Contig Data
morexGenes
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Map Locations of contig_244493 (6373 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_244493

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34735 1 1262 bp MLOC_34735.1 Available Available LOC_Os02g04100.1, FRAME:+2, EVALUE:4e-156, 13102.m00411 protein peptidase, T1 family, putative, expressed
MLOC_34736 1 531 bp MLOC_34736.1 Available Available LOC_Os02g04110.1, FRAME:+2, EVALUE:8e-11, 13102.m00412 protein expressed protein





CDS Structure of MLOC_34735






CDS Structure of MLOC_34736






Contig Sequence (6373 bp)

>contig_244493 6373 assembly3_WGSMorex_rbca.fasta
TATTCCTTCCAGAGTAGAGGTCGTCATCAAGCACGGTCTTCTCCAGCGCGGCCCAATGGG
CTCATCCAATATTGACTAACCGACCACCGGAGGACCCCAGAATCCTGGACTCCCTCAACC
GGTGCAACGAAACTTCTGAATGATATGCAACAAAACCACGCCACAGAGCAACTACAAAAA
AAATAAACTCAGTTATAAGGAGAAAATGAAGAGCCCACAATGAGAATTGATGAATTGATA
TGCATGATTTAAGGTAAAGAAGAGGTCCGCACCTATGCAATTGTCGATGTTGATTTCAAA
TATAATTATTTGGTGTATTGCTCATAAACGTAGTGTTGTTATACAAATTAATGGATGCAC
ATCTCTTATTAGTTTGGTTATAGTGGAAATGCCTGAAGATCCAATAGCTCCGTTTATATT
GGGTAGACCATTTTTAAAAACTATAAAATATGTTATTCATGTCCACGAGGGGAATATAAA
GTTTGACATTCCCTCATGAGATCCATTTGTGAGATACTTCCCCAACAAGAAGAAATAAAG
GCGAACTCCAACGAAGAAATCATCCTAAACACATGGAGCTCTGGAATGGGTGTACTCCTA
CCAAGGTAGAAGTGATCGTTATCTCGATCAAGTTAAATGAAGGTAACCAGAAATACTTCA
TGCGAGGGAACTCATGAGAATAAAAGGTTTGTTAAGTTTTCGTTCCTATTTTTGTTCAAG
TAAAGAGTGTTGGAAGTGATCCAAGAAAACAGGAAAAGAAGAGAGGTATTGTTACTCTCT
GTTATAATCTTGACGACATGCTACAACTTGGTTTGAGTCTTACAATATGTGTTGCAACTA
ACCCCTAGGTTCTTAAAAAATGATTTTCTTTTCATACTTTCAAAGAAGAGAAGATGGCGT
TTGTATGAGCACGTCAACTCGTACCACTCATTCGCACAAACATCGTCAAGTCCAAGAAGA
CAACGGCTGATACGAGTATAATCGCTCATACCAATGCTTGTATCATAGGAGGAGTTGGTC
CAACAAAATTACTAGAGCAGAAAATGGCGAGGAGTACGAGCACTCGTACCATCTTTCGAT
ACAACAAGAATAACTTATCATAAGTAAAGGTGGGATGTGATATATGCGCACCAGCTTGTA
CCCACACTCGTATCAAACCTTCGACCGAGAGCCTTCGTTGGTGGTTCTGTTATCTTTTTT
CTTACTTTATTTTATTCCCCTTTTTAATTTTTTAAACACATGACGAAAAAAAATAATACA
TGGTGAACAATTCTTTAAACATGTCAAATATTTTTCAACCCACGGTGAACATTTTTTAAA
CACATGAACATTACTTGAATACTATATATATATGATGAACTATTTTTTAATACACGGCGA
ACATTTCCTCTAAACGCAGTGGACATTAATTTTTTAATACACAGCGAACGTAAAAAATCA
AACACCCACTCCCCGTGTCAGTGCTAGAAAACATCCATTCCAGCATCAATTAATATGGGC
TTTAAAAAGGCAAATAGAAAAATCGAAGAGAAAAAAAAGGAAACCAGCTTAAGTGTGCTT
GAAAGAGTAGGCCAGCCCATTTATGCCTTTCCTCAGGCGTGGCCTTGCTTCTCTTATATT
TTCTAATCGATACGGGCCGTTTCTTCAAGCCGGCTTAATAGTCTTCCTCAAAAAACAAAA
