morexGenes - Barley RNA-seq Database

Contig contig_244641
Source Contig contig_244641
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_244641 (5989 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_244641

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_34809	2	1807 bp	MLOC_34809.1	Available	Available	LOC_Os09g27030.2, FRAME:+3, EVALUE:0.0, 13109.m02621 protein oryzain gamma chain precursor, putative, expressed
CDS Structure of MLOC_34809

Contig Sequence (5989 bp)

>contig_244641 5989 assembly3_WGSMorex_rbca.fasta
GCTGGCATGACCACGGGGGCCGCGATGGCGTGGTCGAACTCAAGTCCCACCCTTTTTATG
TGCTGGCATGTGTGTCGGCCGGCTCGCGAGCTTCATCTTTTGGCATGATGCTGACATGAG
ACATTGCCGCTCGCATGACCGGTGACGGGCCTTTTCTTAAATGTTGATTGCGGACATAAA
ATGGGTCGACGAATTGGACGCACTGCGTACCTAAATCTAAAACAGGACGGAGGCCAGCCG
GACGGCCGACCCAAACAGACAAAAAACGAACAAATTCGCCGTCCGTTTAGATCGTCCGTT
GGACTTGCTCTAACTGCTCTTTTCTTAATGAAACATGTCTGATTTATAACGAATGGGTTT
CGATTTATATGAAAACCAGCTGGTTTGCATGAATTTAAACTACTGTTTGAAGAATTGTAT
ACATGTAACGTTAGATGGTTAGATTTCGCATCCGTATGTGGGAGACTGCGAATTGTACCT
TGTCAGTGGATAGATACAGGAGCAAATTTGAGGGTGTTGGAGATGCCCTTAGTACATAGC
CGCACATGTGTGCCACGCCTGGTATTTTGGCTCTTGAATATTGAGACAAAGAATAATCCT
CGCTAGAGTAAGTAGATTATACTTACTGCAGATCACAAATATCCTCTGCGTACAGAGTCT
CAAACAAGTGGTCAAGCGTGCCCCGGTGCGCGCCCCGATATATAAAACCCCCGGCACCGG
GACGCGAGCTCCTCCCGCCCGCCTACCCAACCCAGTAAAATACTGCCACCTATCCGCCGG
CGAAACGAAATGGCCCACGCCCGCGTCCTCCTCCTGGCGCTCGCCGTCCTGGCCACGGCC
GCCGTCGCCGTCGCCTCCTCCTCCTCCTTCGCCGACTCCAACCCGATCCGGCCCGTCACC
GACCGCGCCGCCTCGACGCTCGAGTCCGCCGTCCTCGGCGCGCTCGGCCGCACCCGCCAC
GCCCTCCGCTTCGCGCGCTTCGCCGTCAGGTCCGTGCTACTGCTACGCACCCCCAATCCT
CCGCCCAGCCGTCGATTCTCCGTCTGTCCGGCCGCCGCCGTCCCTCATGGCAGCTGACGT
CCCGGCCGGTCCGTTCGATCCGCTTTCGCAGGTACGGCAAGAGCTACGAGAGCGCGGCGG
AGGTGCGGAGGCGGTTCCGGATCTTCTCCGAGAGCCTCGAGGAGGTGCGCTCCACCAACC
GGAAGGGCCTCCCCTACCGCCTCGGCATCAACCGTACGACCCCCGACCATCCTCTAATCC
CCGCCGCCCGCTTCCGGCCCCGCCGGGTCCTCCTCTAAACGCTCGTCGCTTTTGCTGTCG
TCCCGCAGGCTTCTCGGACATGAGCTGGGAGGAGTTCCAGGCGACCCGTCTCGGCGCGGC
GCAGACCTGCTCGGCGACGCTCGCCGGCAACCACCTCATGCGGGACGCCGCCGCGCTCCC
GGAGACCGTAAGTGCCAAGTTTTACTTACTACTCTCACCGCAGAACATCCCATCAATTAA
TTATGAACTGTTGGTAGCGTAGCTGCGTAGGAATGGTCCCTGTATTGTAACGTTAGTAAC
GGTTGCTGAGGACGAGCAGGGTCACATGGTCAGTTTCAGTCGATGTCAATCCTCCGTTCG
