morexGenes - Barley RNA-seq Database

Contig contig_245303

Source Contig contig_245303

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_245303 (2031 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_245303

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_35019	1	188 bp	AK370604	Available	Available	None
MLOC_35020	1	343 bp	None	Available	Available	None

CDS Structure of MLOC_35019

CDS Structure of MLOC_35020

Contig Sequence (2031 bp)

>contig_245303 2031 assembly3_WGSMorex_rbca.fasta
CCCGCCGCATCCGTGGCGAGAGGGCCTAAGCTCCGTTCGCCGTCGTCGTCGTCGTGTGTT
AGTTAGATCCTTGTTAGGCTGTGTTCGTTGGTGGAAATGTGCGTGCTGGTAGTGTTTCAG
AACTGAACCTTAGTTGTTCTTCTCATGGTGGATGTGCTCTATCTAATCTGATGGTACCAT
CTTGTTGTCATCAGCAATAGAAATGAAAATGTCGGCTTTCTGTTCTCAACCATCTGTGTC
TGAATGCCTGCTTCAGCCTGCATGTGAGCCGTTCTTCTTGAATGTAATTTCACCAAATTG
TCGAATTCCTTGCCTGTTTTAGATAGCATGTTCTACATATTTCTTATTTGGTCCTGAATT
AACATTCGACTGTCAAATTTTGTAATGAGTAATCTGGTTAGCTGCCTCTGAACTCGAACG
AACGAACAGTTGAGATGGTACCTGAAAACTGCTTGTCCCCTAGTGTGGTCGTCTTCAGTG
CGTCTATCGACCAGTTGCATGACAGTGCCGGTATGTTTGATGTTCAGTGCACATATTCTC
TTGGAAGCATCTCTACTTTGCCTAATTATGCTGCTACCCCGCAAGTCTGAACCATGCTCT
GAACTAGGAGTACAAGTTACTTGGTGTCTTGTCTTCAGATCTTACAGGTTCGGGAAAGGC
TTCAGGCTTCCACACCGTGACTGCAATATTTGTTGCATCACCCACAATTCCTAAATAACG
CACCAGAACATCCAGGAGGCGCTGTCCACAATTGATAAAAATCTCATGGTCGAAACAACA
GTTGTTTGCCTGATGTTCTGCTCTCAATGGATCGGCCATTGCTTTGTTTGGATAGACTAT
AGAGTATCCTCAACACTGGTTACAGTCAGGGGTATAAAGAGAACATGTCCTATCCCAAAC
ATGTGAAATGTCCTTTCGGTTTTAGCTACTACTGTGTTCTTAATTGCTTCGATTTTGCAG
CTTAAACGGTTGCCTCAGAACCTGAATGAACATCTGTAATGAGCTCGTTCAGTTCAGTTT
TGCGTACCTTACATAAACAGTGCTTTTCTGATAATCACATCGGTGCTGAAAGTGTCTCAA
CCCTGCTTCTGTGCTGTATAATCTCACAATTACAAACACAGTTGTAATACTCCACAAGTT
ACAAGGATGTCTCCAACCAGTACAGTTTTCCTTGATTAAGTGTTTATCACAAGGCAAAGT
GCTATGATTATAAACACAGTTGTTTACTGATGCCCAATATAAGTTCTATGATTGGAGAAA
ATTTCTAATGGTGATATATAGTCCATGGCTGAAGATACATAGCCGCTGCTACACTTTTGC
TCAATGGCCATTAAGCTTCTAATGTATAACTGGGGATGGATTTATTAACCGTCTCTAATA
TGAATATATGACAACGCACGCTTGTGCATATTCTAGAAAAAAAAGTGAATAAGAGTGATC
CATTTCATTTGAGCAAGTTTCTTGTGGATTATATTCAGATCTCCAAAACAGTCCGGATGA
AGAAATAAGAATCTGTTACTGGAGGACATGCTACAGCATTGCAGAAAGTATAGCAAGTTG
AATTGATCAAGTGTCTTATATTTTTTTCTGGGTTTGAAATACACCCACAGGATATCTGAA
GAGTGAAGACAAACAATCTACTGGTCCAAGCTTCAGATCCCCGTAGCCCAAATTTGGAGC
TGCCGCCACAACCTATCCCGCCAATCCACCGGCCACGTCACCGATCCGCGGCGTCCCTCC
CCCGGATCGCGGTCTCGACCGTCCACTCCGTCCGCATCCAACGGCCGTCAGGTGCCTCGT
CCAACCTGTCGTCCCCTTTAAAGCGCCCTGCGCCGCTCCCCCCCAATCACAGCACCAGTC
TCCACCACCGTTCCTCAGAATCCACATCCGCTCGTAGCTCGAAGAGCATCAATCGTCAGC
CATGTCCGGCCGCGGCAAGGGAGGCAAGGGGCTCGGCAAGGGCGGCGCCAAGCGCCACAG
GAAGGTGCTCCGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGGCG