Contig Data
morexGenes
Links



Map Locations of contig_244431 (6012 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_244431

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34709 1 1681 bp MLOC_34709.1 Available Available LOC_Os11g08380.1, FRAME:+1, EVALUE:3e-152, 13111.m00882 protein 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed





CDS Structure of MLOC_34709






Contig Sequence (6012 bp)

>contig_244431 6012 assembly3_WGSMorex_rbca.fasta
TCCCATGCAACGTTCCCCAAGAGAGAGGTCATTTAAAGTTCGTACCATGCAGGCTTAATA
GTGTATGCTCGCAACCAATTGTCCCATTTTCTTCCCGCACAGGCGTGGTTGGACCTTATG
CGGGCAACCAAACGGATCCTAATTCTACTATTGGCCTGTCATCCAAACCGGTTGTACATC
ACCCGTGCGACCGTCTTCCAATGGTTGCACCAAATAGCCATATGATCCTTGGCTTCCGCT
TGACTGAGTAAGGACCACATATGGATTCAAGACATGGCTCTGTATATGACGTGTAAAACA
ATTATGAGAGGTTGCATGTTAAATATCATATTTTTTCTGCAGTTCCATATCGCCCATGGT
AATGCACATACCGTATCCGAATATGTCCTGCAATACTCGACTCCACTCCATTTAGCCATG
GTCCAAATAATGTGCTCATACAAGACATATGGTTAACATTAAAGGCCACTTGAAGCGTAC
ATCATAGAAGTTTGGCTAGCAGACATTTGAGAAAGAGGTGTTTTATAGTCTCATCTTGAT
GAAAAAAGCAACATTGCTTACTACCATCCCATCTTTGCTTGGCTAAGTTATCCTTTGTAA
GAATCACTTCCTTGTGAATGAACCACATGAATTTCTTGATTCTCAAAGGGACTTTAATCT
TCCAAACGTGACTTGATTTTGGAATTGGACTAGAATTTATTAGATCTAGATACATAGACC
TGACGGAAAATATCCCATTGGTTGACAATTTCCAGTGGATCATGTGTGGCTCATGAGAGG
TGAACATCCCTCAACCTCCGCGCAAAATGTAATCAACTATCCCATCGGTCTCCTACAAGA
GACCTTCTGAACTGGATATTCCACTAGACAATATGTAATATTGTAGCCACATAAACTTCC
TTATGTCGCAAAATCTTTTATGGAGAAGGATATTGTGTGGCGAGTGGAGTCTCGCCTAGC
CAAGTATCCTCCTAGAATTTAGTCGTGTTACCGTTCCCAATGATAAATTTGGTTGTGTGA
AAGAAGACAACTCTCGTTCTCATTAGCCCCTTCCATAAATGAGAATCATTAGGTCTGACA
ATAACCTGGGCTAGAGTTTTCGAATGTAGGTACTTATTCTGTAAAATTTGCATCCACATA
CCTTCAGTCTCAACAGACAACCTATACAACCACTTGTTGAGCAGGCATCTATTCTTGACC
TCTAAGTTTTCAATCTCTAGCCCACCCTGGTCCTTCGGTATACAAATAATATCTCATTTC
GAAAGCATGTATTTTGTCTTGTTTTCATCACATTGCTAGAAAAATCGCGACTGATAGAAG
TCTAATATTTTCCGTACCCCTACACACACTTCAAAGAAAGATAGTAGAAACGTTGGCATG
CTTATCAACAGTGAGTTGATTGGAACAAGCCTTCCACCATAAGACAGAAGCTTACCCTTC
TAGTAGTATAGTTTTTTGAGATCGATCTTCAATGCATTTCCACTCTTTATTAGATAACTT
CGATGGTGAATTGGTATACCTAAATATGTAAATGGTAGGGATCCCAATTCACACACAAAC
AAATGTCTCTAGGAATCTTGTTCTTCTTTGGCTTTCCCAAAACAGAAGAGCTCAGTTTTG
TTGAATTGATCTTCAATCCCAACAACTACTCGAAGAGACAGAGGAGTAGCTTCATATTCC