AAAGCCAGGATAAGTAATTTATTTGGGTTTCAAACCAGCTATCTGTCGAGCTTTCTGGTT
TGCCTGAATTGCTGCAGGATTTTGCTCGTCACTGTATTTTCCACGGTCCCGGCACATATT
GTAGTTAAAAGTTACTTCTATCGTATGTACACCAGCCAATGAAAGAGCAGGAAATGTTAA
TTTGCCAAGTAGCATGGTGGTAATTAAGGATTGCCGCACAACATTTCTTGCTATTTATAA
CTAGTATGGTTGTGCGAAGACGAGTGTATATATAGCATAGACTATATCCTGTTGTAGCCG
TTGACGCTTAATTTGCAAGTATTATGTCGCTTGATCCAGCAAGCAGCAGAGTTGGTGTAC
GTACCAATCGACTCCATTAATGTGGGGAGTAAGTGATGTTGTCATTGCTGCAGAAAGACT
GGAGGGAGGATGGGATCGTCAGCCCCGTCAAAAACCAGGCCCATTGCGGCTCCTGCTGGA
CGTTCAGGTAACTAATGAATTTCTGCAGTTTTTTTTTTCCCACACGTGCTCCTGTATCAG
TAATAACCAATGTGTGCCCAATACTGTGCCTGCTCATGGTGAAGCGTGCTCAAATCTGGT
GTTTTTCAACTTGACGTTCATACTATATGATATCCGACAGGAAGTAGAATGATCGATCCG
ATCCAGTTAATTGTCTGCGCCATAGAACAAAGAGACTTCAATTCAATCATCGCCCTCAAA
GTAATATGTGTGGACGCGCCTTTGAATCGTGCTGCTTCTAATAAAGTACTAGTATTAAAA
ACTGCATCTGATGGCCCAGGATGGGGACCGACAGATCAATCCATTGCCATAGTTGAAAAA
TGCTGGCTCTCAAGAGCGGTGGTTGAGTATACTTGAGATCTTTTTCATCAGACACAATCA
TGAATTATTTGGAAGTGTACAGCAATGGAGTTAAAATACTGCGCTCGTGTGACATGCGAG
CAAATAAATAAATAAATAAATAACTGAGCAACTAATATAATTATGTATAGTACATTGATT
TCATGGTCTTCTTTCAGTTGGTGTTTGGTGACCAGTCGCTATCTTGTGGGGCCTTTCATG
CCTCCTGTTCATTATTCCCACATCTAAATAGAAGTAATATATCTTTCAAATATCGTCAGG
CGAATGCAATTCCAAATGCACACAGGTTACAGTGCCATATGAAGCTAGTAACATAAGCAT
CAGTTGAAGAATTTGCTTCACAACTTTTGCAACAGTTTACGGTGAACATCCAAGGAACGT
TAAAAAAAGACTGTAAAATGCACCCAATTTTAAGCAATTATTCGATCAAGTGGCATACAG
ATAAATATAGATCACGATATTCAATGAGGTTACTTACCCTAATTACCCGAAAACTTTGTG
ATCACGGTAAAATTCAGTAGTTACATCACGAGTTCACTTTCAGTCTGAAGGCCTAGACTG
ACATGAAAACATAGATTTAGATTTGTATGTTATCATGTTATCTGAATTTGTGTGATTGGG
TACGATTTAAGCATTTTAATAATAAACTTACCATGTAACTTTTTCCCATTTTCTATACAA
AAGTATTCTCATTGGCATCTACTGTATTAAGTAATACTGAAGTAGCCTAGCTACAAGTAA
AATGACAGATACTGAAATCTTGCCCATGCCATGTTTAGGCTCTATATATATAAAAAATAT
GGTCATGCCATATTTTCAGCATTGCGCAGTTTTATGTGATTGTCAATCGAGAAGATAGCT
CATTTCCTAGAACATTTCCTCAAATAGAAAAAGAGTAAATGGGTTGTTCCACAAACAAAG
CAATTGAATTCATATACTTATTCTTGCAGCACTACTGGCGCACTTGAGGCAGCATATACT
CAGGCCACTGGAAAGAACATCTCTCTTTCTGAGCAACAGCTGGTTGACTGTGCTGGTGGG
TTCAATAACTTTGGATGCAACGGAGGCCTTCCATCCCAGGCGTTTGAGTACATCAAATAC
AATGGGGGGATCGACACTGAGGAGTCCTACCCTTACAAGGGTGTCAATGGCGTCTGCCAT
TACAAGGCTGAAAATGCTGCGGTTCAGGTTTTGGACTCAGTAAACATCACACTGGTAAGG
AAAAGGAACCCCTTCTAATTTCGGTTGATGTTAACTATTTAGATTCAGCTAACCTAAGTT
TTGGTTGATGCTTTTTTTTCTTGGTAAGAATGCCGAGGATGAACTGAAGAACGCCGTCGG
