Contig Data
morexGenes
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Map Locations of contig_245327 (3413 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_245327

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_35029 1 630 bp MLOC_35029.1 Available Available LOC_Os02g08180.1, FRAME:-1, EVALUE:2e-29, 13102.m00943 protein protein transport protein SEC61 subunit gamma, putative, expressed





CDS Structure of MLOC_35029






Contig Sequence (3413 bp)

>contig_245327 3413 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGTGCAGGTTGTGTTGGACAAAACTGAAAGTTTTTTTCGTAAAGA
ACCAAAACTGGAGGGGGCTTTCGTAAAGAACACCATGTTGACAAGTTTTATAGGACGGAG
GGAGTAGTATCTAAGCATGCCATTATGAACACATCGTATTTGTTCTTCAATATTGGTGTT
GACAAGTTTTATAGGACGGAGGGAGTAGTATCTAAGCATGCCATTATGAACACATCCTAT
TTGTTCTTCAATATTCAAACAAATCGATCTAATATGGCTGGTGGTGATCCATTTATCAGC
GGCCCTCTACTCAATTTAAAATGTTTCCAAATATCTTGGGCACCTTGCTAGTGCATGCCA
TGACACACATAATAATTTCCTTTTGGACAATTACACATAAAGCTTGATGAAAGTAAAGGC
ATCATAGGAAAATGCACCTGAGAGGAAACGATAGGGTTTCATTCTTGTCATTTGACACGG
TACTTGATATTACGGTCTAGTCGGTATCAGGTTCAAAACTGCTCCAGGTCTACCAATACA
ACTGTTTCGAATGAAAACACAAGGGACAAGAAAGATTCCTCTACAATGAAGTCCTAAATG
AATTGCTTTAAGGTACGAGGACAAGAAAGCCAGCGCCGCCTCCATGAATGAACACCATCC
TCTCGTCCTGCGGCCCCTCACCTGTGGAAAGAGTGACGGGAAAACCTTAGAACCGATCAC
AACATCGCTATAACAAAAGTCATTCACCAGGGGCAGAAGAAAGAAAAAACATGTGCTAGC
AGGTGTCACTAGCTCTTGCAGCAGACACACCAGGTCAATGATGTACCTTACCTTGTGTGA
TGCACAACAATGATGCCAGATGGATCGCCATTTCATTAAGCAAATATTGCATACAGATGT
GAACTCCACATGACATTAGATTAAAGCACACCATACCAATTGATCAAATACAAAATCTGG
GCAACATGTTTTATATTTTGAGGACAAGAGTCGTTACAATTTCATAATTGATGAAAGCAG
CCCTCTTAGAATAGCAAGCAAAATGCAATGAAGCCTATCATGAAAATTTTGGGCTCGTGA
CTAACTTGTCGCGGTGCTGGTTAAAGGTTCTAATCCAGGATTCAAGGTTTAGAATATAAT
TGGTACAGATTCGGCTACAATAATTTGCAGGCTATCAAAACAAAAACACCTGGCATATTT
CAGCCTTATACCATCAGAAGTTGCAAAGTTTAGTTTGTTCGGAAATATGTAGTTCAACAA
TCTGTGATCACATGTTATCTGAATCCAGAATCGGACAAAATCATAAATTTAAATATAAAT
GTAAGGACTCAAGACATTTTTCTGATATATCAGATGGATTTCGTCTGACTGATCACATGA
ATTCTTATAAACTAGCATATGGTTATTTAAAAGGAACTAGTGCATAAAAGTATGTCTCCA
