| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_244340
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_34662 |
1 |
2105 bp |
MLOC_34662.1 |
Available |
Available |
LOC_Os08g37432.1, FRAME:+3, EVALUE:0.0, 13108.m03939 protein MATE efflux family protein, putative, expressed |
| MLOC_34663 |
2 |
1184 bp |
MLOC_34663.1 |
Available |
Available |
LOC_Os01g22500.1, FRAME:+2, EVALUE:6e-88, 13101.m02386 protein craniofacial development protein 1, putative, expressed |
CDS Structure of MLOC_34662
CDS Structure of MLOC_34663
Contig Sequence (9450 bp)
>contig_244340 9450 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGGCGTTAGAAAAGATTAGCCTTCTCCTGAGAGCGGCTAAGGTT
CGTTGCGGTTTCTCTGACTGGCACGTACTCTCTGGCCGGCCGGGCGGATGGGTGTGGCAA
AGCACCGTGGCCCATGGTTGGTTGGTGCGTGTGCGTGGATGACACCGGCTCGATCGCGCG
CTATGGACCGCGTACTCCTTACTAGGACGTGCTGGCCGTCCACATAAAATGTCATGTATA
TATACTCGCCGTCGCAAAGTTCCGTCGGTATACGCCTGCTACCGTATGTATGTATGGCAG
TGCCAGGCGCGCAGCGCAGGTGTCGCCAGCTCCACATAAATGAGGTAATTAAGCACGCGC
GGGGCGGGTATATACTCGCCACCCGATCGATTCCACCGCAAGCACACACGCAGAAGGCAG
AAGCAGACCACCTGCAGACCAGGAAGAGGCCGGAGGAGCGAGCTCGCCTCGCCGGCAGAG
GCCAGAGCTGCGCGGTGCGGAGCCATGAGAGGGGACGACGGGGGGGAGGAGGAGGAGGCG
GCGGCGGCGGCGCCGCTGCTGGTGCCGGTGCCGCAGCAGGGGAAGGGGGGCGAGGGCGGC
CGGGTGGCGCGGGAGTGGTGGGAGGAGTCGAAGCGGCTGTGGCGGATCGTGGGGCCGGCC
ATCTTCCAGCGGGTGGCGCTGTACGGGATCAACGTCGTCTCGCAGGCCTTCATCGGCCAC
ATCGGCGACCTCGAGCTCGCCGCCTTCTCCATCGCCTCCACCGTCATCGCCGGCTTCAAC
TTCGGCTTCCTGGTAACCATAAGCATTCATCCATCCATATGCGTCTCCTTGCTTGCTCGT
CGACGCATGTCTTGATTGAATTTGGAGCATATAATTAGATCAGATCTTAATTAGTACTTA
CTAGATTAGAGGCATATGTACAACAGGGTCGTTCCAAAAAGACAGGGGACAGGATCGACT
AGGCTAAGCCAGGAATGCGTGACGGCATTTGGTTGGTTACCAAATTGGTTTGTAACTTTG
AACCAGACGACAGTCGACGTACCTTGCACTTGCAGTGCGGCGTGTAAACTAGTGCAGGCT
GGTCAACGATAACGCCGAAAACGCGCGTATCCTATCGAAAATCAACACGCCCCAGCTCGT
GCCAATCTTCTGGATACATGGCTTTCAGTACATGCATACATGTCGACCACTACTCCTCCT
CCATCTCCGGCCATTTTCCCAGACGCGCGGGGCACGTGGTTGTTACTTAGGCCGACGACT
GCGGACTGACGAACAGGGGTGCAGCCGTGCAGCAGCATCGCCGATTCGCCGCCAGCAGCT
TTCAGATCTTCATTTCGACCGACGAACAGGAGCGATACTGTTCTTTGAGGGAGACGGACG
