Contig Data
morexGenes
Links



Map Locations of contig_245248 (2293 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_245248

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34998 1 505 bp MLOC_34998.1 Available Available LOC_Os01g37910.3, FRAME:+2, EVALUE:1e-28, 13101.m14942 protein vacuolar-processing enzyme precursor, putative, expressed





CDS Structure of MLOC_34998






Contig Sequence (2293 bp)

>contig_245248 2293 assembly3_WGSMorex_rbca.fasta
AGTTATACGATCCCTCCGTTCCTATATATAAGTCTTTTTAGAGATTTCACTGTAGACTAC
ATAAGAAACAAAATAAATGAATCTACACTCTAAAATATCTCTATATACATTCGTGTGCAG
TTCGTAGTGAAATCTCTAGAAAGACTTTTATTTAGGAACGGAGGGAGTATGTGGAACACT
TGGAGCGTAGGTCAACCTTTTTGGTAGGTCTTAATTTTAATTTTCTTTCTAATTTTTCTT
CTACTTGGAAAAGGTTGTTTAAACTATCCAAGATTAAATATAAGGTGTGTGTAGATTTTT
TAGAATTTTTCAAATTTTGCTGGAAACTTTTTTTGGCCCAATTTGGATTTTTTTCTTCTA
GTTTTATTTTCTATGGGCCAGATTATCGAGACTTTCCATGTAAAATTGACCCAAAATGGC
TCTGGGTTTGAATTTTTCGTTCTAACTTTTCTTGTACTTCAAAAAAGTCGTCCAAACTAT
CGAAGATTGAATATAAGGTGGGTGTGGATTTTTGAGAAGTTTTACAATTTTTTCTTGATT
TTTTTTTGGCTCAGTCTTGACCCAAATGGCTCTGAATATGGATTTTCGTTCAAGTTTATG
TTTTCTACTAGGCCAGATTGACAAAAAAGTGTACAACTTCTTATTTTTATTTTTTGAAAA
AAAATCTGGAAAATTTCAATTTTTGGGAAGAAATTGACCCAAAGTGGCTCTAAATTTATT
TCTTGGTTCCACTTGGAAAAAGTTTGGAAGACCACCTCAACAGGCACTGCCCCGTAGCTA
TATCAAGAAGCAGTACCGTGGGAAGACCACCTGCTACAAATTTGGAGCCTCGCCGAGCAA
GGCGTAGGCGTCCGAGCCTCTCCTTTCCCCTTCCGTTGTGCCATGGATGCAGCTGGGAGT
CTGCGTAAACCACGAAGCGCTGTCGCCGGCTAATTCATGGTGCTAACCTCCATCGCCGGT
GCCGAGTGCGTCATCGTGAGTTGAGTTGATCACGCTTCTCTGTCCTCCTCCTTCCAAGTT
CCATCATTTGCAGAAGCTGCACAGCGAAGAAACAATAGCGTACGAGAGGGTCTACACTCT
ACACTCTACACCCCTCTTCCATCTTCCTTTCCTCTTATCATTGTCCGATAATTCATGACG
CTAACCGCCACCGCCGGCGCCGAGTGCGACCTGCGACGTCGTGCTTGGTCGCCGCCCAAA
TCACGGCACTTAGCAAGTTTTGGCGGGCATTTTGAAGCCAAAGATGGATAATTGTGCAGG
CCACGCAAGTCCCACTACGGATACTGAGGTGCCTGCGCCACGCTACGATCACACTTCAAT
CCCTGGCTCCCTGCACGCCGCCGCGGCTATAAAATGAGGCGTTACCCCCCACCGGAACGA
TCACACCTCACTACTCTCTGCCTTCTCTTCCTCTAGCACTCTAGCACACGCACATGAACT
CGAGGGTGGCGATGGCTGCGTGGTGGCTTTGTGGGTTCCTCCCACTCCTGGCGGTGGCCG
CGGCCGCCGGGGAGCCGCTGATCTGGCTGCCGGCGGAGAATGGGCATGCCCCTGCCCCTG
CGCCTGGCCCGTCAGCGCCGGCTGAAGAGGTGACGAAGTGGGCCGTGCTCGTCGCCGGCT
CCTCCGGCTACGAGAACTATCGGCACCAGGTGAGACTCCTCAATGCAGCTCGTACTATAT
GAAAATTTTGGTAACGTTAACGTGTGCTTTGCTCAACGATTGTTTGTTGCGGTGCTGTTG
ATGCACGGCACGAAGTACAGGCCGATGTGTGCCACGCGTACCAGATCCTGAAGAAGGGAG
GCCTCAAGGATGAGAACATTGTGGTGTTCATGTACGATGATATCGCCAACAGCCCTGACA
ACCCAAGGCCTGGAATCGTCATCAACCATCCCAAAGGCAAAGATGTTTACCATGGTGTTC
CCAAGGTACGTATTAATTATTGGGTTTGCCTACGTCTCAGTCGACTGAGATTTGGCAAAG
TCTCAGTCGGCTGACGTGTCATGCATGTCGCCCTTCGCTCTGTTTCGCTGAATCAGTAAT
AGTAGAAAGTAATATCGTTAGTTCGTAATTTCTTCATGTTGGGCTGGATCGGTAGTTTCT
TTTTTTTTTTCTTGCTATAAGGCCTCATCAAGCCCTTCGCTCATGGGCTAGCACAATCAG
CTTCTTTTTATTTGGCAGATCAATTTTACAACCTTCACTTTCGATCCATTTTCCTGCTTT
CCTCATTTTTTTTATTTCTTCTTACATTTAAAAATTATTTTGTACTATTAATATAAAATG
AAAATTGACAAAA