Contig Data
morexGenes
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Map Locations of contig_244705 (5147 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_244705

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34834 1 2225 bp MLOC_34834.1 Available Available LOC_Os05g37660.1, FRAME:+3, EVALUE:0.0, 13105.m03925 protein transferase family protein, putative, expressed





CDS Structure of MLOC_34834






Contig Sequence (5147 bp)

>contig_244705 5147 assembly3_WGSMorex_rbca.fasta
CATACACGTTCACGTAGATATTTGTTACNNNNNNNNNNNNNNNTTTGCTACCACGCACCA
TCAGCTTCGTTTTTTTCTACGATCATATAGATTTTTTTTGCTATATTTTTTTTTGCAACT
GTTAAAAAAATTGTTGCATCGCTCCGAATTTTTGTTGCATCGGGAGAAAAAATGTTGCAT
GAAGATCCAACGGTACAGACGCGCGGGGGTTGGTGGATCGTGCGGCCCGCGCGCGGCCTG
CCGAAGGCGCACCGGCGCAGAGCACTGCCCAAATAAATTTGATAGACTCAATAGTGTTTG
CGGAAAGAGTTGTCCATGGGAACCAAGTTGAAGGTAATTAAGAGTATTACATGCCAAAAC
TTGTCGTGCAACCCCATAAGATACCCCTTTATGTGTCTAAGGAAGAATAGGCACACCTTG
CAAGAAATACTAACAACTATGTTGACCTATGAACAATCCACCTGATTTTCGGCTATTGAG
TTAGTTAATGTCTATAACAAAAAAAATTGACAAGTAAAATCTTCACCTTCTCAATGGGAC
GTGTTTCTCTTGTCGAAAGATGGATGCTCCTCTCACCAATGCAAAAATCATGTAGGCCTC
GTTTGATACGGGGGGATTCAGGAGGTTTCGAGAGGCAAATCCTTGGGAGGGTCAGAAACC
TCACAAAACCTCGGGCTCCCATTTGGTAAGAAGGGTTTGCTTAGCCGAATCCCCTCCGTT
CCCCTTCAATCCTTTTCTATCCATGTGTTTCAGGATCCTCCTCCACAGACTGGTGGAAGC
AAATTCCCGAGGATTTAAGAGGATTGGGTGAAAGGAAAGGATTCATCAAATCCTCACAAA
TCCCCTTCTCTCAAAACCTCCCCAATCCACTTATACCAAACAAAGCCTTAGGGAAATTAT
CCAGTTTATCATGCAACCATGCATGCAAAAAAGGCTGACATGTTTTAATTATATTATACT
TCCTCCGTCCCAAAATAAGTGTCTCAAGCCTAGTACAATTTTGTACTAGAGCTAGTNNAA
AGTTAAGACAGTTATTTTGGAACGGAGGGAGTACTACTTATACTCAATAAATATTTAACA
TCATATGCATTTTCTAGTTTTAATTCTTATATTATTAATTTAAATATTCATGTTCACATA
ATGTTTTTAAATTTTTTTGCAAGCAAGTCCCGTAGCAACATATAAATATTCATGTTTGAT
TTATATTGCAGTATTTGCAATTACTAAACTCTGTTAGATAAATACTGCAATTACTAAACT
CTGTTAGATAAACAAACACCAATCAACGTTTTCAAATACAAATAATAATTTCTAAATTGT
CATATGATATACACTTACATTTATGATATGTATATATTTGTTTTATGTGAAGGAACATAA
