Contig Data
morexGenes
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Map Locations of contig_244794 (4437 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_244794

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34860 1 1890 bp MLOC_34860.1 Available Available LOC_Os08g42920.1, FRAME:+3, EVALUE:2e-128, 13108.m04644 protein 60S ribosomal protein L7, putative, expressed
MLOC_34859 2 386 bp MLOC_34859.1 Available Available None





CDS Structure of MLOC_34860






CDS Structure of MLOC_34859






Contig Sequence (4437 bp)

>contig_244794 4437 assembly3_WGSMorex_rbca.fasta
ACACCGTTTGACCAAGTTTTACCAATAAGGCAATGAAAAAGCAACTATGGCAAGAAACAA
CTGGTAGTTATCAACTTGTGGTAAATACCAGTTCTGGAAAGCAGAATAATATCGGTCAAT
AGCCTATTTGGTTTTTCTTCATCCCAAACCATTTTTCCATGAATGAACAACATAAGTGAA
AAAGGAAGAACATTCACGGTTCAATTCAGAGCAAAAAAAATAAAATAAAAATTGTGCAGC
ACAGCACTTACGTTTGTTTCCTTGGTTTGCCCAACATGCAATGCCTCCATCTCCTTGGTT
GCTGCATCCGTGCTACCCCCAGCCATATCGTATGTTTCCTAATAAATCTCAAAAGCTGAA
TGAGCAGAACGAACATCATAAGCACCAATCAATCCGAGGATAAATTGCGTATAAGAGTAA
AGCTATCACCCTTTATTAGAAGGAAAGGAAGATCCTATACAATCCGATTTGAGTCCTTTG
CGAGATCACCGGCAGCACGAACATAAACTACAGTATATATACCTTTTATGGGGGAGGAGA
ACCTTCGGCGCGCGCGGCGGCCGTCGGCAGCGGGGTCACAGGGCAGAGGACGGCGTCTGC
TGTCGCGGCGAGGACGTCTCCCTCCGCCCGCCTGATATCTGCCGGGAGGAAGAAGGGGGT
GACGGCTAGGGTTAGACTTGGACCACGAACGAGCGAGAGCAACAAGGTTTTGTACGACTA
CGACCCAGACGCGAACGGAACGGGGAGAACGGAGAAGCACGGCACCTGCCAAAAATGTTC
ATTTTCCCCCACCCAACTGGGCCTCCTCAAATTGAAACCCAGCAAGTGTTGTACGGTCGG
CCCTTGGCCCAGCCCACTAAGCGCTGCAAGACCTTAAGACCCCAGCAGCGAAATATCGTC
AAGTCTCTTCCCAAACCCTCCCCGACCGCCGCCTCCGCCGCCTAGCCACCCCCCACGCGC
CAGGAGAAGAGAAGCCAGCGCCGCCGGCCATGGCGGAGGAGGAGGGGACGCAGCAGCTGC
CGTTCGTGCGGGAGACGGTCCTGAAGAAGAGGAAGCAGAACGAGGAGTGGGCCACCAAGA
ACCGGGAGCGCAAGGCGGCCAAGAGGCAGCGCCGCCGCCACGACGCCAAGGGCGCCATCA
AGCGCCCCGAGGACTTCGTCAGGGAGTTCCGCAACAAGGAGCTCGACTTCCTGCGGATGC
GCACGCGCCTCAAGGTCCGCAAGCTGCGCCCCGCCGAGCCCGTACACGCCAACCTGCTCT
TCGCCATCCGCATCCCAGGGTCAGTGCCTATACCTAAAGCATCCACTCGTCTGTCTTGCT
CATAGTGCATAGCGATTATTAACGTCCAACTCTTCGTTGTCTGATTGCAGCACTGCCGAC
TTGCACCCGCAAATCAGGAAGATCTTGGCCAGGCTGCGGCTGACCCAGGTCCTCACAGGA
GTCTTCCTCAAGGCCACCGAGGCAAACCTCAAGAGGCTTGCTGCTGTTGGGCCGTTTGTC
ACCTATGGGTAATTGAATGAAGATATCTTCCCCATTGTGTGGCTTGTTTCGTCAGTTTGT
AGTTTACAGTGATTGAATGTTGTTAATAATTGGTGTCACGATAGGTTCCCCAATTTGAAG
AATGTGAAGGAGCTTATCTACAAGAAGGGTCGCGGGTATTTCGACAAGGAGCCTTTCCCC
CTTACCAGCAATGATCTAATCGAGAAGGTATAATAATATCTGCGCCATCTTCTAAAGATT
GGGGTGTAGGCATTCGATTCAAATAAAGCTTTGGCATGCCTACGGCTACCTAATAACATT
AGGCATAGGAAGTAACCAGTTCCACAATTGCTAAGAAACTTGAATACCTTCAGGGATCAA
TTGTGGACTAATAATAGTAATTTTCAGACTCTGATGCACCGAACATAACACATCCAACAC