TAGCCTTTGTCATATCGTGTTCCATGAAAAAAATCGTGCCATATGTGTATTGTAATATAG
ATACACCATCATCCACTAGATATGTTACTAACCCACCTACTTGACTGTCACCTTTGACCC
TGCCAATAAGGATTGCCAACATATCTACCATTATGTTGAACAAAATAGGGGGCATCGGGT
CACCTTGTCTTAGGGCCATTTAAGTCCGAAATAATGACACGTGTCGTCATTCATCTTAGT
ACCAAAACTACCCTTTTACATAAAGGATTCAACCTGTTTCCTTCAGAAATGGACAAATTC
ATTTGCATAAATTTAGTGTCCCTTTAGCTGTTGTCTTTAATTAGCTTCAACCCCCAAAAC
CTTGGCACAAGAGTCACTTGTACTTACATCATATTCGTAGATCAGCTACAAGGCCTACAT
ATTTGGCAGTTGAGAACGACAAAATGAAGTAACAAAATCAGTCAAAATAAAGTTTCCACG
AGCTAGAGGTGCTACACATCGCTCTATAATTGAGGTGCAGCACCTGCAGCTGCAGCTGCA
GTTGCAGACATGATGAATGGGCTATCATCTGACTCTCCCCCTACATTGACCCTGCGACAC
ATTTCTTTAATCCCAAGACCCCGAACTCGCCATCGAACACCTAATGATGTTATAAAAATA
ACTCGCATTGCAAGAACCAAAGTAAACACCGGCCAGAATGATACGATGCCTCTGCCTTGC
AAACCAATTCAAACCCCCCCTTAATTGGGGTTCCCACACAGAAGAATATTGTGGCGAATA
AACTAACCTTTGACACCTAACTTGCTGCAGTTATAAAAGGGGGCTTGGCCTCACAGCTTC
GACACCATCTCCCTTCTTCTTCTTCTTCTTCCACCTTCCAAGTTCCAGAGCCATTGTTGG
TAGCTACCTACTTAATCGACACACCTGACCTGAGACGTGCAATGGCGATCCCTGTCATCG
ACTTCTCCAGGCTTGACGGCGACGAGAGGGCGGCTGCTCTGGCGGAGATCGCCGCCGGGT
TCGAGGAGTGGGGTTTCTTCCAGGTAAGCATGCCATACTCTACGTTCAACAATGGATGCC
AATGTTCCATGATACTCATGAGAGGATCTTGTGCTGCAGCTGGTGAACACTGGCATCCCT
GACGAGCTGCTGGAGAGGGTGAAGAAGGTGTGCAACGACTGCTACAAGCTGCGCGAGGAG
GGGTTCAACGGGTCCAACCCCGCGGTCAAGGCTCTGGCGGCCCTGGTGGAACAGGAAGGC
GAGGGCCTCGCCCCAAGGAAGGTCCAAGGCATGGATTGGGAGGATGTCTTCACCCTCCAT
GACAACCTTCCATGGCCCTCCATCCCTCCAACCTTCAAGTAAGCGAGGGACAGATGGCCA
GATACCCGGTTTTCTTGTGTTGGTGACGTTTGTTGATCGTCCTCGCACTCTGCAGGGAGA
CGATGATGGAGTACAGGACGGAGCTGAAGAAGCTGGCGGAGAAGATGCTGGGCGTCATGG
AGGAGCTTCTTGGGCTAGAGGAAGGGCAAATCACCAAGGTCTTCTCCAAGGACGGCGACT
TTGAGCCTTTCTACGGCACCAAGGTGAGCCACTACCCGCCGTGCCCGCGCCCGGAGATGG
TGGACGGGCTGCGCGCCCACACCGACGCCGGCGGCCTCATCCTGCTCTTCCAGGACGACC
GTGTCGGCGGGCTGCAGGTGCTCGGCCGCGATGGCCGCTGGGCCGACGTCCAGCCCGTGG
AGAACGCCATCGTCATCAACACCGGCGACCAGATCGAGGTATGTGGAGTAGCAGCAGCAG
TATTGTAGTATCATGCATTCATGCTGGTCTTGGTGGACTTGTGGAGCTCACGTTAATTAA
CCTGCACTTAATTAATCATCTTGCTTTGTGATCTGGACAAGTTCATAAAGAAATGAGCAG
TCAACCCCAACAAACCACCACAAAATTTTTGGGTTCTGAATTGAGAATATCTTTCAAATT
ACTTACGGCAATCAACTTGATCATTCATAGGTGATGAGCAATGGCCGGTACAAGAGCGCG
TGGCACCGCGTCCTGGCCACCCGCGACGGCAATCGTCGCTCCATTGCCTCCTTCTACAAC
CCGGCGCGCGCTGCCACCATCGCGCCGGCGATCCCGGCCGCCGCCGACTCCGGCCCTGGC
