Contig Data
morexGenes
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Map Locations of contig_244319 (5165 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_244319

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34651 3 1210 bp MLOC_34651.2 Available Available LOC_Os02g18830.1, FRAME:-2, EVALUE:9e-147, 13102.m02111 protein ribosome biogenesis protein NEP1, putative, expressed





CDS Structure of MLOC_34651






Contig Sequence (5165 bp)

>contig_244319 5165 assembly3_WGSMorex_rbca.fasta
TTAGAGATTACATGTGGAGCGAAATAAATGAATCATTCTAAAACCTAAATCCCCCCCCCC
CCTTCGTTCCTAAATACCCCCTTCGTTACTACCCGGGAGTATAAGACATTTTAGAGATTT
TATTAGAGATTACATGCGGAGCGAAATAAATGAATCATTCTAAAATATGGCTATATACAT
TCGTATGTAGTTCATAATGAAATCTATAAAATATCTTATATTTAGGAACGGATGGGAGTA
CATGGCAGGCTACTTTAGGCTTTTCCAGGCAGCAACCAAACGAATCTCAGGCAACTTTCA
GGGATGCTTCAGGCCAGCTAAGAATAACGAGGACGCAAACCAAACTAGCCCTATATACAA
CTACATTGAGCAAATGCCTACTCGAACATAACACAATGCACATAAGGCTGGTCGTAATGG
AAGTATCATAAATAGTATCATGCATGCCAACTAGGCATATTTGATGATGTGACATGAAAT
TAAATGAAAAAAAAGAGGATTGAGTATCATATTATGATANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGTCATGCATGGCAATAAATGAACTGTTTTATGATACTAGCACATGATACT
ACGCATTACGGATGTAGTATCATATGTATGATACTAATATATGATACTCCCCATTACAAC
CAGGCTAATCAACAAGTCTCTGCCTGGATGAGCGGTGTCCGCAACAAAATCTTGGGGCTG
CCTAACCGCACGAGCCAAATTTTTAGAAGATTAAGCTGCAACTTGGAACCACAATGAAAT
TTTAAAATTACTAAATTTCATAGAATCTCGGTAGAAAAACAGTGATAGAAAAAGAATGCA
TTTTCTCAACACGCCTCTGGCTGCGCAGCAGCGAACCAAACACACGCCCACGAGATTTTG
GGCGTAAATGTGGCCCAGCTATGTTTAAACATCAGTTGAGGACGCTTCAAGCAAAGTAAA
TTTCACCAAAAATGACTTGACTGCAAGGACCATAAGCACTTGAAACATTCAATGTTAATA
CTTTTACAGCCACTGATTCATGTCTCCGACAAAACTAATACGGTAGACATATAAGACTTG
AAAAGGCACAACAAGACTATTAGAGCTAATGGGTACATAAAAATCTGATCACAAAGCTGT
AATATTCGTTTTCAATCTTCCCTTCACTGGATGCTCCATTTCTGCTCCAAGGCACTGCAT
ATTCGATTCAGGCAACAGGCAGCACTGAGAGGGTAACCGCTAACTGCAAGAATAAGGTAA
TATGTCACTACAGGTCAAAGTAAAAGGGGGTACAATCAAGAAACTAGATGGTGCGGCGAT
AATACAACTTGAGGCAGAGAATAGCAATATAGATCTAGGCGATACTTGTGAACTCAAACC
TAATTGATGGTTTCATGTTCATACAAAAGATGTCGGAAAGAGCTTGCCGCTGATGCTAAA
ACCACCAAGAATCAGAAGCGTATTTAATCCAAACCAGTAACTACTACTCCCTCTGACCCA
TAATATAAGTGTTTTTAACACTAGTGTAGTGTCAAAAACGCTCTTATATTATAGGACGGA
GGGAGTATAAGTTACAACAAAGGTATCCCAAGCCCAACTTATTCGAGGCAGTTAATTATC
GAAATAAAGGAAATCCAGGAATTGGATAGTTTCAGAAAATATGAAAGAGACTAAACCTCA
TTTAATAGTTAATACCAACAAGAATTTATCTAACACCCATTTGTAAACTCTCAAAAGATC
AAAATAACTGAAAAACATACTGATTTAACAAACATATATAGTATCACCCTTATCAGAAGT
TTAGGAAGTTCTCAGGACTAGAGTTCTTATTTCAAACAGGGTTACTTACTCTGTATGTAA
TCATCTGAGTATTCCTTGTCAACCTTTCCATGGGCCATGGCACCAACCTGGAATAATTAT
