| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_244512
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_34746 |
2 |
1141 bp |
MLOC_34746.1 |
Available |
Available |
LOC_Os06g06030.1, FRAME:+2, EVALUE:4e-153, 13106.m00604 protein peptidase, T1 family, putative, expressed |
| MLOC_34747 |
1 |
181 bp |
MLOC_34747.1 |
Available |
Available |
LOC_Os06g48330.1, FRAME:-1, EVALUE:3e-18, 13106.m05138 protein ATEXO70G1, putative, expressed |
CDS Structure of MLOC_34746
CDS Structure of MLOC_34747
Contig Sequence (6681 bp)
>contig_244512 6681 assembly3_WGSMorex_rbca.fasta
AGGGAGGGAGAGGAAGAGAAAGGGGCCGGCGGCACCGGCGGCGGCTGCGTTATTTTTGGT
TGCGCGAGCGAGGGACTGTTGGGCCGCCGGCCTCTAGTAGTACTGCAGTACCACCGAAAA
ATCCAGCGAATATCTCACGAAAAGATACTTCATTACTGTTCTAGTAAAAAAGATATTTTA
TTACTTTATCTCGAAAAAGAGATATTTTATTGAAAAACTCTTACCATCCATCGGTTGATC
CACACGATTTATCCGCCGCCCGACTCGTCCGTTGATCTTGCCTCGATCTGACGAACGAGA
TTGTGCCCGTACACAACAAAGCAACGACCTAGTCGTGAACCGTTTTCTGAAACTGGATCG
TTGTTTCAGGAAAACGGTCCTGAGGGCTCCTCATTTGTCCACGTCGCGACTCCGCCTCGG
CTCCGACGACCTCGCCCGCCGTCTGCCTGGTGTCGCGCAGCCCTCGTCGGAGCTGCAGTC
ATTGCCATGGTCGCCCCGATCTGCTCTACCTCGTCGTCGCCCTAAGGCCTCGCCGACGCC
CAGATCCGACAGGATCCGGCAGCCGCCCCACGGTCTCGTCTCTCGCCGCCGTCCGACCTC
CTTCACCGGCCTCGTCCCGGCCCCGCACACGAGCTCCCGCAGCTGCCATGGCCTCCTGCA
TGAGGTTTTCCTGGTCATCTCGTTTTTCAAGCCATAAATGTTCATTAATGTTCGATGCTT
GTGTTTTCGGAGCAAGCCGCGTTGCCGCTGTTAACAGAATAGGAGACATGTGAGAGCCTT
GGAGCGTGCTGGGATCGCATGCCCTGAATCCGCCCCACGGTTCCGTCGAGCGACCCGCGC
GGTAGGAGCGCCGCCGCATCCCAGCCAGCTCGTGGACCCGCCGCCGACCTGCTCGTGGAG
AAATGGAAGGGGTTCGTCTCCAGCAGAATTCGCAACTGAGTTTCTGAAACATGATCTTTG
TTGTAAAAGCTTTTTCCGCAACAATACCTATGTTGCATAAAGACAAAAAAAATCTGAAAC
TTGACCGTTGTTTCCGAATTAATAAGTTTAATTTTTTTTACAACAAAGCGATTGTTTCTG
TAACTCGACATTCGTTTCAGGATTTGTTGGATGCCCGGCCGAAGCCCATGCGTGCGCGGA
TCAAACGGATGCGCGCGTAGATTGGACGGTCGTTTAGGTGGCGAATGTTTACTAAACATC
TATCGGTGAATGAGTAGCAGCCCCCTATTTTATTACTACTCTGATAAACGCCAGAGTAGT