TTTAATGTAATACATAGCCAAAGTACCACATTCCAATCCCTGGAAAAAAAGCGCTACTAT
CTTTGCAAAATGTTGAAAAAAAAGTGACACTTTTCAAGATGCATGTCACTGTCAAAAACT
ACCTGGCGAGGATCAGAAAGATATCGTGCTAGTGTGAATTTTCTATGCCAATCCGCAGAC
TTTTCATATTTGGGTAGAATCCTACCAATGCAAACGTGCGCTCAAATGTGACTTGTGCGC
CACCTTTTCCTCGCAAGAGCGACAGGTTTGGTGAGCACTGCACCGATTGAGCTGGTCGTA
AATCATCTTTCTCTATGGTTCTCAGCTTTCTCTGGCCAGGATGAACAACCTCTTATCAAC
ACATCCACTCAAGTATACCCGGGAGCCACAGGCCCACAGCCCACAGACATTTCGCAGAAA
TGAACAGGAGAAGGGCAGATGCACCCACCCAAAACCGTCTCCGTGCCTATATAACGTGTC
GACCGCGGAGCGAGTGCTCAACGCCATCTTGTGTGACGCCATCGCCGAGAGAGCAGCAGC
CACTCCAGTTAAGATGGCTCCGCTGATCACCGCCGACGTCGTGGTGGAGGCTGCGCCGGC
CCCGTCCATGGCCGTGCTAAACCAACTGGTTTGCGCGAGCGCGCCAACGCCGACCATCGC
CGTGGTCTCCAAGCATCTGGTTCTGCCGGAGGGCGCTCAGCCGGTTGGAGACCTCAAGCT
GTCCGTCTCCGACATGCCCATGCTCTCGTGCCACTACATTCAGAAGGGCCTCTTCTTCAC
GCCCGCGGGCATGCCGACTGCCCGCCTCGTCAAGTCGCTCTTGCTGTCGCTGTCCCGCGC
GCTCGGGGTGTTTCCGGCGCTCGCGGGACGGCTCGTCACGCTCCCCGACGACCGCATCGT
CATCCGGTGCGACGACGCGGCCGTCGAGTTCTACCATGCGGTGGCGCCCGCTCTGTCGCT
CGCCGACTTCCTCGTGCCCGACGCCGACGTGCCTACCAGGCTGACGAAAGATCTGTTTCC
CATGGACCGCGTCGTCAGCTACGAAGGCCACCGCCGCCCGCTCACATCGTTTCAGGTCAC
CGTGCTCGGCGACGGCGCTGTCTTTGTCGGCCTCGTCGCCAACCACGCCGTCGTGGACGG
CACCTCATTTTGGCACTTCTTCAACACGTGGGCTGGGCTGTGCCGCGGCGAGCCAGTCCA
GCCACCGGACTTCAGCCGCAACTTCTTTGGCGGCTCCACGGCCGTCCTCCGCTTTTCCGG
ACGCGACGGCCCTGCAGTGACGTTCGACGCCGCCGCTCCCCTCCGCGAACGAGTCATCCA
CTTCAGCGCTGCGGCAATTCGCGACCTGAAGGCGGCGGCCAACCGCTGCAGAAAGACCAA
CGAGGATGACGAGGTTAACGGCAAGCTCGAGCACGATCTGAAGGTCCAGGGGGGTGGCGG
ACAGATCTCCTCTTTCCAGTCGATGTGCGCGCATATGTGGAGGGCCGTGACGCGGGCGCG
GCTGCAGTTGACTGCCGATGCGACGACAACGTTCCGCATGGCGGTGAACTGCCGGCACCG
CCTGCGCCCGAAGATCTCCCCGGTCTACTTCGGCAACGCCATCCAGAGCGTGGCGACGAC
GGCGACGGTGGCCGAGCTGGCTTCGCACGACCTTGGGTGGGCGGCGGCCAGGCTGCACGC
GACCGTGGTGGCGCACGAGGACGGCGCCATCCGGCAGGCCGCGGCGGACTGGGAGGCGGC
GCCCCGGTGCTTCCCGCTGGGGAACCCCGACGGCGCGGCGCTCACCATGGGGAGCTCGCC
ACGGTTCCCGATGTACGACGGCAACGACTTCGGTTGGGGCAGGGCGGTGGCCGTGCGGAG
