morexGenes - Barley RNA-seq Database

Contig contig_244892

Source Contig contig_244892

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_244892 (1949 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_244892

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_34901	2	695 bp	None	Available	Available	None
MLOC_34900	1	492 bp	MLOC_34900.1	Available	Available	LOC_Os03g02030.2, FRAME:+2, EVALUE:2e-11, 13103.m00147 protein folylpolyglutamate synthase, mitochondrial precursor, putative, expressed

CDS Structure of MLOC_34901

CDS Structure of MLOC_34900

Contig Sequence (1949 bp)

>contig_244892 1949 assembly3_WGSMorex_rbca.fasta
ATATTTAGGAACGGAGGGAGTATGCAGTAAAATATGAGAATGAACAAATAGCTATATTTT
CTTGTTTGGCTTGTTATTAATCTCTGGATGGACTTTATGTTTGGCAAACCCACACATTAT
TCAACAGCAACAGCGTATGTATAGTCACTAACATTTAAACTTGGCAAAAAATTGATGCAG
GCTGCTGGTGGACGTGGTGGTGGTCCCCCTGTTGGAGGAGGACGGGGTGGCGCGCCTCCC
GTGAGGAGGTAGATGATGTGAGCCGATCCACTGTGTGGTTGAGGAAGGAAGTTGCTGTCT
TTACTAGCGAAGTGAAACAAACTGCTGCGGCGGCCATGCTTGTGAGCTTTGTGATGTGCC
TCTAGTTTAGTTTGTTGGTTTCTGCGAACCGATTTTCTCTATGTATGATGATGATGTATT
GCTGTTGTTAGGTGTAAACATGAGACTTGATGGTTCGTTGGAGGCTGTGTCATTGCAATG
GATTATCTCTTGTGAAGCTTACTGCTAGTTAATATGTGTTGAACTATGACCATGATATAA
TCAAGTAGACCGTATCATCCCTGGTTTGTACGGCTGATGACACTTATTCCATTGCACATC
ATCATCGTCATCATCTTGTGATTACTTCCCTCGATTGACATGTGTCTAGACATGTTATCT
GTACTTCTGAAATCTCTCCAAAAATCAAATCGAATAACAACAGTAAACGACGCTCTGGAT
TTGGATTGATGCTGGAAGTTATTACATGGTTACATGATGCCGCCCTTGGCACAGTGTCAT
GAGGAATTTGTCGGTACAGAAACTGAAATAGTGAAAGCGGAAGGCGGGAAATGGATGTAT
AAAGGTCGGTGCCGAAACTGGTTGTTTGATTAGGGTTTAGAAGGGATGGAAAAGGAGAGG
ATGTTGCGACGATGAAGCTCTTTTTATGTGAGTCGAGTGACGGCTATGGGCATGTGGCGA
TCCTCCTCCTCCTTGGAGCCGGCAGGTGAGGATCGATTCCTCCTCCTCTCATATATGCTC
CTCTTCCTCTTCTCAAGACAAATTTAGATGGCATGGGTTGTGCATATGTGTTTTCATTGT
CTTGTGAATAAAGAAGGCGCGCATTGCTTTAAGTTTGGGCCTTGTGCTTGGCTTACGCTT
ACGCTTCTGTTTTCCATGGATCCTCTTGTCGTAGCATCCGAGTGCTTGCCCTCCTTCTCC
TCCCTTACCCTAGCACCTACAGTTTTGAAAGCGTACTCCTCGCATACGCCTTGTCGTGTC
GAAAGCGGGCTTTCGGGGACAAGAAAACAATGCTTGAACGACATTAGGTTGAAAAAACCG
GGGCCCGCTCGTCAGCCGAGCCGAGTTGGTGGAGTCCACGCGAACTCTCTCTCTCTCTCT
CTCTCTCTCTGACTGACGACCAGCGATGCAGCAGCGTTGCGGCGCCCACCACGGTCACGG
TCACGGTCACGGTGGCACCACCACCACCCCCACCTACCCCACCCTCGCCCCCACTACAAC
TGCACGCATCACCCGCGGCCGCGCGCCGCCCATGCCTCACCCCCCTCTCGCCGCCGCCGC
CACCCTCCGCCGCCGCCTGCTCCCTCTCTCCTCGCCGCTATCCTCCTTCTCCTCCTCCCG
CGTCCGCCTCCTCCTCCCCCGCGCCATGAAGTCCTCCTCCACCGCCACGCGGCACGCAGG
TCAGAGCAGCGCCACTCGATCGTACCTGCTAGATTCGTGGAGTGGCGCTGTTGGTGTTGG
TGCCCGTTGGGCTGGGCTGGGTACTGTACTGACGTGCGTGCGCCGGGATGGGGATTGGGG
ATGCAGGTGCCGCGGCGGAGGGGGAGTACGAGGAGGTTCTGGGCCGGCTATCCTCGCTCA
TCACGCAGAAGGTGCGGGCGCACACCGGCAACCGCGGCAACCAGTGGGACCTCATGCACC
GCTACCTCCAGGTCCCTCCCCTCCCCCCC