TTTTTTTGGATAATTATCGTCGTTACCATGTGCGTTCCTGCGGCAGAACTATTTTCTGAA
TCATCTCTTATGATGATTTTGAAATGGACACTTGATAATCGTTACATGTGCTTCTTGAAA
AACAGGCTCTTGGAGAACACGGCGTCATATGTTTAGAAGATGTCGTACACGAAATCTCCA
CGGTCGGGCCGCACTTCAGGGAAACGGCGAGCTTTCTCATGCCCTTCAAGCTCAAGTGTC
CGGAGAGGAGGCTGCAGATGAAGAAGAAACCCTTCAAGGATGGTGGCGACTCGGGCAACC
GCGGGGACAAGATCAACGAGCTACTCGAGAAGCTGAACTGAGGCAGTCTCAAACCTGCAT
CTGCAAACAAGCAATGGATCCGTTATTACCGTGTCGGTTTTGTAATAGCATAGCTGAATG
TACCTTTGTTTCGGAAACCCTACCTGAGTGTTTGGGATCAGATCACGAAATAGCAGAAAC
TGTTCTTGACCCCTGCCCTTGTTGTGTGCTCGCTCTGCGCTTCGTGATCGATCTGCTGTG
CTTTGCTGAAACTAGTTTTTTACCTTGTTTGCACTGACAGACTTGCCTGGGTAGTTGATT
CCTGCACTTGGATGATATTGCAACAAAACATCAGGTTCTCTGGGAGCTCTGTACTTTAGC
TATTTTGCCAGACTTGAGAACACTATCTTTTTGACAGCAATTCTTGATGCCACATTGCTG
ACTGCATCGGTACCACAACCAGCTAGCCTGTATCCGTGTCCACGGCTACGATGGCCGTGG
TGGCCGGCGAGACGCCGCAGTCACGCGGCCTGTATATGCCGCTCGTTCGCTGGTACTCGG
CCCAGCCACTACCTGGTAGCTTGGCGTCCTCGTTGCCTTACCCTTCCAAAGGAGCTCCTC
CATCGCCTCCACTCTCCGCAGCCCAGCCTCCACCTACCGCAGCAGCAAGTGCTCTCGTCG
CGCGGCGGCGGCGGCGGGGAGGATGTCATCGGCGCCGGCGCCGGTGTTCGAGAGGATGGC
CGGGATCCGACCCCTCGCCGAGTCCGGCCGCTTCAAGGCAAGCTCCCCGACCCCGCGCCC
CCAGCCTCCTCGCACAGAATCGCCGCTCGTTTTGCTCATCCTCCATGTAGCGGCAGCGCT
AGGAGTAGAGGCCCCCCATGAATTGGTCTTGCGCTGCTGATTCGGATTAAATCACGCATA
GGGTTCATATATACTGTCTGCGGAATTTCAGCTGGAAATTGGGGAAAAGCTGCTTCCTCT
GCCCATAGCATCTGGTCCTTTTTATCGCTAGGAGTGCCCATACTCCATACCATTTGCGTC
TGCTGCTATCATTTGTTCACAGCCGAGTTTGTCTGGCAGGCATGGTTCCTGGACCAGTTC
GGTGTTCTTCATGACGGGAAGAAACCCTACCCTGGCGCCATTTTGGCATGTATGTTGGTC
CACACGTCCTCCTAATTTATCTTCGCTTTACTGTTGCATCTGTGTGCTGCATTGTGATAG
CCAACTGAGGCATGGATGTTTCAGTGGAGAAGCTCGCTGGGAATGGCGCCAAGATGGTGA
TAATCAGCAATTCCTCGAGGCGGTCGTCTGTAACCATGGAGAAGCTGCAGAGCCTTGGGT
TTGACACGTCTTGTTTCCTCGGGGCGATCACCAGCGGAGAACTCACCCATCAGTACCTTC
ACAAGTAAGCTTTTTATGCTGGTCTTTCTTCTGTGGTTATTTGGTTAAACTTCTGATTTG
GTTTCGTAAACATAGGAGGGACGACCCATGGTTTGCAGCTCTGGGAAGGAAGTGTGTCCA
TCTGACATGGGGCAATCGAGGTGCAATTTCTCTAGAGGTTTGTTCTTCTGTTGTTTTACT
CTAGCAGTTGTTTCTTCTAAGGAATGTTACCATCGAATTTGGTGTGGCATACTCATATAT
TCCTGCCAAATGGCTGAGGTCATCTAACATGTATGAAGAAGTATTAAGAATTACAAGAAT
GTGATGTCAAAATGCAGTGTTACTTTTTTTTTGAAAAGGAGGACAGCCTCCGGGCTCTGC
ATCAGCGTGATGCATGCAGCCATATTATTTAATAAAGTGTGGTAAAAAAAGTCTGAGATC
TTAAATATGCTCACAGATGGACAGAAACAAAAAAGTAATGAAAACCGCCACAACCGACGA
TAAAAAATAGGCTACGATGACTATACACCTAACCTATTATTAGCTCGTCATCCAAATCGG
TTGAAGATAGCCCGTGCTATCAACTCCCACCGGTTGCACCCAATAACCAAAAGCTCCCTG
GAGTCTGCATGAGTAGTAACGAACACATACGGATCCAAGCAGTAGCTCTATAGATAACCT
GCAAAAAGTTGGTAAAGTTTTTCCCATTAGATATCAAATCATTTCTTGTGTTCCGTATAG
CCCAAAATAATGCACATATCCCTATCCGAATATGATTTGCAATAGATGAATTGACTTCAT
TGAGCCAAATAACTGTTGGCTTTTGAACGTGCGTATGCAGCTGTACAGGCGTGCCTA