GGCGACTACCCGAGCTTCTCCTTCGGGGACTACATGGAGGTGTACATCAAGCAGAAGTTT
CAGGACAAGGAGCCCAGGTTCGCTGCAGCGGCGGCGATAAAAAATATGGTGGACTGATCA
GCCCGAGCGACCAGCCAAAAATGGCTGCACCTGCAAAGCTTAAGCTACTTCTTCAATCTT
CCTCCTCTTGCTCTCTTAATTAAGTTACTCGGTTAAGTGTGAAATTACAATACGGATTGG
TACGATAAATAGGTTGCTAAAGTACAGATGTATCGGTGCCGCTCGGCAGTCTCACAGCCA
TACATGCAAATATATGGTGGCATATGAGACTGTCAGAATGTGCTGTGGTCAGGAGATTCC
AGAGTGATTTGTATCTTGGAATGGCATCTCGCTATGGGTTTCAAATCTTTTCTTCTGTTC
GGATGTGAGGTTTGTTCGTGTGGTTTGTAAATGTACATTAGTGGGAGATGGTGAGGACTG
TGGAAAGGTCCTGTGAATGGGATATATATTAATGGGTTGCTTACAATACAGTGTTAGGTT
TCAGTCTGGAGTATGGACCAATATATGTTGCCCGATGCAGTACAAGTTTCATGGACTTTC
AGAGTATTTATAAATTATCTTTGACTGACAAAAATTGCACTGTGAAAAATATTTATATAA
AAAACTAATAGCACAATTAGTGCCTGAAGATAAAAAAATTGACTACCCTAATGGAACACT
TGGGCACTCGTAGATCACTGCTCTGCTTCTTGTTAGGCCGGACCGCGTTATCCAATGCGA
GTGTAGCAGTCGGCTGCCACAGCAAGCCCACAAGAGCATCTCTAGTAGATATATCGCGCC
CCGCAGAAGTCCTTTACAATTCTTCTTCATGCACACATCCTTCCACTAGTTGGATCAACA
TCTTTTCCGTACATTAATTGTTGATCCACGGATTCTTGATGTTACATTCTTCATTCTTCG
GCTTTGATTCTAAAGAATTAGACGTGGCTTTTCCTCTAATTTTTTTCTAATTGCACATAC
AGCCGCATCATTAGCCTCTATGATACTAAGGAATGCACGAATATCTATTAAGTTTCTTTC
TATCAGTAAATCGATGTATTCTTCTTTCTCGATACCAAAATGAGCATACACCTTCCCACA
TACATGAACATCTCAATAAGTTACCGGAATTGAACCAAATAAGTTGACAAAGCCGAACGG
AAACAAGAATATACCCCGTCGTTATTTCATTTAAAGAATACCCATCCGAGGTGTTACCGC
ATGCTAGATGTTAGCCGCAAACTGTCTCTGTGCAGTCCTCGCACTATAAGAGCGGCATCG
GCGAGCCGGCGAGCCGCTACGCGAGCATCGAGCCCGAGCGACGGCGGACCGAGTCCTTGA
CGGCAAACCGAGGACGGCGACTTGACGGCAAACCGAGGATAGCGGTGATGGCACTTTGTC
GGGGCTGTGCAGGGTGCTCTCTGACCAATCCATGGCTTCGCGCAGCCACTAGTGACCGAA
AATGCCAGATCCGATACGCACGACAAACAGTCGCCGATCTGTAACTTTTCGGTCGGCCGA
GGCAGCAGGAAGGGGTAGAGGTCAATCTCGGACATGTGGCGGCCCATCGACGTGATCCCG
GCGGCTGGTATGACCGGAATCGTAGGCGGCAACCAGGCGGCGTTGGGTAGGGAAAAGCGC
GGGCTGAAAGGTCCAACCTACCAACCACTCCCGCTATATACAGGGCATCAACTAGGCGAG
GGGGAGAACCTGCGTTTTCGCGGGTTGGGGTGGGAATTTTGCCGCGCCCTGCAAAAATAT
TTACGGGTCCGACGCGTTTGAGGGGTCTGATTGGGCAACTTTTTTCGCGCGGACCCATAT
TTTGGCAATTATTTTACGGGTCGGGGCATTATACGGGGTTTGCTAGAGATGCTCTTAGCG
AAGTAAATTTGGCATTTTACTCCATTAAATTTGACCTAACCGATCCTCAAAACGGCTTAG
TGGAGTAAAAAATTTACTCCATCCCAAAAAATCAAAGTATATTTACTCCATACATACGTG
ATGTCTACTACGCAACCTTCTCCTTGTAGGCATTGTTGGGCCTCCAAGTGCAAAGGGTTG
TAGGATAGTAGCAATTTTNNNNNNNNNNGGTGACCTAAGGTTTATAAATCCACGAGAGGC
GTAGGATGAAGA