AAAATTCAGAGAGGAACGAAAAGCTCCAAATGTACAGTCCCGCCGGTTCTATAGGACACG
AATCTAGTCACCCCACCGGCCATTGATTTAAAAAGCATCTTCCATTTGAGCACCCTAGCC
CCGGGAGTGAATTTTGGAGGACCGGAGCATAGGAGGGTTTTATTTCAAAAGATTCAAAAT
AAATATTTTAAGTTTAAAAAACGAAAAAAATCTGTGAAATTTTGTTCAAAAATATTATTG
TTTGCAGATGCACAAAAAAGAACAAAATCCCGACCCAACAACAACAGAAATGGGGCCATT
TTTATGTTTTTGTTTTTTTATACACCACATATGAAAGTATATTGTTATGAATTTTTTCCT
CTAAGTGTCATATATGTATTTGTGTATGTACAAAAAAAATCGAATTTATTCCTGATGTGG
AAATATGTGTTTTTTAAAGTCCTCCATGGAGGACGGGCTCCATTTGCCTTTTTCGCCCTA
GGCCCAGGCTATCCAGCAGCAACACAAAACTCATATCCAAGATAGAACAGGCAAGCGAAT
TCAAATGAAACTTCAATGGAAACATCTATAACATTCGTCAGTCTACAACCACACGGCCAT
AACAGATGCGTAAGACGAACATCAGCAGGTCTCAGAGGAGAACACTAATGTCGAGGAGGA
GGCAAACAAGCCCCAAAGTCCAAGTTCACGGGATTTCGCACGACATGAATCAGGTTGACG
CGGAAGGGGCCTCGGCCATCTCTTGCTCGACGGGAGCCGCCTGGACCGGGTAGTAGTGGT
AGTGCAGCTCTCCGACATCATCTCCGGACAGCTTCTTCCATCCGTCAGGGCCAACGTAGT
ACACTGAAATTTAATCAAACAGGCAAGTAATGTCAGCCACAACGCGCAAGCTCAGGCGGG
AGCAGATGATCGAGAGGAGATCCATTGCTGTAAATTCTATGGAGCACACAAGTCCTGCTG
TCCTACAAGCCTATCAAGGATGGACCTGGGCTTCAGCACTACTTGCTCAATACTTCAGTG
GATCATGATTGCAACATAAACATATCAACCAAGGCAGTTTGGTTTAAAATTGTATAATAA
TGATAACAGTATGTTCAGATTATATTGACTTAAAGGTTGTTTGCTTTTATTAGTTATTAC
TGATGATTGGTTCATAACACAGCACAAGTAGACAGTTATACAGAACAGGGTAATGGACAA
GATTATAAAACTAGATATCAGGAAATATAATAAGAAGCAGAATGCATACCACTAACGCAG
CCGCCACTGGCTCCGTCACGGAACGTTGCATGATAAATAGCCCTCCGTGCTAACTCAGCA
GCTTCCTCAACTGACATGTTGAATTTGTAACTGAAATGTGAAGCGCAAACATAAGGCCAT
GTGACCTTCAAGATAATATTATGAGCTAGCGAAGGAAAATAGTGGAGGGGTCAAAAAACA
TACCCCTCATCCAAGATACCATAAGCATATAGAGAGCCAGAACCAACAGAGAACCGGCTT
CCCTTGAGCCTTGCACCCTCACTATCAACATAGTACAAGCCCGGACCCTAGATCAAGAGC
AGAACCGTTAAGAAATAAGCATATACCTACAAACAGGTTAAAGCGACTAAAATATGTCAA
CGGGCTACTCACAGTTTCATCAAATCCAGCAATCATTGTACCAATTGAAAGTCCCATCCC
GCGGTACGAATAAAGGATATTAGCCAACGTCTTTGAAGAACCAGCAATAGAGATCCTTCG
CTTGTTCGCAAGCTCATGGAGCCGGCACTGGAAGAAGAATCCATTGTTAGTCTTAATATG
