Contig Data
morexGenes
Links



Map Locations of contig_245286 (3835 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_245286

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_35013 3 2099 bp MLOC_35013.1 Available Available LOC_Os03g63900.1, FRAME:+2, EVALUE:6e-153, 13103.m07093 protein 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed





CDS Structure of MLOC_35013






Contig Sequence (3835 bp)

>contig_245286 3835 assembly3_WGSMorex_rbca.fasta
TCGCCCCTCCCCCTCGTCTGATCACGGAGCAAGACCGTCAGGAGCACCGTCGGCAGCAGC
GCCGGCTCTTCGTCGTCGAGGAGGACGAGTGAGCCATGACGGAATGGCGCTGGCGCCACC
CGAAGGACGTCGCCAACGAGAATGCCTGGGCGGAGAGGACGGAAAGGCGTCTCGCGGAGC
GGCAGGACAGGCGTCGGCACAAATTACTCGCCATATCGCAGTGCGGGGCCGTCCAAAGCG
GTTTGCCGCCCATCTTCACCTCCGACGATGAACATTGGGAGGACGCGTTTCTATCTACCT
TCGACAACACCTACAGTGACGACTCGAATTAGTTTTATATCTATATATACTAGTTTTAAT
ATCTATGTGTTGAAATAGTTTTATCTATATGTACTATATTATCTATATGTTTTTATCTAT
ACGACAACCATGAACTATATGCATGTTGGACAAGTTTTGGGTGTTAGAGCACCGCACACG
CGCTAAATTTGCAGCGGTTGTTGAAGCACCGCACGCGCGCTAAATATGTTGCGAGCGCTG
TAGCCGCGTTGGTCGGCGTCATAAAAAAAGTTAACCGGACGCTGTATATAAGTTTTTTGG
ACGCCGGTCAAAGCGCGCATGCTGAAGATGCTTTTAGTATTGTGTTCGAATAAGTAAATA
AAAAATAATGTTCATTATGAAAAGATCAGTTTTCTCTCTCTTTTCTTACATTTAGTTGTT
GTTACTAGGTCATTCCGCCGTCCGAAGAAGGAATGAATACATCTAAATATATGTATTTTA
TTCTTAAATATATTTATAAATTTTTTTGATAAGTATTTTTGGATGAAGGGAGCATTGAGC
AGCATACGATAGGAGCTGGCACGAGGAATATGACGGCCGAGAGCGGCACTGCACCAGTTC
CTTCTAGACGGCGCAAAGCTTGTAGCACGCGGGCGGCCGTGGTGTGATTTCCTTCTCCTC
TTTACAAGCAAACAAAGCGGCAGTAGCTGCCGCGTCGGTATCTCAGACTTTTGTGTTGGC
ATGCATTTGCACAACAGCTCAATTAAACTACGGCAATCTACGTAGGTAGCAGTTTTGTTG
GTGGATCTCGTCTCCTTCTTCAACGTGGCGAGCGCCACGAGCACAGTACTCCGGACAAGA
CCAAACTTGCCGGCCGGCCGGCCGCCTTAATTTCACCTGCAACTGCAAGATAAATCAGTG
ACGAGGTGAGCAGCGAGCAAGCACAAGAATCTATCCACCTGAAGATGATGGACGACCCCA
AGCCACGGAACCTCGGCGGCTCGCTGCCCGTGCCCAACGTGCAGGACCTCGCCGGCCGCC
CCGATGAGCTCGCGGTCACGCCGACTCTACTCCGCCGCTACGTGCGGGCTCAGCCCAACA
CGGTCGACCTGCGCCCCGACGCCCCTGCCGGCGAAGAACAGGAGCACGTCCCCGTCGTCG
ACCTTCGCCGGCTCCTCGGTCCGGACGAGGACGGCCTCGCCGGCGGGCGGGACGAGGAGG
CCGCCAGGCTGCGGTCGGCCTGCGAGGACTGGGGGTTCTTCCAGGTGGTGAACCACGGGA
TACCCGAGGAGACCCTGGAGGAGATGAAGAGGAGCGTCATGGGCTTCTTCGCGCTCCCGC
TGGCGGAGAAGGCGGCCCTCGCGCAGGAGCCCGGCGAGATCGAGGGGTACGGCCAGGCGT