GCGCATGCGGCCTTCGTCCTTCACGATTGCATATATTCTGGTGTCGCATTTCAATTCATT
TTGTGTGGGCTGTAGTAGCTGTCTGCCGACACGGACGGCCAGGAGTTGTCATCCGGATTT
CTTCACACAGAAAACTCGTCGTCGTCGTCGTCGACTGTGCACCGCGGCGTAAAGCTGCAT
ACTAGCTACCCAACTTACACAATACAGAAACATGCCGACCACCATCCCGTTTTCCTGCTC
GCGCGCGGCGCGGGGATCATGCATATATGTGTGGTTGCTGCCGATACAGCTACAGCTACA
GCCACCGTAGGAGTAGCTTTCAGATTTCAATCTCGTAATTAACCCGGTCTTTGCTATTTT
AAGGGAAGGAATCGTAGTAGGGGATTCGATTTCGATATTCAGCGTCGCTTTCTGTAGCTG
TCTGCGGTAACATTCAGAGATATGTTGCTCTTTTGCAAGCCAGAGGAAGATGAGCCGTGC
GTGTCCTAGTTGAGTTGAGCACATGTTTGTCGGAACGAATAAATGCACTGATCGGCGCCC
CGATCGGCGGCCGCTAGCTGCCGCGGTACGTACACTGTATCCTGCGCAGGTGTTGTGTCC
ACGCCCTGACACCAATCAGGCGTACTGGGTCGTGGTCACCGTCTGCACCTGTTGGTCCAG
TTGGTCATGGCTCACGGCATCACATAGCCATCTCGTACCATCAACACGAGTAGGACTGTT
TAATTTCTTCGTCACAGTGAAAATGTTTGGTAAAAAGAAGAGAAAATCTTCATGGCTCAG
GCTATATATATGGTGGAAAACTGATGTGATGTAATGCATGATGTTCATCAATGGCCGTGG
TCGTGAACTTCCTTGTGTTTCTGGTGGTGACAAGCGCAGCTGGGCATGGCGAGCGCGCTG
GAGACGCTGTGCGGGCAGGCGTTCGGGGCCAAGAAGCACCACATGCTGGGCGTCTACCTG
CAGCGGTCATGGATCGTGCTCTTCCTCTTCGCGCTGGCGCTGACGCCGACATACGTCTTC
ACGGAGGACCTGCTGCTGCTCCTCGGCCAGGCGCCGGAGCTGTCCCGCCTCGCCGGCAAG
ATGAGCGTGTGGCTCATCCCGCAGCACTTCGCCATGGCCATGCTGCTCCCGCTCACCCGC
TTCCTGCAGAGCCAGCTCAAGAACTGGGTCACCGCCGCCACCGCGGGGGTCACGCTCGCG
CTCCACGTCCTCGTCACCTACCTCCTCGTCACCCGCTTCCAGCTCGGCTACGCCGGCGTG
GTCGTCGCCGCCGACGTCGCGTGGTGGGTCGTCGTGCTGGGGCAGTTCTTGTACGTCGTC
TGCGGCGGCTGCCCGCTCTCGTGGAGGGGCTTCTCCGTGGAGGCCTTCGCCGACTTCTGG
GACTTCATCAAGCTCTCCACCGCATCCGGCGTCATGCTCTGGTGCGTCCCTCCCTCCCTC
CGTCCATTAGTTTCTTCCGTTCATTGTTATATATACGGTTACTTATACCAGCACTAGCAC
TAATTGGTTGGAGTACAACAAACAAACAAGTGTATATGGGAATTAATTCTTTCTGGCTCC
TTGACATCTCTTTGCTACTTTTCAGCCTGGAGAACTGGTACTACAAAGTGCTTGTGTTGC
TTACGGGGTACTTGCCAAACGCTGAGATCGCCGTGGACGCCCTCTCCATATGGTATGCGC
GCGGTAGTACAAAACTTCCCCTTTCCAATCCTCGCTTCTTAAAGTGCTCCACAACAATAT
GCGTTCATTTATTGTCGGCTGAAACGTATATATGCAGCTTGACGATCAACGGATGGGAGA
TGATGATTCCCATAGGGTTCCTGGCGGCCACTGGGTACGTTAACGCCAACCGAATTCACA
CGACTAGCGCCGCATTGTGTGTCATTTGGCCCGAGTAATTAACAGACGGCGAATTCGATC
TGCCGAAAATGCAGCGTGCGGGTGGCAAACGAGCTCGGCGCGGGCAGCGGCAAGGGGGCG
CGCTTCTCCATTGTCGTCTCCATCACCACCTCCGTGGTGATCGGGCTCGTCTTCTGGTGC
