morexGenes - Barley RNA-seq Database

Contig contig_247172

Source Contig contig_247172

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_247172 (1820 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_247172

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_35294	1	521 bp	MLOC_35294.1	Available	Available	None

CDS Structure of MLOC_35294

Contig Sequence (1820 bp)

>contig_247172 1820 assembly3_WGSMorex_rbca.fasta
GAGGCACGCCGCCGCCGCCGCCGCCACCAGCGCGAGCAGCAGCGCCGACCTCGCGGCCAT
CTCGCCGCCGACCGACCGACCAACCTAGCCCCGCTCGCGCGCTCTTGTCCGCTGCTCACG
CCCACCCACCCCGCTGGCCTGCGACTGGTACTAGTGGCGGCTCGCTCGCTACTCGCTGGC
TAGTGCCGGTGCCAGTGCCAGAGCAGCGGCGCGCTCTTCAAGAAGTAGTGGCAGCGGTCG
TGGGCGCGGCCTAATAATTGCGGCGTCCGAGAAATAATTGCCGGCGCGGTGGGGCGGGGG
CGGAGGGCATCTTTTGTGGCACGCCGGTGATAACGCCGCGTGGGCCACGGTGTCCGTTGA
CGGGGAAGGAAGGGAGGAGGAGGTGACGAGGCGTGGCCGGCGGGAATGAATGAATGATTG
ATGGTGGCCAGTTCACGGCTGTCGGGGACGGGAATCAGCCCAGCCATGTGACGCGGCATG
TGGGAGTGTGGAGGGAAGATGGTTCTGGCGCGGGTAGCGGAGGTGCGAGCCGCCTCGAAC
ATGTCGCGGTCCTTGCGGGGCTGCGCTCTGCGTCCACCGCCATGTGCGCGCGGGAAACGA
CGGGCGTCGGGGTTTTACCTCGGAGGTGTGGCCTGGGCTGAGCTGCACAGGCTGCGTGCG
CTAGGCACGTTGGTACACAATCGAAGACGCGCCGCCGTTGATTGGTAGTTGAGGCCTAGG
CGCCTAGCACATGATCGGGTCGGTGGCAGTAGTCACAGATGGCTCGCTTGATTGAACATC
AGTGGTTCCACCCGGTCATGCACGGGCACTTTAGAGCAACTTCAACGGCCGATCCAAACG
AACGATGAATTTGTTTATTTTTTTATTCGTTTGAATCGATCGTCCGGCCGGCGTCCGCTC
TGTTTTAGATTTAAATCGATATTGCATCCAACACGTCGGTTCATTTCATGCCTGCGATCA
ACATTTTCTTTTAAAAAGGCCCGCGGCTGATCATGCCAGCGACCATGTCTCATGCCGGCA
TCATGTCAAAACATGACGCTCGCCAGCCGACCGGCACACAAAAAGGGTGGGGCTTGAGTT
CGACCACGTCATCGCAGCATCCGTAGTCATGCCAGCACACCTGCCGGCATCCAAAAAAGA
TGACGCTCGTCGCCATAGATCACTCCTCGTTGAACTTGAGCATGTCGGCCTGCATCTTCT
CGAACCACGACCTCTTCCTTGGCGACACGATGTTCAGATCTGCCTTCATGATCTCCACAC
CGATCATCATGATCGCGAGATCCACTTCTTTGGCCTTGGCCTTGATGTTAGCGGCCTCGA
TCTCTAGCATCTTGGNNNNNTTCTCCGCCTCCATCTCAAGCCTCCTTCTTCGGATCTCCA
AAAAGGCGTTCATTTGCTCTTCTATTTCTTGCCGGCACTTCTCCTCCCTTGAGTCCTTCT
TGGTGATCATGCCCTCCACGGTTGCGATTAAGGTGATCGATGTCGCATCCCGCTTGTCCT
CCTTCTTGAAGTTGGTCTTTCCCCGCGGCCGGGCCTTCTCGTCGTCCCCAACCTCCTTCA
GGGCTTGCTTCCCACCACGCGACTTGAGGGCGGCATATTGCGCCTTGAACTTCTCCTCGT
CTTTGATCACCCTAAAGCAATGGAATTGAAGCACTTGCCATTGTGTTGGACCTTGAATGC
CTCCAAAGCTTGAAATGCCTACAAATGTATTTCATGCAAGCATATTGGCAAAATGATATG
CAAACGCCCAAAAGCATAAACTTGATGCCACAAAAAAAGGGCGGCTTGCTAGCTTACCAT
GTCTTGCACGCCGATGCCGC