Map Locations of contig_244746 (3678 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_244746

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34840 2 2151 bp AK366280 Available Available None





CDS Structure of MLOC_34840






Contig Sequence (3678 bp)

>contig_244746 3678 assembly3_WGSMorex_rbca.fasta
TGCCCAAGGCACGCCCAAGGGTAATATGCGGCGTTGAAGTTTGGGGATGCCCCGGAAGGC
ATCCCTTTTTTCATCTCCAACATTATCGTTATATCTTACTTGGAGATATACTTTTATTCA
TCACATGATAACCGTACAATCCGAACTGCCGAAGCAACGGTTACACATACTTTCTTTATT
AAAAAATAAACTTTATAGAGGAAAGGTTTACAAAGGGCCTTTATGAGTGGTTTGATGTCC
CTATTATGCCATGTTGCACGTGTGCGCCTTTGCTCTCAAGCGAGGGGTGGGGGCGTGCTC
TCACCGAATGGACCTTTGAGAGATGGTCTTGAGAGGTCGTTGTAACATGTTAGCTTGATG
CTGGGTAGGTCCTAGATGGTACTTGCTATTGTTCGAAGACGTGTTTGACCATAGCTCAGT
CAAACCAAATACTTGATCCTTATGATACGAAATGGAGGAGCTCTTCGCGTGATCCATGGT
ACTTTTTGTGGGTTACCACGATGTTCCTTTTGTCTAATTATATAGTCAAATGAAGTTTCA
TATGCAACATTTCATTTTTAAATTGTCTTGATTATTTGTTTCTCTTGAAGGAAGGAAACA
ACACGGCTAGTCAGTCTAGCAAGTTTCCTTGTTCTCAAACTGAATTCACTCGATACACAT
GCACAATGATACCTATGTCAACATGCACAATGATACCTATGTCAGGGATATTTTCTCTCT
TGTCTCGAAATAAATGATTCAAAAGTGACTATTTTATAATAAAATTAGTAATAAACTGAG
TCATAGGAAATACTTGTTGATGAAACAATTTTTGTGTACGCTCAAATTTTTTGTGCATCA
TCAGTGATATACATAAGGGTGGATGAGAATGGCGTTTTCGAGCTCGGCCTTCATGGAGGC
CGAAATTTTAAAAAAAACCAATATTCAAAAAATATTTCCAAAAAATCTAAAAATAAATAT
GTAACTAAACTAGGATGTAATCCATGTGTGTAATATTTTAGGTTGAAACACAACGTGTAC
AAAAATGACAAATTTATGAATTGAAATGATGAATAGTAACATCCATTCATAAATAGGGTC
TATATTCGTCTTCTATTGGAATCTCTTAAAAAACTTATATTTAGAAACGAAGAGAGTATA
AATCTTTCTAGAGATTTTACTACTACATACAGATGTATATAAACATACTTTAAAATATAG
ATTCATTTATTTTGCTTCGCATGTAGACTCCTAGTGAAATATTTTAAAAGACTTATATTT
ATGAACGGAGGGAGTATTGTTTTGATAAGAAAAACATAAACCATAAACCCTCTCAGGTTT
TTTACCGACATTTTGCTGTCTAAGCTTGATTTGATAAGCAAGGCGACTGTTTATTGCTTT
TTTTAGACAAGCGACTGTTTTTTGCAAAAAGATCCAGACCTGCGTATTTCTTCTCTCGAC
AAACATACCTCACCTCGAAAAGCCCAGGCAAACACAAACGGTAAGTGCAGTGACAAAGTA
ACAGACATGCGACAAACAAACAGGCCTGTTAGATGCTAGGTGTTATTTCACATAGATGTG
AGATAGACGGACCCCAAAATTTTAACCATGACGAAAATTATTTCGCATTCATAACAGAGT
ATATATGAAAAACAGGACTCAGAATCTGAACTAGCAACCGGACGATAAAGCATGCCACAG