CAACGGCCCAAATCACGTAGCACCCATAAGGCGGGCCGATCCCTCCCTGACGAGCCGGCC
CCGCACGAACCCCTCCACCATCTCCTCCTCCCCTTACCCCTAAAAAAAAAAAAATCTACT
CCTCTTCCCGTCTCGATCTCTTGCACAACAAGAAGAGACCGCCGCACCCCCACAAAAGAG
GAAGAGGAACCACAGCTCTCGCCGCCCCGAACCCTACGAGCAGCTCCGACGATGTTCCGC
AACCAGTACGACACCGATGTCACCACCTGGAGCCCGCAGGGGCGGCTGTTCCAGGTGGAG
TACGCCATGGAGGCGGTGAAGCAGGGCTCGGCCTGCGTCGGCCTCCGCTCCGCCACCCAC
GCCGTCCTCGCCGCCGCCAACAAGTCCGCCAACGAGCTCTCCTCCCACCAGCGCAAGGTC
TTCCGCGTCGCCGACCACGCCGGGGTCGCGCTCGCGGGCCTCACCGCCGACGGCCGCGTC
CTCTCCCGCTTCCTCCGCAACGAGTGCATCAACCACGCTTTCGTCTACGACGCGCCCCTC
CCCGTCTCCAGGCTCGCGCTCCGCCTCGCCGACAAGGCGCAGGTCCGTCCCCGTCTCCCG
CCCCGATCCCCTTTTCGTTTTTTCCTGCCCCGATCTGCTCGCCCGCTTAGGGTTTCGTGC
CGGAGGGATCAGATCTGGTGCGGGGGATGTGTGGTTCCGTCCGTGGTGGGGCAATCCCGG
CTGCGATCTATGCTGCTAACTAGGGTTTTCATGGCCAAATCGCGGGGAGCACGATCTAGC
GGTACGAATGGTTAGGATTTTTACGATTTCGCTAGTTGTACGGGTCAGGACCCACCCTAC
AGTTTAGTTTAGGTATGTGGAGTGATGTTGCTTGTTTTCTTATATGCCGAGTTCTAGGCT
TGTGCAGTAACTGAGGATTTTAGCTGTATCAGAGTTTCCCTCGCAGCTTATAACTGTTAT
ATACAAAGCCTGAATCTGTAGGTCTGGAGTTGTCCCCATTGAGCTGTCTCTGGGGATTTA
GTACGGTAAACACTGTCTTATGTGTACTAGGTGTAACCGCGCTAGGATATTATGGCATGG
ATAAGTTGCTCCACTGAATGAGCATGTTATGTCATCTGTAAACAAAATGTCATCCGAAAA
TTTGGGATGAAGAAACTTGAACCAAGAGCTCTTAATTCGAGGGAACCACAATTATAGGAT
GCTAATAGTACATGTAAACATTGATGTTGTACAACTAGTTTAGTTGATCAACACCAACCA
CAAACCACAGCTGCAGATCAATCCTGTGATGCTGCAACCTGTCCACAAAGGTGCAGACCC
TTTCTGTTGCCGGGGGGGCACTCAGCCTGTCTGTACGCACCCCTCTAGCTCCTTTAAGGT
TTGCCCATGTTTCCTGTGATCACCAAATCCAAATCTCTGTCGCTTATTTGTCTGCAGCTA
GAGTTTGTGGTTTGTTTTCTGTCAATTTTGTTTTACTTTTCCTGTTTACCATGTTCGGTA
CACTCATCCTCACAAAAGAAGAATGCATGGTACCTTCAGTTTGTTATTACGTCCTACATG
TCTTCGTTTTTTCTTATCTTGTCTTGCTAGCGAAGCCTATAACAAATATTATAGTAATGT
TTTGATTGGGATGCATGTTATCTATCATTACATGGCCATGCGTAACAACATTTTATAGAG
GAAGAAGGTTTCCTTTACAAAATGTGCTTTACCTTTTGAGTAATTAACAACATGCTTTAA
GATCACTCTGCGTGAAATTTCTTCTAAGAAGTGGAAATGCTATCATTGCCAAATGATGGA
ACATACCTAGTGTGTGGCTGGTTAGAGCTTATCACAAAATATCAACTATAAACCAACACA
TGTTCTAGCGTTCCATGTCACCTATGCAAACAACATATCCAATCCTCTATAGTCCACTTC
CAATTAACAGGGACCTCAATTCCATGGTGCACATTTTAGTGATTAGAGTTGTCGATCAAA
TCTTAAACTCTACCTGTACGTGATTGGTCTTGTAGCAATTTTGCTCACTCCCAGTCAAGC
ATGCCCAGTTGAGTCTGCTCTTCAATCTTTCAGGGTGACTGCCATCATGCTGATTTCTGA
ACTTTGCATTGCATCTATTCCCGAGTGCAAAAATAAAATTCAAGATTTCCTGTACTAATT
CAGCGAGAGAGGCAAGACTGAGACCGGGGAGGGAGGGACTTCTCAAAGTCATTCAGTTAC
TGGTTTAATTTCGTGATTCTAGTCTAGTATTAGCAATGAAATCATTGCTCTCAAGCAGCA
TGTGTAAGAATATTTTTGTCTGAAAATCAACATGTTTTCACCACTATCCATTTATCTTCA