CAAATATGAGATGCAAGTACACAAGCAGGCGTCATTTTTACCTTGACCCCCAAGTTTCTA
TGCCAAAATTGGCAATCAGCAGCACCTCCAGCCATGGTTCCCAGCATGTAGGGATTAATC
TCGATGATTTTTCTCACAGTTTGCGAAGCTGCAGGAAAAGAAACACACCGTCATGTAAAG
AAAAGAAAAACGATCTGAACAATGTTTAAGTGATAATCCTTGCACCAAGCAAAAGCTTCT
ACACCGATAAATTGTTCTTTCAGAAAGTCTTCTTGATGCTCACAAACATGCAAGGGCAAG
TTTACAGAAGGATGGAAAAAATAGTAAAATAACCTCATCAATTTATTGCCATTCTACAAG
CATCAGTATGCACAAATGTTGGACCTTTGAAATAAGAACACTTGAATTCAATGGTATTAG
CAAAAACTATTTTGCACACCGATTCACTAACTTTATCATGACTAGTTCCACTGGAGTACA
TCGCAGTCCCTACAGATAACTAGCACTTGTGCTCAACTAGTAATATCTCAACACTCATCA
GATAATTCAACGAATCAGCAGAGCCAAACACGGTCGCCGCAACTGTTGTGTGGTCATGGC
ACTGCACTTGGTGGCTCGACTGCTAGCAACGGAACAAGGGAAGGAGGAGGGGGGACTCAC
ATATGTAGCCGCCCATGCTGGCCCGGGAGTCGGCGGCGACGATGACGCCCTTGTCGAAGA
TGAAGGAGAGCGTGGTGGTCCCCTTCTTGTTGTTCACCATCGCCTTGGTCGCCTTCTGGA
ACCCGTCGAACTGCCACCGGAAAACAACAAACAGAGCCCGACGGGATCAGCGGCTGGCGG
ATCGGGGGGGAGGGAGAAGGGGATCGGGGGAGGGAGGGGCTCACGCACGTCGTCGCAGGT
GGGGAACTCGAGGGCGAGCTGGCCGGCGGCGTCGGCGGAGAAGAGGCCGGCGAAGTCGTC
GCCGCCGGCGGCGGCCGCGCCGAAGTGGTTCTCGAGGGCGGAGAGGTTGGGGATCATCGC
GTCGTCGGCGTGGGGGCTGAATCGGCGGAGGCGATGAAGTGAGCTTTTCCTCTGTTTCGA
CCCACGGACTTTTCCTCTTGTTCTCGGTCTGTCTCTTCCTTTCTTTCTTGCGGCCGAAGA
AGAAGAAGAGAGGAGGATTGGCGTGGGCTCGAGGGCCTGCTTGTAAAGGCATTTGGGCCG
GCCTGCGTGCGGGCCTGACGTCTCCGACAGTTTCGTCTAAAAGCTTCCACACGATTTGGG
GGGAGTAAGAGCGCTTTCAATGTCTCAAAACAAAACAAAAAACTTAGCGAGCGCTTCCTC
GGAAGCCTTTCAGCGATCGCTCCCGCGCGTCATCACTTGACGCGTTTCCAGCCACCGCCA
CGTGTCGCGTTCTGAATGTTCCCTTCGAATTTTATTTTTCTATTTTTTCACTCACGCGTT
TTTGCTTTTTTTGGGTGTTTAAAAAAAAAAATATGTGTTCTGATTTTTCACCGGTCTTTC
GCGCGAAAAAAATCAGGTTTTCCTTTTTTCTACGCGAAAAACTCATTTTCTGGTTTTTTT
TGCGAGAGGCACGGTTTTGCCTTCGCGAGAGGCACGGAAAAAAAACGTGTTTTCACTTTT
TTCGCGGAAGACACGGTTTTTGCTTTTACGAAAGGCACCATTTTGCCATTGCGAGAGGCA
CGATTTTGCCTTCGCGAGAGGCACGGGAAAAAACGTGTTTTCACTTTTTTTTGCGGGAGA
CATGGTTTTTGCTTTCACGAAAGGCACGATTTTACCATCGCGAGAGGCACGCCCGTGCCT
