGGGCATGCAGCTAGTCCACAGTTATGATTATGAATTGCATT
CCATCTAGTGGAAAAGATCGTGCACCTTCCACTCTTGCAGTAGTTTTGAAAATTATATGT
CGCATCATATCAGTGGGAAAGAAGTAGCACAATAATCTTTCATCAGAAGCAACCTAACTG
TAGTCTTATACAATTCAGTGATTCAATCATAGGTGTTCTAGATGAGATCTTTAGAGCTTA
TATAAAATTTAGAATTTTGTATATGAAATGTCAGCAACAAGCAAGCTAGCAGCTGTTGCG
CACATTCTGTTGAAATTTCCCTTGGCATCGGATGCGTGCACATCCATGCATATATGCCTG
TAGCCCGCGCGCCAAACTTGGTCTGCTTATTCACGATGCCACCAGCATACTTGGTCTGCT
TAAGCACGATCATATCTTAGAATGCACCACCTCAATTTCAAGAAAATTGCGGAGATCTCC
AACCTCCTTGACCGCAAAATCTCCATTAAATTGTGATCCAAATTCTATCGTATTGGACTA
GACGTAGTACAAACGGTGTGGGCCTTTGCGTTGGTACCGACGCGTACGAGTAC