morexGenes - Barley RNA-seq Database

Contig contig_244738

Source Contig contig_244738

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_244738 (2185 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_244738

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_34838	2	1886 bp	AK249013.1	Available	Available	None

CDS Structure of MLOC_34838

Contig Sequence (2185 bp)

>contig_244738 2185 assembly3_WGSMorex_rbca.fasta
GCTGTTGCTTACACAAAGAATAGTTGTTGCCGACATTTATGTTGAACAAAGCCATGCTAA
GATATTTAACTGCAGGCAAAGGTCTCTTTTATTTAGTTTCTTTCATGACATGGCTGCCAC
AACTCCTTAGATGTACAAATGCGGCACAACAAGGATTGCATTTGTCCAAACAAAAAGGTC
GGTTACACATAAACAGTGTGAATAAGGTGTGGCATTGCGATCATCATTTTGATCAATCCA
ACTAAAACAGGGAAGGTTCAAGCCAAAATAACTTCTACAATGGGGAAGGGGCCTGGCTTT
TCTCCTTGATGGCCTCCTGGACAGACTTCAGGAGTGATGGCATCAACTGCTTATTTGTGG
CAATGATGCCTGTGTCAACATCAAGAAATCGCCCTTTCGAGAAATCAAGATCGTTTCCTG
AGGCATCTGTTACTACACCTCCAGATTCTGGGGAATACCATAAAAGTGAAAGTAAGGAAA
TAAATATATATCGTTCAGCCGAGTTCCTTGTTTCAAGAGAGAGAGAGAGAGACGTATTAC
CTGTGACGACAATTGCACCAGCTGCATGATCCCATATCTTTTCCTTATAACCCTTGTGTG
GAAAACGCAAGTAAATGGCACCATCGCCACGGGCCAGAGCACCATATTTTGCTTGGCTAT
CTATTCTGACTGGAGGAGCTTGGACACCAAGTTTCTGGTAGCACTCAAACACGTAATTAG
TTTCTACTGAAACGGATATTGCCTAAGCAAAGACTAGTCAAGATCAAACCTCCGCTATCG
AGCCAGTTAAATCATGCATCGTGTGTGCTCCTTCATAAGATTCAAAGAACGAGGCATTCA
CTGGATTGTCGATGGTACAAACACTAATCTATAATGTAAGTTAGCCAGAAGCGAGTCAAT
AATAAAAATAAAATATCTCATGTAAGTAGAAATAGGCTAAACTATTTAAAATCAAAATAA
AAGAGCTAGAAAGTGGTAATAACCTTTTGTGGCGGAGAGCCCTCTAATGACTCTACTTCA
GCACCACAACCAATTGTAGCCGAAAAGAGGGCCCCGGTTTGATCTCCTGATGAGCTACCA
TCAAGGTTGCTTATTAATGTCAAAGGAAGATTTGGACATCCCAACACGCCCAAAACAACT
TTGCCCTCATCAAGCAGTGCCAGTGCGATTGCATATTGGCCTCCTCTCAAGAAACTGAAT
CAAGTTATTAAAACAAAACAAAGATGGTCAAAATGTATTATAGGCAAAGATAGTAACAAA
AGGTGCTGCACTTCATATCTGTTTTTCAGCAAGAAAAAACCGTCATCAAATGACTGGACT
TTCTTGATTGAAAGAAAGGATATTCAATCCAACAAGCTAGCTGATCAGTTGTAGCACTTG
CATGCTATCTCAGAAAAGAGAACCGAATATAGTTTGCTAAGAACTGGTTCACAAAATTTC
CAAGGTAATATTAGCACTTCTACTGCTAGTCATTGTATAAGATTATCATTCCATCTCTAA
CATGGCTCTGATAGGCGTCAGATGGTAATCTCAATTTCACCAAATTGTTCGTGCCATGGC
AGATCAAGGGCAACCCTTCAATCGTAGACTCAAATTTGTTCGAGCATGCATGCACGTCAG
CACCGCCCTTCGTGCGCTCGCACGTCCTGCATGGCAGGAGTGCAGTTGTAGTCTCTCATC
TCTCTGTACTCTGATGTACCTATATAAAGCCCATCGAGGCTAAGTAATAGATGTGAGAGT
GACTGACAACTCAACTAAATTATCAATGTGCTTGATTTAGTCTGCAGCTTAAACTTTCGA
AAACAAATCATAGATGTGCATCATGTTATAATATGAGGACCTACAAAAACACAAAACATT
CTTAACAAGCATACCCTGGGAAAAAGAAAAAGAAAGTAACTTATTTTCTAATAGTATAAT
TGCAACACTTCTTTCAATCATATATTTGCATGAATTTTCGCACGTAAAAAAGTTTTGACA
GGATGCATATCCATGATTTATTTCAAGATTTTCTCAAAATGCACAAGTACCTAAACCCTA
ACCTCAAGAATTAACCCTTGAATCTACATTTGCTTTTCCCTTTGTTCTAATATTGCTTGC
ATGACTAAATTTAACTTCATGAAATTATTCTGCTTTATGTGATTATGGTTTTTTTATTGA
AAAGACAATGTAATAGATAAAACAA