CTCATCCTCACCTACAACGACCAGATCGCGCTCCTCTTCTCGTCGGGGAAGGCCGTGCTC
GACGCCGTGCACAATCTCTCCATGCTGCTAGCATTCACCATCCTCCTCAACAGCGTGCAG
CCCGTACTCTCTGGTACATACATACATACATTTCCTTCTATATATATAGCTCGAGAAATG
CCACTGAAGCTCTACTACACGCTTGTGTTGTATTCTCCTGTAACTGTGGGCGGTTGCATT
GCATTGCAGGGGTGGCTATTGGTTCTGGATGGCAAGCATTGGTCGCCTATGTCAACATCG
GATCCTACTACCTGGTCGGGGTGCCGATCGGGGTCATACTGGGCTGGCCACTCGGATTCG
GAGTTCGGGTAGGGAATTGATGGATCATCACAAGGATGGAGAAACAAAAAAAATGAGAAG
AAGAAGAAGAAAGTTTGCATCTTCTGATCGTTCATGGCTAAATTCTGCAGGGAATTTGGT
CTGGGTTGATTGGCGGGACCGCTGTTCAGACGCTGGTGTTGGTCTATCTCACCATGAGAT
GTGATTGGGACGATGAGGTACGTGAGAGCTCCATCATCTTTTCTGCTCTCTTTCTCTCTC
TCTATATATATATATATATATTTATGTCTGTCTGATTTATCTTGTCATGGAATTCAAGTC
TATTAGGTATCTTCTTTTCTGTTATCAGTGTGAACAATCTTTTCCTTGTTCGGGTCTTTT
AGCTCATTGCTTGTGTGATTGCAGGCCAAGACCACCAGTGCACGGATGAGAAAATGGGCC
AGCACAAAATGAGAGCTACTCGACAATATTCTTGTCAACTTTCAGCTCCCTTTGACATAG
GGGAAAAGGAGCTCGGCAGCAGGAGGTTCAGAAGTAAAAACGTTCAGAATATGGGGAGGA
AGTAGTTGAGAAGAAAATGCGGGCGTGTGTTTCGCTAGGGAGCAAGCATGCCGGCGGCCT
GTTTCTCAAGATATCCGTTGGTCACGAAAATTCAGTGTGGTATCAGAGAGCTCAAAACCA
TGTATTTCTACGATATCTAAAACCATATGTAGTACGAAGAGAAAAGGAGGAATGTGGTAT
AAATTCAAATTCCACCAAGACGAAAGCAAAACATCGAGACGTTGATTTGATGGACCTTGC
TTTATTAGTATATATAATCCTTAGATGTTCGTAATTGCACCTGTCACTCATGACCTGTTT
TCTGCATGATTCACCTGATCAGATCATAACCGCTAGATTTTCGTAACTGTGCGCAAACAA
ATCACATCGAAGAAACAATTAATATGCAATTTTATCCAACATTTTTGCAATTCTCGGACA
GACGACAATTAGTGAAATCCCTGTCAACTTCTCCACCAGAAATGTGCAGACCCAAAAAAT
ATTAGTGTTAGTTTGTTTGCCGTACTCACGTCTCTCTCTCTCTCTCTGCGTATCTCCATT
GCTATGTGAATACAAGCCACCATCACTTTGTGCTTCTGTACGGTCACCAGCAGAAGTTAC
ATTTGATGAAAAAAGTTACTCCGTCTGCTCATTACTCTTAGGTTTCTATAGCAAGCGCCA
AACATGCATATTTTTAGTGGAAAGATCATCAAAACAAGATTGCAGGCCATCTTGCCAGTA
ACGTGCTGGTTTTCGCAGCAACTGTGGATGAAATTCTGAAGAAATATAACTATGAAGATA
TCACGCAAGTAAATTTCTTTTTGATTTACTAGAAAGGGTGGGTAGATCGAGAGATGAAGC
TAGGAAGATTCACTAACCCTTGGTCCTGATGCAGTTTCAGAAACGTTACCAACCCTAGCA
TGTAAGAAAAAAAAAGGATTGAGAAATCCATTCGCATCTTCTTCATTAGCGCTCGATTTT
ATTTTTGATTTTTGCGGGACATCACTCACATTGACCAGCTGATTGTATATAATATTAAGA
GGACAAGGCATCGACGAAATAATGTCTTTACCATTATCTCAAAAGAATCTCTACCAAGTA