CATGCTGGGCACATAAGCCTAACTTATCATCATGATGGGCCTAGGTTGAAATTTTATACA
GGGTAGAATAGGTCACTGAATGAAGGCCACTCAAAAAAAAGGGCCACCGAATGAAGCATA
GTCAAGATAATTAAAACAGCGTAAACAATGAAAACCACAATAAACATCTAAACCAGATTA
AACCAACTGTTGAAGGATATCAGCTTGGAAGTATGTGCACTGAGTATGTAGGATAAAGAA
CAAAATAAGGCCCAAATCGAGGCATTTTATTTCATCAAGAACTGAGTATGTAGGATAAAG
AAAATCACTACTACTCCCACTGTAAGGTAATATAAGACCTTAAACAGAGGGAGTACTTGT
TATAGTAGTTAAATACAGGTACATATTGTTCAAGTTTATATTGGCCACAAAAGGAGCCGA
TGCATATTCTACTTATAGTAGTGGTTCCCTTACTACAATTCACAAGAACTCACGCCTCAG
GCTTCAATGCTGGATAAGGTAAACTACTAAGAGGCTACGAGCATGAGAATACCCAGTCAG
AGCCAAAAATTCGGCTCCAAACCAAGTATCATCTCAAAAATGGATTCACACGGACGTGCA
CTGGACACAATTCAGCACAATTCAGTGCTGAAAGCACCCATGTATCAATCACACTACCAT
AACAAACATAACTCATTCTAACAAACATATTCTTGCTAGTTCTAACAAACATAACTGGAG
TCAGTTCTAACGAGTAACTCATTCGATCGTACAGATCTACGATGCTATACCTCAGGGGAG
AGTTCTACGACGGTGAATTGTTTGCACTACTTCCACAAACACACGCATCAGAACAACGGC
CGCGCAGAATTTCCAACGAAGAAGCCAGATCCCAGATCGGAGGGATGTGCGGGGAGCGAG
GAAGTACCTGCGGAGGACCAAATCAGCCCGACCCGACGATGATGTTGTTGATGGGGATGA
AGATGAGCTTGACGAAGAAGCCGACGAAGCCCATGACGACGAACCCGATGGCCGTCCGAA
TGGCCACCTTGGTGAACTCTGCACACGCCAGCCAACCATACGGCGTCAGATCCGGGCCAG
AGCTAAGACCGCCGCGGCGGCGGCGGATCCGATGCGCGGCAGGAGGAGATCGCCTGGGTC
CTTACCCTTTCGATCGGGCTTGTGGCAGCGCTTGACAAGGCGGACGCTGTCCTTGGCGAA
CTCCCGGAGCGGGTCGACCACGGAGTCCACGGCGTCCATGGCTGGCTGCGGCGCGGCGCG
GGGCGGAGAGAGATCTCGCCGGAGAGGTGGGATGCAGAAGGTGGAGGTGGGTTTGCTCGT
GTCTGACGATGCGGATGGACGATGCGTGTTTAATGAGAATATGAGAAGTCTGCTGCTTTC
CTGTATGGGCCTCCTGGGCTCTACTGTTTGGGCTTCAGTGAGCCGAATTTTATTGTGCAT
ATATATCTGGGTTCCCCAAGATATTTCGTGGAATCCAAGCCCTAAAAAAATACTCCCTCC
GTTCCTAANNNNNNNNNTTTTAAGATATTTCACTAGATGACTACATACAAAACAAAATGA
GTGAATATACACTCTAAAGTATGTCTACATACATTCATACGTAGTCCTTTAGTAGAATCT
CTAGAAAGACTTNNNNNTAGGAACGGAGGGAGTACTTATCATGTACTCGCGCGTTAACGA
ACATAGCAATCGAAAGCCGTACTACAAAAAAGAGGCGGGGACGACTAGGGTTTTGACCAA
TGGTCGCGTTCTCACTCATACCCATACCCTGGTCTTTGACCACGACGAGGGGGCGGGGGA
TTTTGGGAAACGTTGCATCAGAAACAAAAAAAAATCCTGCGCACATGTAATGCCTATCCA
TGGTGATGATCATCTACGATAGAAAGATTGAATCTACATACCCTTGTNNNNNNNNNNNNN
NNNGCGTATATAACGCGGTTGATGTACTGCAACATCTTCGCGATTCAAATCGC