Contig Data
morexGenes
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Map Locations of contig_244478 (1727 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_244478

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34728 3 1212 bp MLOC_34728.1 Available Available LOC_Os02g03580.3, FRAME:+2, EVALUE:7e-52, 13102.m12352 protein transcription factor, putative, expressed





CDS Structure of MLOC_34728






Contig Sequence (1727 bp)

>contig_244478 1727 assembly3_WGSMorex_rbca.fasta
TGTTGATGTCTGCCTCGGCTTGAATATGGGATTTTTTCTGCTTTGTTGATTGACCATTCA
TAGTTCTTACATGTGTTTCTCTTCTTGATATTATTAAAAAGGTCTCTCCAATATTATTTA
CTTAGTGATAAATAATTCTGTAAGAGGAAGAAAGGGGTGAAAGTTAGGCAGGTGGCGGTT
TGCATTAACTGTAAAATCATGTTTATAATATGTAGGCATGTGCTTTTGTATGTAGACCTA
AAAATATGAACCTGTTAATTGCAGCACATGGTGCCACCTTACGGGACACCACCACCCCCC
TATATGATGTATCCACCAGGAACAGTATATGCTCACCCGACTACTCCTGTATGAACTTTT
GTACCTGACAAGTGTAATCTACAAAGCTATCTTCCTATTCGCACACCATATGTATCCAAT
TTTACTGACATGCTCGTACGAATCAATAACTACTTGTGCAGGGTGTGCATCCATTTCATT
ATCCTATGCAAACAAATGGAAATCTTGAACCTGCTGTAAGTAATAATCTCTCTGTTTCTT
CTTTTTCTTCTGAGTGTCACTAGTTCATGCAAATTTCGACATGTCTTTCAGGGAGCTCAG
GGAGCTGCACCAGGTGCTGCAGAAACAAATGGTAAGTCTGTCCAAGATCAGTGTTAAGGT
TATTTCAAGCTTGGGAATCAGGTTTAAATCTCTGTTCATAATTTCAGGGAAAAATGAGCC
TGGCAAAACATCTGGTCCATCTGCCAATGGGGTTACGTCCAACAGGTTTTTATTAGCAAT
GTGTGGTAATTGCAAGTTTCTTTAGTTCCAAAACAACTAATTATAGGGTACCTTCAACCT
GCAGTGAAAGCGGAAGTGATAGTGAGAGTGAAGGAAGTGATGCCAATTCTCAAAATGTGA
GTTTGATATTACTTTGCACATCATATCTTTTATTTGGTTTAAGTTTCAACTTTCTCTTGA
CTCGTGGACTAATTTTGTTGCAACAGGATTCACATTCAAAGGAGAATGATGTAAATGAAA
ATGGTAGGCATTTGAGGGTTGTTTATAGTTTTATGATAGATTAAGTGGACTTGCACATTT
CTTTGCATAAGATGGAGGGTACATTGGGTGATGCAGGCAGTGCTCAGAATGGCGTATCTC
ATTCATCATCGCATGGAACATTTAATAAACCCATGCCGTTGGTTCCAGTACAATCAGGTG
CAGTGATAGGAGGAGTTGCTGGTCCTGCGACAAACTTGAACATAGGGATGGACTACTGGG
GTGCAACTGGCTCTTCACCTGTTCCTGCAATACGCGGCAAAGTACCGTCTGGTTCAGCTC
GGGGAGAGCAATGGGTAAAGTCCTTGGCACATGCTCTGTCTCGCCTTACTGCCTGCACAA
ACGTTAGACTAGGATCTTACCTTTGAAGACTAGGATCTGTCCTGCTATGTTACAAGAATG
CTTCTCTCTGAGAAGGGAGTTAGGCCTACTAGTCTGCTATGTAATTGTTGCTGGCTGTGT
AGTGCTTGACCATACATTTGCGTTACTAGAGTCCACTGAACCAAAGTTGCTGCAACTGTG
CTGCTTATACTTTAGTTCTTAGGCATACATTATGTTGCTGCCACCCACTGAGCCACACCT
TTGACGGCATTTTGTTTCATTTCCGATCTACGGCTAAAATTTTCCGTATGTTATTTGGAG
ATAGCTCTTCATTTTTCAATATGAAACCAGTTTGATGTGTTCTGTTA