CTCCAACAGAAGGTAAAAGTGCTGCCAGCATGATAGCAATTTTCATCAAAGCCCTTAGGC
ATCATCGTCCTGCATACTCTCGCTCTTCCGCTTCGCCATCAATGACAACCGGGCGTCTCT
CTCGAGCTCATACTCTCTGTAATCGGCTCTCTTCAAGAACGACTGCCGATCAAGGTACTG
GTTCGAGCTCTTCTTGTATGCCCCCAGCTCCTCCTCCACGCCCTTCTCTACCTTATACTC
TCCCCAGTCTTTCTTCGTCTTGTCCAGGACACTCAGCTTCTGCTTCTTCCTTATCTGCTC
CAGGATATTGTCCACAGCAGACGGTGCAGCACCCACTGCACTGGCCTTCTCAACCGCTTC
CTTTGAATCCGCATCTACGAGTTTCTTGATTTCAATATCCTTGCCAGCAAAGTCCCGTAC
CTCGGTTATCTATTGGATCATACAAAAAAACTAGAATATTAGAAACATCATGTGGAATCA
GATGCAGAAATCATACAAAGTGTCACAAGTTTGTCATCTGTATCCACAATTATCAGGGTC
GTTCCAAACTTGTTGCCTGTTAAACTTAAGCTACTCTACAGGAATGGACACGGAAAAGCA
AATAAGAATGTAAGAAGCAACGGCAGTGACGGTACAAATTTTTAGATGGAAGCTTCACTT
GGACTTAATAATATAAATAATTATGTGATGATGACAGTACAGCTTTACCTCCACTTTCCC
TCTTCCAGATGCAGCAGTGGCGGCATCTTTAACAGCTGCAAGAGCATTTGCCGCAAGTTT
TTTGGTATCCTCGCTTGTTTTCTGTTGTGTCTGTTGTTGCTCATTTTTTGGGACTTGATC
ATTTGCAGAAACCTTTTTTGGTGGAAGGCCCAGAATGGTCATCCAATTATTCTACAGGAT
TTAAGAAAAGAACTGTTAAAAAATAAGCCTACCATAAATAGAAATATAAAACATAACAGT
TTGAGCATCAGCTTGCCATATGGTTAATACCAGAAAGATACTCACATTTGTCGCCTTGGT
TTTCTTTTCTTTTGCTGCCGTTTTGAGCTTAACCATTGCAGGTTTGGGCATCTTCGCAGG
CAAACCACTGTTCATTTTCTTCCACATATCCTCCACACGAGATTTTTTGTCTGCCAAAAA
ATGAAGCTTCACGCCATGTGCTTATCTCTACAAAAGCATTTGTAGAATAAAAACAACAAA
AATATGCATAAGGAACAAACAGGCATGAGATGCTACACTGCTGTCAAAAGTTCAACACGG
GCCATGCATCTGAGAATATCGTAAGTCCAGTTCTCAGAAATAGAAACAGGTGGCCTACAC
AAGTTCATGTTCACTTCAGGACAAACAATATTTAAAAAAAAAAAAAGTTCATGTTCACTT
TCTTCTATTTCTCCTTGACTGGTATTTTGCTATCCATGCCTACTTGTCATTAACAAATTA
AGGGACCAGTTATTAACATGATGTCCCAGAATGTGTGCGTTCAAACTTGTCTAACTTTGG
ATGATGTTATATTGAAACTTATTTAGTCTGGTCATGTGGGCCAGTTCTTTTGGCAGCTTA
AAAAATAAGCCACCACCTCCCAAGCTTTTCCCAGAAGTCGCCTCTCTTATTCACTGGAGC
TTCTAAACTAGTTATGGGACAACTAATTTAGAAGTCTCAACAAATTTTGGAGGCGGATTA
TGTTTTAAGCTGGAGAGAGGCAGCTTATCTTTTAAGCCACCTATTAGAACTGGCCCTAAT
ATTCATGGAAAATATTCCATAATATCACAAATTCATACAATTTTACTAGCATAGTCACAT
GAGAACTAATGCTAAAGCTGCATATCAGATACCATGTCCATGTCACAAATGGAGGGAGTA
AAAGATGAGGAAAATTCAAAGGCAGCCAAATGGCTAACGGTTACTGTTAGAATTGAATCG
CTCAACTCCTGGTACAAATGTTAGAACTGAATCACTCAGCTCTAACCCCCCCACCCCGTA
CTCACACATACACATGATACACACACATGTGCTCTTTGTATTTTATTTATGCTTTAGAGG
