Contig Data
morexGenes
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Map Locations of contig_248500 (1880 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_248500

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_35437 1 411 bp AK372981 Not available Available None
MLOC_35438 1 253 bp MLOC_35438.1 Available Available None





CDS Structure of MLOC_35437






CDS Structure of MLOC_35438






Contig Sequence (1880 bp)

>contig_248500 1880 assembly3_WGSMorex_rbca.fasta
AAGAAATTTTGTTTAACTGTAAAGCACGAATCTGCTTAACTACACAATTTAGGTGGGCCA
ATGCGTGTGGGAGGACTAATTGCTATTTTCGATGGTGGATTTACATTTAAAGCTCATTGG
AACTTATGGGGATGTTTGTTTTTTAGGTGTGTCCCATGGACAGCTAGCAAGTAAATGTTA
GCATTGTAGATGTGCAATTAAATTTTACCCCCATATTTCAAGACAAATATGCATTTTTCT
TCCGTTGGTTAAGTAAAATGGAAATAAATAGCAAAATTGAAAAACTCATCACATCACTGA
AGATCACCCCCCACTCCACTCGCATGAGATCGCTTTGAAAAAATGAAAATTATCACTTCA
CATCGTGGAAGATCCACACCCTTAAAATATTCAAAGTGATAATTTTCCAAGATGTCAAGT
GAATCATAAAAGGTGCATATATATATAACAATGTAAAAAATCTTCTATGACTGTACAAGT
GTAAAGCATTAACATGAGTGTGTAAAAAGCCAACAACCAACAACGCTCCTGGGTCATTGC
CAGATTATAGTTCTGTTCGAGAGGTATTTTCCAAATTTGTCGGTGTGGCCTTGGGCCATT
ATAGCTACTCTGTATACTCTTGCTTTGTTCAATGCCTAACACTTAGGTGATGGTCTGAAA
TCTGTCCCTAGAAACAAGGCAAGATTAGTTTAGATTATGATCCGTTCTGACCAAGTTTTG
GATAATACTACCTCTGAACATGTAAGGATCTATATAGGGCTATCATATGTCCAGAGTCCA
GCAAATCTGCAAGTTTCTCTGTAGTTTGAAACAGCAAAAACAACCAAAACACCCCTATAC
CATAGAAACCGAGACTCTAGACCAAGAAAGCCATAGAGCATCCAGAAGAAAGAACCATTT
GAGTTGTCAATTCGGATTTTTGGAAAGGGAAATATATAGGTTTAATTACAATATACAAAT
AGATAAAAGGGGCAATATAGGAAAATGAGTTCCTTTTAAACTAGATATGCGTTACTTTTT
TATGTGCTATTGTATTAAACTGATATTTCTATTTATGTGACCTAGAACTGCGCCGCGCCC
GCGCTCTGTCCCTAACGCGCCTCGTCGCCGGTGCGCTCCCTGTCCCGTGGCGTCCTCGCT
CTCTCCTCCCCACCCGCAATCTTGGACTTGGTTTTGAGGTATGAACTTGACGCATCTAGT
GATTACTTCAATCCCGAGCTAATCTCCAGAAATTTTTGGTGTCTAGATCTGCCCGTGCTA
TCGATTGCAGGTTTGCAGAGGGCTCGCTGACATGTCTTGGGCGCCAACCGAGAATGACCC
TGGTAAAATTTACTTTTGTAACTGAATGAATGGATTATCTGGTACTAGTTGAAGTAGGTA
TGCTCTATGCATTCCGTCTTGCGGTGTACTGGTAAGTCTCCTCGATGGTCATTAGTCCTC
ACTGGTGCTACTTGTTCCTGACTTTAATGTGATGGATATGCCAGAAACTATCATGTGTGG
TGGCATCTTGGACCTTCGTGTTGTGAGCTATTACTTAATACAGTATAACCGTTTAATTTT
GTGTTTAATAGTCATAGAAGATTGATACATGTGCAGTGTCGCCTATTTCACCTCAGGAGT
GTGCCCAGCTATTTGCTCAGGTTGTTTGTAGTCCTACAGAGGCTTGTCAAGTAGGTTGTT
GTTTAAAGTTTACTATGGATACGGCTGATAAAATGGTTGTTTGCGATTCAAAATTCACAG
TACTAATGTGTCTCAGTTGTGAGTCAAGAGGAGATTCATCTCCTACTAAGTGTCTAAGTT
ACTCAAGTCTGTATTCATTCCCCCCTCTCTTAACAAGTACCATTGGAATGGTGGAAAAAA
ACTGGACTTATCTTCCCAAG