GTTGGTTCGCCCAGTGAGTGTGGCCTTTCAGGTGATTGACGGTTTCAGGCAGTACAAGAG
CGGAGTTTACACCAGCGACCATTGTGGCACTACCCCTGATGTGAGTACTACTAAACCGTA
GCCCATCAAAGTATCAAACCATGTACCAGTTTATCATCAGCTATTTAAGTTCAATCTTCA
GTTAATGTGCTTTCTTCTGTCTTGTATCTCTACACTGTTCTGCAATTTTGTTCTGAAAAT
GCAAGTTTTGCTGAAACTACTAGGACGTGAACCACGCCGTCTTGGCAGTCGGCTATGGTG
TGGAGAACGGCGTCCCGTATTGGCTCATCAAGAACTCGTGGGGCGCCGACTGGGGTGACA
ATGGTTACTTCAAGATGGAAATGGGCAAGAACATGTGTGGTGAGTACCATTCCGTGTGCA
CTTCCATCTTACGTTTGCTCTTCAGGACACAGCGCACTCATGAGGCGATACTGACTCGAC
CCTGTAAATGATGCAGCTATTGCTACCTGCGCCTCCTACCCTGTCGTGGCGGCATGAAGA
AGCGCCAAATCGGCGAGTACAGTCTCGATTCGCCAGACATGAATAAGGTGTTTTCAGCCC
GAACAAGAACCTGAAGATTGGGGTATACAGGAACTGAAACTTTGCTGTGAATACAAACCA
CAAGGACTACGGTTGCAGTGAGCCCCGTGCGTGTACTCTTCCTCTGTATGGTTGTATGGC
TATATATGTAGGTGATCCAGCAATTTATTAGGGTTTCTCATGTATGTCTACGACATTTTA
TTTCCGGGACAAATAAAATGGCCCATTCATAGTTCACCCAGGCATCATCTTACTGTCGAT
ATCAGCAGGAAACTGGGCGCCACACATGCATCCTGCTGTATACTTAGGCCTCATTCCGTT
TACATGATTTCGAAATCAAAGAATAGAAAAAAGTAAAGAATTAGGATGCCCTATCCACTT
CAGTCCTTGGGAATTTTTTCCACGAGGCCTCGCCTAATGGTGACAATCGTTAGGAATCAG
TCTAATATGGACACAATTCTATGAAATCTATTATCTCCAATTCTATGAAAACGAATGTCA
TGCATAGGATAAAACTAGGGTAAGAATCCTAATTTTTTTTTTTGCAAACCTAATGGCAAC
TCAATCGTGACTCGCTCTTCTTTTCTCCGTCCACGAAGCGTGAGTCTCTTCTTGGTCCTG
AACCAGCGCTGGTCTCCTCACAGGCTTGCAGCATTTTCACGTGGCTTCTTCCCCCTCCTC
TTCGGTGGGGGCTCGTGGCGCTTGCTATTGTAGATAAGCTCGTGCCGGAGCCCCAAATGA
AAATTACACAGGTTCGGAGGTTCCGTCCGTTTCAACACACTGCAAGTGTGTAATGATGTT
TGTTGTGTACCCACGAGCGACGTGTTGGAACTATTTTGAATGTATGCTTCAAAGCGATTT
TCTTATATTGCAAATGTTTTTTGCCATCTGTGTTTTCTTAGATAGGTTGCAGCGGGCATT
ATTACACATTCTAAACATTTTTATTGCAGCAAGTCGGATATGTAACACAAAAGGGCAGCG
CTAGGGATCAGACTACTGATCCCTTGCCTCCCATCAGACTAGTCCGGCGTTATTGGATTA
GAAGCATAATGTCCGTCCAATCTGTTAGCATGACCCACACCTAGTTTGTTAGATTGGCTC
ATTAATTGATTACTTCGTGTAACAGCTTCCGCTAAACACGTCCGACACCTTCGCTGACTT
TCTTTGCTTCCTTGACTGCGTCCTAGTACGTAACAAACTGGTTTTACTTGACCGCTAGTT
GAAATTGCTTTGCATAAATCACGTTAAATATCTTTATTTTCAGATTTTATTTTTGGTAAG
TTGTGGTTTAGTTTCGTCAAAAGTAACTACAAGAAAATAATTATTATTGGAGATGTATTT
TTGGGTAGCACAGCATACTAAGGTATCCTGGAAGCATTATTGTTTATCTATAGAAGCATC
CTTTTATGATAGAAAATATGTTTTGTATTGACTGAAGCATTATTTTTATGCAATGGAAGC
ATCTCCGTGAAAACATTCTTTCTATCCAAACTCTTCTATTTTCATACTAGCTTCTTTTGA
GGTGCTTCATTCAATGTTTTTCTTAGACAATATTTTTTGCTTCTCGTAC