CAACATCCTGCCACAAGCTTAGTACTTTTTAAACACATACACAGGGCCTCAATATATAGG
CTGCCCAAACCGACCCAGCTACAAACAAACTCAAGCAATGGATATCTGGCAGCATTGGTT
AACAGCTAAGCCACTCTGATTGATGTCTGGAGAAACACCAACTTTATTTTGCAATTCAGA
GAAGAGAAAATCAAGCATGGAGATGAATTAATAGTACAGACCAGTATCGTGAGGCTGCTG
CTCTGAGTTGTTAGCATCTCCCGAAGCTGGCAGTGTTTCATCTGCATCCATAGCCTTGGA
CCCTGGCATTGACATAAACAATATGAGAATTACTCGAGTGACTGTTAATTGGAAAAGAAG
GCCCACGCTAACAACAATGTTTGGGGTTTGATTAGGCTTCAGTTGCACTATCTGGCAGCT
GCTGAATGCTGAGTATTTCAACAGAAGTTTTACATTTTATGATAAATCTTTGCAGAATGA
TTTCTGAGTAAACAGAAAAGAGTCACAGAAGATTTGGAGCTCAATAGTTGTAGCAAAAGG
AAATGAAATATCTGAGGAGTAAACAAAAAAGAAATAATACTAAGAAGACGCACACTTGCA
CACTCCTCTGTCCTAAAATGGAGTCATCACGAGCTCACTCCACTGCTATAGAAGAAGATC
ACAACAAGGAGAGAAGAACAAATTCACAGATTTTTCAGCTACCCAGTTCCCATAATTTCC
TGACTTGATGAACAACAGTTAATGTTTGGCTCCATCTTTCTGGAACATTTCAAAAAGAAT
TAAAAAATTCTTCTGGCATATGAACATGGATGCAGACACGTTGAGATTTTTGGATTACAA
CACATATAATCTGTGATTCATTCACCTCACACAATGTATAAAGAACAAACTGGAGTAGTA
GTTCACATGAAAATACTTATTCTCTGTATCGAGTTACTACTGATAATGTGTACGGGGCTG
TTTGGATTACGCCCAAGATTGCCACGCCAAATCGGGGCGAGCGAATATTTTGGTGCAGGA
ATCGGCCGCCCTCGTTTCGCCCTCGCGTGGGCGTGAATCTGAACTACTTGACCAAAATAT
TGGCAAGGAATCGGAACCTGGGCTTTGATCCAAACACTATCATATCCAATCAGTCAATGC
CAAAATCAAGCAACACGATCCATATAATTATAACATCATTAGCACTTGACGATATCTACA
GAGCAAGAGGTACAGAACCACCTTCCACTTTCAATACAGATGCGCTATGAAATTAAGAAT
GCAAACAACACATGACCATGCACACAGTTCCACCATTTGTACAGACACATTAATTGAATC
ACATCAAACTTTTCTTCGAAGAGAACAGACCAAGAACTGACACACAGTCATTGCATCACG
AACATACATGAACTGGAACTTGGTTCTCGGATGACCCCCCCCCCCTTCTTAATTTATTCC
TGTATTTCAAGCATTCTTGCATACAAGGGGTCACATCAAAGACAGGAACTTCATCTACTA
ATCAGTAGGCGGTAGCTAGTGAGAGATGGTAAAAGATTTGTACCTGAAGGCTTCGAGTCT
TCTTGCGGGAAATGGCAGGCAATCGAATTGGTAAGGAAAAGCAAGAACCTGAAGATTGCA
AGAAGAGAAAATAAATGTATCAGCAAGAAATTCATCGAATCAGGGAAACCAGAGTCAAGC
CCTTATTGAACTCTTGGCAAAGGAACAAGAATGCAAGACTGAGAGCACACCTCGAAAGCA
GTTCTTGTTTGCTCAACCCGCTTCTTCAGGTTCCGCAATGGAGATTGAACATACACAGTG
GCAACTGCGCATTGGAGATTCAGTAAAAACAGATTCTGCACAAACAATCGGAGTAGCTGA
ATCAAGATAGACACAGGATTCATACCTTCAGGCTTCACTTATGGGCCTCTTCCAAGAATT
GGGAAGCGACCAAATTGGTGAGGAAAGGCAAGAACTCGCAGGCTGAAAGGAGAATGTGAA
GAACGGATTAGAAAGAACTTCATAGACTCT