TCGTCGTCTCGGAGGAGCAGACGCTCGACTGGGCGGACATGTTCTTCCTCCTCACGCAGC
CGCCCAGCTACCGCGACCTCCGCCTCTGGCCGTCCAAACCTTCCACGTTCAAGTAAGCCA
GTATCATGTCATCGTCAAGCTTCCGCACGTAGCCATGAAAGGTAGCCACCGTCTCGTGAT
TAGCACGAGCTCCCGGTTGATTTGATTTGTTTGCTGTGGCAGGAATTGCTTGGAGAAGTA
CTGTACGGAGGTGCAAAGGGTGGCGGGCGAGCTGCTGGGAGCCATGGCGGAGAACCTGGG
CGTGAAGGACCACGCGAGCATGACGAGGCTCGCCGCGGCGCAGGCAGTGAGGATGAACTA
CTACCCGCCATGCCCGGAGGCGCACGTGGACAGCGTGCTGGGCCTGTCGCCGCACTCGGA
CGCCGTCGGGCTGACGCTGCTGCTGCAGGTGAGCCAGGTCCCCGGGCTGCAGATCAGGAG
GAAAGGCGGCTGGGTCCCGGTCGCGCCGCTCCCCGGCGCCCTCGTCGTCAACGTCGGCGA
CGTGGTCGAGGTGTCGACCAACGGGAGGTACAGGAGCGTGGAGCACAGGGCGGTGGTCAA
CGCGCGCGAGGAGCGGATGTCCATCGCGACGTTCCACAGCGGGAAGTTCGGCACCATGTA
CGGGCCGCTGGAGGAGGTGGTCGGAGACGAGGAGCCGCGGTACAGGAGTGTCAGCGTCGA
GGAGTACGTGAAGCTCGTCGTCTCCAGCAAGCTCGACGGCAAGAACATCATGGACGCCAT
GAAGATCAGTTGATAGCGATACATGATCATCATTACTGTGGTGTCCACTGTCCAGTGAAG
TCTGTGTTAATGATGGTTGAGTTGAGGCCTGATTGACTCGTGCAACGCAGTATTAAGGTG
CAAAAATGCTACGGACGTTTACAGGCTAATTACATTTACAGGCTCCTTTCGTCTAATCAA
ACCTGACCCCCTGATTTCAGCTCCACAACTAGGGCTGCCAGGAAAGCTCGAGGCTCGTGA
GCCGTTCGAGATCGACTCGTCTTTTAACTCGACTCGAGATCGACTCGAAAAGAAACGAGC
TGAGTATGAACAATATGGGTAGCTCGATCAAGAAACGAGTCGATCTTGAGCCAATACTAG
CTCGCTCGATTTTAGATCGATAGCTCGGCTTAACATCATCATGTTATATATTAAATGGGA
ATAGAATAATTTATTACCATATATGTTGTCCATGATTTTTCTAAATTTTATTTACTATCA
AACATGGAAGTTTAATTAAGTGTAGAAGAAATTTAGGCCTTATTACGGTATATGATCGGG
TGTGCATTAATATCCTGTTCCTTTTGGGCAGTATTCCCAAGCATACGCTCCTTGGTTTTT
CTATCTTTCTTCCAGGAAGACCAACATTTGTGCAAGATGAGCTCTTCGAAGAATGAAGTG
ATGGTTGTAGAATCGATTAAAGTAAGCCCTTTTTCCATTTTCACATTGAAAGATATCTGG
ATACGTCTACGGTTCTTTCTTAAGATCCGAGTTATGGTTACACTATTCATGTGTAAAATA
CTTTTGGATATGGTGCATGTGATTCGGCGTACTGTAAGCCGAAGTAAACATTTCTTTTAT
GGTCTCATTTAGCTCGAAAGTAACTCGAGATCGTTACAAGCTGAGCACGAGTCATGTTTT
ACGGCTCGATCTTGAGCTTCACTCAGTTTGAGCTTGCTTGAATTTTAATATGAACTGAGT
CGAGCCAAGTGCAACTCGCTCGAACTCGACTCGTTTGCAGACCTATCCACAACCGACTAT
TCACGGGAAGAACTTATTACCAAAGTACCAATTCGAGCTCGAACAAGAACCACCTCTCGT
ATCTTCATCACAGCTATGGCTGCTGGGAATAGACTTGAAGGGCGTGTTTGATTGTCTACA
TCGCTTTTTTGCTCATTTGCATATTTATCCTAATTGAACCTGGTTGAGCATATACTCCAT
CCGTCACGGTTTAGAAGACGTGCATGAGATTCTCTAGAACCTAGGTGGTTATTGATTGAA
TGTGAAATGAGTTAGAAAATAGCATTCACACTACGCATGCATATAGAAGTAGTACAATGA
AGTACTAATTAGATGCTAGGAGCAAATGCAATGCGCCTTAAACCTTGTCTATTGT