TGGCCGAGCAAACAAGTTCGACGGCAAGATGTCGGCGTTCCCCGGTCAAGCCGGGGATGG
CAGTGTGGACGTGGAGGTGTGCCTCGCCCCGGACACCATGGGCCGCCTCCTCTCCGACGA
CGAATTCCTGCAGTTCGTGTCACATGCACCTTGATGGGGTGCACCGCATCTGGCTGTCTT
GTATGTTGTCCTACGGTACCAGCGCATAGGATGTGACATGGCTACCACTGATCGGTGTGG
TCGCCGGACATGTCACATGTGTGTAACACATGTTGCTGCGCAGCAGATATGTACTGGATT
TGTATAATTGCAAGGTACTATCAAGAAAGCTCCTGGTCCTCTGTTATTTTTAAGTGAGAT
AAATCCTTAACTTGTTCCAAACGATCACTTTGGTTTCTAAACTTGTAAAATACATGAAAC
TAGTGCCGTAACTTGTCCGAACGTTTAAATACGGTGCCTCCGTCCGTATCAAGGCATACA
AACTGCCCACATGACGTGCCATCGTAGCGTTGGCCCACATGTAGGTAGCTGTGAGATGAA
TGTGATGGTTGTTTTAAAAAAAACTTTCTATATTAAAATAAATTTTGAAAAAGGCCCTCA
CATTTTTTTTAAATTTGCCAAACTGCATTGGTCCCACATGCCATGTCTGGGTCCCGCATG
TCAGCATGTGGGATGAAATATTAATAAGAAAAAAATGATGACAGAATTCGAACCTAGTAA
ATGGACGCACAATCTGCACAAATCTTATAACCACTACGACAAGAATAATTGTTCCGAGTA
GATATTAAAAAAAAATTAAGAAATTCTCGCGTTTGAAAAAGAGAGAGCTATTCAACATAT
TACCTGGCATAAACTTTAAAACTGCTAGTGCATTTAAAAAAATCAACCCGAAAAACTCTC
CCGTGTATTAACAAATTGTAAACGTGTTTCCAAAAAGTGTTTGTAATGCATTCCAAAAAT
TACAACATCTATTTCATGCAATGTTTAGCATGTTAAAATTTATTGTGTAAAATTATTATT
ATATTTCTACAAATATGTTTTAACGCATTTATATAATATATTGTTTGTACACAATAATTT
TTAGTACATGTTGAACAATGTTCATAATACAATGTTGTTGGTTTTTAATAATTATGTATT
CTAAAAATACAATTAAGATACACAATAATTGTGCGTGCTTGTAGTCCTGAATGAAGATAA
AAAAATATTAAACAATATTTTATAAAATACATTGAACTATTTAAATCCACATAACTCTTC
GAACTACACAATAATAAATATAGAAAAACGATCTAAATGGACAATAATCGCATATTGATA
ATTATTGTATTTATGTACGGGAAGATTTACATGTAATAGAAAACAAACAATAACTTAGAA
AAAAAAAGAATGGAAATTATAAAGTGATATGTTCACTACTCTTTCCGTCCCAAAATTCTT
GTCTTAGGTTTGTCTAGAAATGTATGTATCTAAATATGATTAGATACATTCATATCTAGA
CAAATCTAAGACAAGAATTTTGAGACGGACGGAGTATGTAAGTGTTATGACTGATTTACA
TTACAACTGGAGAAGGCCCAGTTAATAGAGCTGGCCCAGTTATCTTATAATATTAGAGGT
TTAACCCAGTTTATTATATTTGCTAGCCTAGAAATTATATATACTCATGTAAAGGACACC
TTTTGGAATTAAGCAATATCAATCTATTTTGTTCGGCTCCTTCTAGGAGACGGTGCCCTA
ACCCTAGCCGCCCCTACTCTCTCTCTCTCTCTCTCNNNNNCTCTCTCTCTCTCTCTCTCC
CGCGCCCCCGCGCCCTCCCCCCCCCCCCCCCCCCCCCTCCCCCTCCCCTCTCCCCTCCCC
CCTCCTCCCCCCTCCCCCTCTCCCCTCCCGCCTCTCCCCCCCCCTCC