TTCAGAAAAGAAAAAAACGCGTTTTCTGTTTTTTAGAATGGCACGATTTTGCTTTCGTGA
AAGGCATAATTTTTCGTTCGGTTTTTTTCTTCCGGATTTTTTCATGAAAAAGAACTCATC
AAAACCTATGAACATGGTATCTCGATTTGAAGATCTTGACGTGAGAAAGCCAACAGTGAA
AACGGTTCAAGATTTGAACGCACGGTTTAGGAGATAAAAGGTTTTTGAAAATACGGATCT
ACGAAAAAAGGAAAAACTCTCAGGTTGCCACAAGTGACACGCATGCAGTGCGCTTCTTGT
CAGAACCTGTGAAGGTGAGAGTAATCGTTGAAAGGTGTATTTGCTAACTAGTGATTTTGA
ACGATTTAGGGAGCAACTAGTCAGAGAGTACTCTCTCACAAGCCTTTTAACGATCATTGT
CACGCGTCATTGTTTAGCACGTTTTTAACCATCATCACGTGTCGCGTTTTAAGCAAGAGG
CACGATGGCCTCTCGGAAAGGAAAAAAATACGTTTTTTGGATATAATTTTTTTGCGTAAC
ACACATTTTTGCTTTCATGAGACATGCCTTTCAAAAAGGAAAAAATAACACGTTTTATAT
TTTTTTGTGAGATGTACAGTTTTGCTTGCACGAGAGGCACGGTTTTGCCCTTGCGAGAAA
CACGGTCGTGCCTATCGGAAAGGAAAAATATGTGTTTTTTTTGTAAAAGACACAATTTTG
CTTCCGCAAGAGATGCGGTTTTACTTCTGCGAGAAGCACGGTTTTGATTTTGCGAGAGGC
ACAAAACAAAACGTATTTTTTTTATCGTGTGAGGCACGTTTTTTTGGTTCGGTATTTGTC
CTGAAATTTTTTATTAAAACCTATCAACATGGGATCTAGTTTTGAAGATCTCGATGTGAT
AACGTTTCGAGATTTGACCGCACGGTTTAAAAGATAAAACGTTTTAAAAATACGGATCTA
TGAAAAAATAAAAACTTTTAGGTTACAATAAATAACACGCATACATTACACGACGTATGG
CAACCTGAAAAGATAAGAGTAATTTTTTAAAGATGTACTCTTCAACTAGTGATTTCGGAC
AATTCAAGCTCGATTTGCTAAAAAAAGAAATGTCAATTTGGACTCGCGTTTGTTGAGATC
CAAGTCAGTCCACTTCGTCTTCTCTCCCTCTCTCCCTTCCCTAAAATTAAAAGACCATCC
CCACGAAACACTAAAGTTCAAAGACCGCCGGGTCTAGAGATAAATACGCTAGCAGTCAAT
AAAGTTGAGGCCGAAACACAATACGGTCATTGAACTTCAGAATACGTTTAATACGGTCAT
TGAATACGAGTTGCAATGATTATACGGTCACCGGTTCTCCGTAGAGCTTCGTATTTTGTC
CGTTGACCGGTCAAAATAGTCTTATGGTACCACCTGTCACTAGGCGCCCCCATTAGCGAC
GAGACGGTCAAGGGTGAGGCCGAGCTTCTGCACGACGGCGGCGAGGATCCGTGGCGGCGT
GCCTGGACTTGGACATATCGGGGTCGTCCTCCATGGCGAGCGGAGCAGAGTGCTCCGCGA
GGGAGTGCTCCGCGAGGAGGCGGCAGAACTCGGCCTCGAGACTATGAGGAGCCCGACGTC
GAGGCTGGCGGAGGTGACACCCTTGAGCCCGGAGAGCGCCCTGGCGAGGCCGGCCACGAA
GCAGGGGTCGGCGAGGCTTCGCTTGCCGATGTAGTCGACGATGTCGGAGAGCCAGTCGAT
GGCGAGGCTGCAGTTGTTGGCGAGGAAGCGGAGCGCCTCCTCGAGGCAGCCGACAAGGGC
GAGGTAGCCCGACAGGTCCTC
