Contig Data
morexGenes
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Map Locations of contig_245162 (2104 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_245162

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34981 1 482 bp AK371984 Available Available None
MLOC_34980 3 1079 bp MLOC_34980.2 Available Available LOC_Os01g16146.1, FRAME:-3, EVALUE:8e-19, 13101.m01794 protein phenazine biosynthesis protein, putative, expressed





CDS Structure of MLOC_34981






CDS Structure of MLOC_34980






Contig Sequence (2104 bp)

>contig_245162 2104 assembly3_WGSMorex_rbca.fasta
GCACGGCCCGTTTGGCCAGGTATGACATGAGCATAATTAGGTATTGGGACTTGGGAGAGG
CAATCATGCACTTACTTGTAGTTAGCTACATATTTTGATACAAAAACTGGTTGATGATGT
AAAAACTATAACTGCCAAGTTAACACTACTAATTATGAAATTGAAAATCTAGGAGAAGGA
AGGCTAAGAACAAGCTGGAAGTAGACAACTCAACAGACTACAAGAATATGGTATCCAGAC
TGAAAGATGTAAACACTACACATGAGCATAATTAGGTACTTCGACTTGGGAGAGGCAAAC
ATGCACTTATTTTTAGTTAGCTACATATTTTGGTACTCCCTCTGATCAGCGTCAATTAAT
ATGGATCAGATGGAATACAAAAATTGGTGAATGACGTGGTAAGTTCAACAAGCTTCGCCA
TTTCTATATACTTTGGACTAAGAAAAGACATCACCTCATCTATCCCAAATTTTGGGAAGA
AGAAACGTGTAAAGAAGTCATAACCAGATCCAGCAGGCGCCGGTCCTGTAACAATGAGAC
CCCTGCAGGCCAAGTTTCTAATTTCATCGATGCTAGGAAGGATATCCACAACTTCTTTTC
CCGAAGAAAGTTCCACCTGAAAGCCATGCAAGATTTGTATTGACAATTAACGTCTGAAGT
AAAACTGGCCTACGATTAGCAATATTTCATAAAACGGGGCCAAGAGAAATAGTTGTTCAG
CTCATACATTCGTACCAGCATGCTCCATTATAAAATGAAGTTGATCCTGAAATGTAACTA
TGCAAGCAAAAATAGGGGGAGAGAAGGTACAATGAGGTCCCCGTCGGTCGCCGATTTGTG
AAGCTGACAATGGGTGCACCGCTTAGGGTCTCCGGAATCAACGGCATTTCATTGCAGTCC
AGAAAGCCAATCATGGGGAAATCCAGCTCATAAACAGCTTCCCCTGCTTGTCACCTGGGA
CGCCAGTGTTCCCTGGTGCAGGAACTGTCTTGGCAGTTAGGGTCCCGGACCTGGTCGTGA
ACTCCAGCTTGCCATGCTCCGGAAGAACAGTCGTGAAGAGGAAGTGCGCAGAGGCCAACG
TCGCGTGGCCGCAGAGGTCAACCTGAAAACAATGAAATGATGAGTCAAGGTAGGTTACTG
TGCAAATCGACTGGTGCAGAAGTTCAGGTCGATACTGGTCGTAAGAGGGGGCTCTGGGAT
CTGTGGACGAGATGGATGGGGAGCTAGGATACCTCGGTGACGGGAGTGAACTGTCATAAT
TTACAACAGGCTTTTCGCTTCTCGAACCATTTCCTAAGTGATCTGCTGCTTGTACTTTCG
CTACAATGATGTAGTGATACAAGTAGGATCTGAAGGCCTTAGGCACTACAACAAAAGGAA
TATAGCTGCCATAATTTAGAACATGATTTTGGTTTCTAGAACCATTTCATGCCCAAGTAA
TCTGATGCTTGTACTTTCGCTACAATGATACAACGATATAAGCATGATCTAAAGGCATTC
AGAAAACCTTCGCCGTTCAGGAGATCAAACTCATCACTATTACTGAAGAAGGGAAAATCC
ATGTAATCACCTTCTGGCATTGATGCATCATCTAAACCAGGCATGCAAATCCCACCATCT
GCTTGCAATGCTAGATGGTCTATGTTGGCTGTCTTTATTTTCTTACCATCAGCAAGAGTG
AGTGTGTCTGTTTCATCAACCCCGTTCCAGATTGCTTCTCCACTGTTATTAGGAGGGAAA
TGGACGTGTTCCACTCTAACTTGATCAGTAATCAACATTTCTTTTGATTCTGCTACTTCA
TTGCCGCATTGGTTGCTAGATGCCAATTGCTGAAACTGCATAGAATCCTGAAAATCTGTA
ATATCTCTAAGAGAGACATTGCTCACTTCACTTGGCTCAGGAACTTTTTGTGCGTAGGCG
TCATACATTTGAATGTCCGAATAGACATATGGTGCATTATTGGTGGCATCTTCATTTTTT
ATCATGCTCCCAGGATGCTGTGCATGGAAAGAATGACCATGTATTTCAGGATGTGTTTGT
TGTGCACCACTGTAGCTTCCACCTACTTGCGCATAACAGCTCACTGTACTCATCCCTGGT
TCAA