CATCTTGTGGTTGCCTGGTGGGTAATGTATTGACAATCTACTTCAACGTTGCAGGTTTGC
ACACAGCGTTCATGGAAGAGGCCCTATGGGGTCGGCCTCCTTGTTGCTGGTCTAGATGAG
TCTGGAGCCCATCTCTACTACAACTGCCCCAGTGGGAACTACTTTGAGTACCAGGCATTC
GCCATTGGCTCCCGCTCTCAGGCAGCCAAGACTTACCTCGAACGCAGATTCGAGAAATTC
AACGCCTACACCCCGGACGAGCTCATCAAGGACGCTCTCTCAGCCATAAAGGAGACCCTC
CAAGGTGAGAAGCTGACGAGCTCTAACTGCACCATTGCCATTGTCGGCAGAAGGGAGGAT
GGCACCGTTGAGCCTTTCTCCATGATCGACTCCAAGAGGATCCAGGAGATCATCGACTCC
ATGGAGGCTGCTGACGAGGCGCCAGCGGCCGATGCTCCGGCTGAATCAAGCTCGATGCAG
GAGGACAGGGGCGATGCTCCCCCAGCTGCGGATGCCCCTGCAGCGGACGAGCCCGCAGCA
CCAGATGCCCCGGCACCGATGGACATCTAGGCGTCGTCTCGTCTGATCGATACGTGTCAT
GTCTGTCCCACCCCCTTGTCCCAACACCATTCAGAGTTTCCAAAAAGACTAGACTGTTGT
TTTAGAAAGGTTGCCATCATTGTGTGTACTCTTTGCTTCTGTGCCACTACAGCTTTGTGG
TGCCTGCGTCTGGACAGATTGATTTTTATCTATCATGTGATGATGTCGCGGACAGAATCG
TTTGGTTGGAGCGAACATATTAACGTTTTATCATAAAAATGCTGGTACCTTTTGGAGTGT
TTACTGCGTGTTTTCTGGACACTTCGGAATTGAACGAACAGAGACCAGGTGCGATGACAA
TTTCCGCAATGAAAATGAAAAACAATCTATCAATAGCAAAGTTCTTAGTTGGGACGTGTA
TGTGTGCCTGTGACTATTTGCACATTGGGTCGTCGAATATTATGGGATGGAGGGAGTAAC
TATCGCTGCACATCGGCAATGGATAGTACAGTGGGATTTGCGTCCTTGCGACGGCTAGAT
ACAGCAGATTACCTGTGCAAGCCGTGCGGGTTCTCGTCGAATCCCTAGTACCAGTATGAT
TGTTGAAATTTTTGTCAAGAGCCAGAGATGCTGCTAGCCATCATCCGCTGTGTGATGGAG
CGTTGCATCACCAGGCCATTAAAGTCCAAGCCCGATGCTTGACTACATAACCTGGTAGCT
TGAGGGTCCTAGTGATTTAACTGTCGACATTTGGGGGAGAATTTGCGAGCCCCAATTGTA
GATGCTCGTAGGATTTTGCAAATGCGATGAGGCAAATCTTTTGTAGCAAGCAGGTGGGTG
CGGCGTTTCTGCATTCAGGCTCAGCTGCATCCATCGATGAACAACAAAATAAAAATAAAT
AGCAAACCAATTCAAAAATATCTAGTTCTTTTACACATGAAAGTTGAGAGAATCTTCTAG
GTGTGCGTCAGATTTCAAGATGTTTAGACATTTGAGGAGCTTGAGGCAGAAATAACAAAT
ATGGCTTGTCAAAGAAACTTCCGAAAAAGTGTGCCGCGTAGACCGGATTTTGTTTGTTTT
GACACAAGCTTCTCAAATGTCCAAACACCCTGAAATTGTTCATGCTCCTAAAAGACTCTC
TCAGCTTTCTTCTGTAAAAGATTAAGATAGTTTTGCTATTTTCTTTCAAACTTACTGTTT
ACCTAAAGCAGATAAAGCCTAGGCATCGTTTTGCATAGCAGGGTATTATCATCCCTCGGC
CGTATAATGAAGGAAGCACAGTGAGTACATCGGAGCGGCGAATTTACTGGCTACTGTACA
GTACGGACTTTGCAGGCACGGCCGTAGGCCGCGTGGCCCATGTGCGCCATCACTCCTCGG
CCAGCCCATTTACGATGACATGCGAGCCCCGTCACTGTTATGTAACTGTGAGCGCAAGCG
CGTGCCATTAAAATTAAAATCGTCGGCCGGCTCGTGCTGTCTCCCCCCATCGCCACTGAC
GCGGAGCCGCAGCGGAACAGCCATGGCGATGGCGGCCTGCTCCGTCCGCCTCCTCGCCGC
CGCCGCGCACCGCCGGGGCGCCGCCGCGTTCCTCCACGCCCCGCGGCGGCCCGTCGCGTG
CTCCCTCTCGTTCCCGCGCGGCCACGGCGGCATCCGCGGCCGCGCCGCCCTCTCCTCCAT
CTCCCTCCCCTCCTCCGCGCAGGGCCACGCGCCCTTCGACCTCCTCCCGCCGGACTCCGA
GCCCTTCATCCAGTGGGACCCCCCGCCACCGCAGGACGCCTCCGCGGGCGGCGCGGGGGC
AGGGGGGGGGGGG