| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_245260
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_35004 |
1 |
318 bp |
MLOC_35004.1 |
Available |
Available |
LOC_Os05g02130.1, FRAME:-2, EVALUE:3e-26, 13105.m00169 protein ankyrin repeat domain-containing protein 28, putative, expressed |
| MLOC_35003 |
1 |
617 bp |
MLOC_35003.1 |
Available |
Available |
LOC_Os10g34910.1, FRAME:-3, EVALUE:1e-57, 13110.m03118 protein secretory protein, putative, expressed |
CDS Structure of MLOC_35004
CDS Structure of MLOC_35003
Contig Sequence (2800 bp)
>contig_245260 2800 assembly3_WGSMorex_rbca.fasta
TAAGAAGGAAAACCCTTTTCCCTCTTATCCGGCCATGGAAAAGGACCCCACGCAGGGGCG
GACCCAAGTACAACCGAGTGGGGGGCCACATCCCCATTCAAAATTTTGAATTCCCCTTGT
ATATGTGCATATTTTGAAAGAAAAGACTTTAAAATCAACAGATTTATAGAAGGTGTGCCC
CCGGTCATAATTTTGTCTCGGTCCGCCTCTGCCCCCACGGCCGACTCTCTCGCGCCCTCG
CAGCTCTCTCTTCCGCTTAAACTCTAGCAACCATAACAATTGGTGTTATTATCTCAAAAA
TAAAATCCACTATCCAGTAAACGAGCATAGCATTCTCTCTGGTCTTTCCATTTCTGGAAA
CGTGGCCACTAATTTACGGCTACTACCGCGATCAGCCGCCGTACTTGGCTTTGTAGTCGT
TCCAGAGGTCCTGCACGCTCTTGCCCAGGATCTCCACGAAGTAGTCGTCGCTGTACCCGC
TATCCTTCATCTTGCCGTTGAGCTCCGCGACGAACCCGGGCTTGATCAGCGAGTCGCAGT
AGTCGAGGAACCTCGCCGTCACGTCGTAACCTCCGTCCCAGCTGCGTCCCTGCCCCGGAG
CCACCCAGTGCGCCGGCGCGTACCCGGCCTTGAGCCTGACGAAGTCGGCGACCCCCTCGA
AGACCCACCAGTGCGCCCCGTAGTCCTGGAGGCCCCACTGCCACACGTGGGTCGCCTCGT
GGTACAGCACCCCCGTCACCTCGGCCCTCAGGTCGCCGGTGAAGCGGGCGACGTAGCCCT
CGCTTAGCTCGATGGCGCTGCCGCTGGTGGAGGCGATGCCTCCGTCCGTGTCGTCGACGA
CAACGAGGGTGACGGCGCCGCCGCCGTCGACTGGCCTGCGGTTGGCCTCGCAGGCGCCCG
TCTGGTTGAAGACGTTCCAGATGAAGGAGGAGGCCTCCGAAAGGACCTGCTTCGCGTACT
CCGCGCCGTACTCCACGTCGAAGCGCTGGCCGCCGGGGGTCGTCGACGCGTTGTTCGTCA
CCTCGAACGTGACGGCGCTGGCCGTACCGACGACGAAGGATAAGACTAGGGTCGCGACGG
CCGCCATGGAAAGCTTCATTTTGTGCGCTGCGACGTGGTAATTCTGTCACCGGACAAGTG
GTGGTCACCGGCGGTCTGTGTGATCTGTGATGTTTATAGGCAGAGCCTTCCTTTTTTGTT
GAGTTTGAGGATTTGTCCTGAAATGGCCTGCGAGGGCATCCTGCCAAGAAGGCCTGGCCG
GCAGATTTTCTAATTGGAATTTGTACACGGTTGTTTCACATAGTACAAAGAGTTCATTTG
TTGCTACTGTCGTTAGCTCCCTATTTCATTAATCTGTTACTACCAGATCGGTCCTCATGA
ATGTCCATGTGTCCATTCGGTTTAAAAGGAGTAAATCGTCAAAAACTATCACATTTCACA
CAACGTGTCCAGTGGCTACCACTTTATGATTTTGTGTAAAGAACTATTAAAATTTTTCTA
ATCTGTGATAAAAAACTACCAATCTTTTTAACTGCCCATTTAGCTGTTTTTCTGACAAAT
CTTACCCACATGTCAGGTGCCAGGCTGGCTAACTTTGCCGGCCCCACGCAGACGGCCGTT
AACGGAGACGGCGAGCGCGCACCACGCCGGTGGCCGACTCGTGAGGCTTCGTGCGCTTCG
TCAACGTCCGGGACGAGCACAACGCCACGCTGCACGTGGCCGCCAGGCAGGGCCGGCCGG
AGTGCGTGCACCTGCTGCTCGAGAGCGGCGCCATCGTCTTCGCCCCCAGCTCGCCGATGA
ACTTGAGCGGCGACGGCCACACCATGGGCTCCGTCGCTGCGGGGTTCAGCAGCGCCATGC
ACGCGCCGTGGCCGCGCTTCGTTGCCACCGAGTACGCGATCCGGCCCGCCGAGTCCCGGT
GCACGCGGTCGGCGCCCCACGCCAGCAGCTCCCGGACGCATTCCAGGCTGCCGCCGCGCG
CCGCCAGGTGAAGCGCCGTGCTCCCCGGGAACCCGTAGGATCCCGTGGGGGCGGAGACGA
CGGCGCCGCTCTCGAGCAGCAGGTGCACGCACTCGGCCGGCCCTGCCTGGCAGCCACATG
CAGCGGCGTGGCGCCGTGCTCGTCTCGGACGTTGACGAAGCGCACGAAGCCCCACGAGTC
GGCCACCGGCGTGGTGCGCGCCGCGGCGAGGATGGCCCGCGGGCAGTCGGCGTGGCCGTA
GTACGCCGCGTGGTGCAGGCACGTCCGCGCGTTCACCGAGTCGAACATCAGAATCTGGCA
AATCGAAGCTCAATCAGGGTCAGTACATCGGAATCCATGGAAGTCGTCGCGAGGTAGACG
ACGAGTACAGATGATTGAAAAAGACTGCGGATTTGGAGGGAGGCGTTACTGACATTGGCG
CCGGCGCGGAGGAGGGCGAGGTGGGTGGCGGCCAGCATGAGCGGGGTGCGCTTGCGGCGG
TCGACAACGTCGGGCGGACGCCACGGGCGAGGAGCATGTCGACGGCCGGGAGGCAGCCGT
TGGCGGCGGCGACGTCGACCGCGGTGAGGCGGACGTAGAGGGTGGAGCGGCGGGCGAGCG
CCGGGTCGGCGGCGAGGAGGCCGTTCAGCGCGTTGAGGTCGCCGGCCTGCGCGGCGCGGA
AGAAGTCACCCACGACGACTACCAATCTTTAGGATCAACTAGCAAAGGCCGTGCGTTACA
ACGATAGAAAAATAATTATAATATTTAAAGATGCTGATCATATTAGGTCCTTAAATTTTT
AAGACATTTTTTAAAATGCATGAACATTTTTTGAATTAGC