AACATGTCTCGAAAAAGGCATCCACAGATAAAACACTCGAGATAACCAGCTACCAAAACA
GCATTCGATGTCTCAGACTCCATAACACGACACAATGACAAAATCATACTTTAGGGTCTC
AAAGGCTTTAGGGTCTCAAAGGTAGGACGATAAAACTGCTACTACTTCAACAAGATGATC
ACTGGCTGACGCCGAGCCACTTGGAGAAGACGTCGAACTCGGTGTAGTCGCTGTCAGAAA
TCATGGTCTGGTACCACGCCTTCCCTGCGGCCTTGATCTTAGATGCCTCCTCCTACAATA
ACAAGAGTTCCTTCTTCAGTACAAGGATGTCATAAATATATGCATAGTAGGAATTTTAAT
CATCACAAATCAGAGAAGTTTAGAAAGGGAAACAGATAAACAAACAGTTCTTCAAGCAAC
AGGAATACTCATATTTGACAGGCAATAATAATATCACGTTCACCTTAGTCCTCAAACAAA
CCCGTTTTCGTAAACTAACAGAAGCATCACTAATATAATAGGCCTTTCCAATGAAGTCAT
GATTAATGGTAAAACAATATTGTCTTGCAAAAAATAGCAGTTTATGTCCTTAAAGAAGAT
TCAGTGCCAAAAGTAAACACAAGTTAAAAAGCAATCAAGCTTAGAAGAAAAGTTAGATTT
TAGGAATGTAACGGAAAAAAAACAAGCATAGTACATACTTCAAGTATTGCAAGCCAAATA
TTGATTGCTTTTTAACTTGTGTTTACTTTATTGTACCAGAACATAACAAGTATTGTACCA
GAACATAACAAGTTGGGCAAGTTCTCCCCAACTACAATTATTTAGGTACACAGGGAGTAG
AAACCAGCAAATTGAGAGAGGCGCCTTCACTACGAATACAAAAGATTAAGCATGCAACTA
TAAACTGAAGTAGACAGAAATACACTATTGAGTCTACGCAATGAACAAACAATCTGTGTG
TTTGCTCCATAAAACAGTAAATACAAACATAAGACACTTTAAACAGCAAGGATCACATAC
TGGGATCATCTAGATAATGAAGGGTTTTAGGCATGCAACGAGCAACAAACAGCATATAAA
CTTGGCAGTTATTTCAGTGCTAATAGGTCAAATAAACAGTATGGCATGCCTACATTATGC
ACATCAAAGCGTATCAAACAGTTGCAGAAATTGCATATTCAAACTATGGTAAAATAACAT
AGCATACATATAAAGCAATCATCATTATATAAGCAGACAAGTATACAAAAAATAAGAACT
AACTAATCAAGACACGCAGCTTGACTGTCAACACAACATTAAACCTCCAACTAATCAGAA
CCTATACCACACAAAACACTACAAGCATATGAACATGGACAGAATTGCTATCATCATAAG
CTGAAAACACCATGCACAATAGATGCATTCATAAATTCATGTTATGCTACATCCAACTAA
ATATAAGGACTTAATCAAGTTAAGTGCGCATATTCAACCAGTACTCAGGAGTAAAATAAA
CTATCTGTAATTATGTGAAGATATGAAACAGATGGCAAAGGGAAGGGAGTAGCATACCGC
GCTGAGCTTGGTCCTCTTGGAGTTAATCTTGTCCTTCCTGGCCTTGACACGGGCAGCCTC
AGCAAGAACTGCCATCCTGCGGGCAGTCCCAAAGTAGGGGTTGAGCTTGAGCACAGCAGC
AGCATTCTTCAGAGGGTTCTTCCTGGCCTCCCTGCGCTTAACCTCCTTGTTGATGGGCTT
CACAACAGACTGGACCTCGTCAGAGTTGATGAGGCGGCCAAGGTCAGCGTTGGTCATCTT
AGGCCTGGGGAGGACGAAGCCCTTCTTCTTGGAGGAAGACGCCTCAAAGGAGCCGTACAC
CTCGTCCAGCTTCTTGAAGGCAGACTCGGTCCAGATCACAAACCGGCCAAGGTGGCCACC
AGGGGCAAGGTCGAGCAGGTTGAGGCGCTCGACGTTGGCAACATCCACACCTGGGAGGTT
GCGGAAGGCCTTGACGAT