GTGCAGACAATATGAGATTATGCACAAGGAAGCAACAGATGATAGAAAACAAATTAGTAC
AAAATCAAAGCTTTTACAGTTCCACTCACCACAAACACAAGAGGTTCATCATCATTGGAC
TTAGCAACATAGTCACACAAATTAACTGCCTTCTCCGCACTATATGAAAGGCCTAATGAC
CAAAAACACATCAATTAGCATCCTTATCTGATCCAGATAGAAGTTCTACTAAATAGATAA
TTTTCTCACCAATCTTCCGTGTGCCAACAGGTAGATACTGGGTAACAGGATTTTTAATAA
CATTAAGGAGCTTCTCACGCTTCCCAACTGCCGTGATGCTCAGCTTTTGCAATAACTGTG
CTGTGATGTTGTATAACTTGCAGGTCAGCATGGTTCATGAAATATTAGCACTGTACCGAA
ATACTTATAGTTGGGGAAACTTGTACTAGTTTCCCCCAGCTACAAGTACTTCGGTACAGA
GGGAATAAATGACTTAAAAGGTGAAGAACATGCACTACTTCTATTATTTGGAACTTACAC
ATCAAACCACAGAAACGCTTGAACGTCCGTGGCATGCGAACATGAGGCTTGATTTCAAAC
AACACTCCCTTTTCAGTCCTAACATAAACAGCTTGTAACCTGCCAGCCTTAGTTAGGGGG
CTATCAAATATTGCTAGTAGTGCCTGCAAAAAATTTTGGGGCGAAATTCATAACTGTCAT
ACATTGTAGCTATTCAGATACCCAAACAGGGTTCAACAACCAAAAGAGAGGAAACAAATG
CTAGTATTCACGTTGACAAACAAATTAAGTTTGGTTCCCTTTGACTTACAACAGGAACTT
ATGGATGGATAATACTCCCTCTGTCCCAAAAATAAGTGACTCAACTTTGTACTAACTTTA
GTACAAAGATGAGTCACTTAATTTGGGACGGAGGGAGTATTACAGTACCCGAAAGAAAAT
AATAATGACGAAAATTTAGAATACCTGGTGGATGATATCAGGCCTATAATCAGCTGGATT
GCGATTCTGCTTCCTTAAATAATTAGCGTGATCATCCGAATTCAAGATTTGCATACCCTA
TAGAAACAGTTAAAAGAATCAGTAAAACTGACATAAAATAAGGGGCTTTTTGTTTAGGAC
GAGGTGTAGTCTCTTTAATCAGCAGATGTCTTGTAAGGAATATAGCTGCTCTGGTATAAT
TAGTTAACACTTGCTCTTTACTGCATCCTAGCAGGTAGCAGCCACTAATTTTCGACCATT
GCTACCTAAAGTAGCACATGAATAAACCAGCTATTCGAAGAAATTTATCTAAAGCTGAAT
TCGACCGCCAAAGGAGAAACAATCGGTCACAGTCAGAAATAAATCACTGATTTATTGGTC
CATAGTCCATAGAAGAAGCATACCTTGCCGACTTTGCCGACCTCGAGGCAGGCCCTCTCA
AGTACGAAGATAGCGCCCGGCCGCCGCTTACTGTCCAGCGGGCGGGGCACGATGGGGATC
CCATCCCCCACCTCCTCGGCAAAGGCCTCTGGCGCCGCCTCCCCCTCCGTCACCTCCTCA
TTTTCCTTGCCCTCTAGCTCCACCTCCTCGGCGTCGACCGGAGGGGCGCGCGAGGCTTCG
CCGCCTTCCAGCTTCCGCTTCTTCTTCCCCTTGACTGCGTACGGCCGCCCCATGTCTTCT
TCACGCTTCGCGACGGCTCGGGCTGCGGCCTGCGGGGCTTTGAGTCTAGGGTTTTTCTTC
TTCTTTTTTTTCGAGTGGGTGGGGGTTCCTCTTATTATGTGGGCTCAAAAGGGACTGAGC
AAAGCAATCGCACAACAACAAACAGAAGCCCATCAGCCACAACCAACCCAAACAGAGAGG
CCCATAAACCACAACCAGCCCAACAGAGAAAGTTTGGATTCGTCACGCCCGGCCCAAATC
CGAAGGGCTGACCATATGACACTGGAACGGACGGTGCCGACGCTCGCCGGAGGGGAGGTG
GGGGCGGCTGCGGCATCTCACAGCACGGTGTGCCGCCGCCCTGGAGCTTGGCAATGGTGT
TGGGATCATGGTGCGTCGGCCGGCCGGCCGGGCAGGTGCGGAGCAGTCGGCGGGTGTGAC
GGTCGGGCATAGCGCTAAGTCTGGCTGCATGCGTACGTAAGATAACCTTTTCTTGTAGTA
TCAAAATTGGACAGGACGTGATTGTCTCAAGCGCGACAAACTATGAGCCCCTATTTCTGA
ATTCATCGATTGTGTATTTATTTATTTTCACTCGGAACAAATGGTCCACTGCTAGGTTGG
AGCATGTACAGCCGGATTTGGCAAATTTGACTTTTTATATGAATGTGTTCATGAACAATG
TTAAAGGATCTTTTATATGGTTGTTGTACATCTATACATCTCAAATACAGAATCTCAAAT
TCATGAAATGCATGTGCATCGATTATACAACATGAATTGTCTGAATTCAACGGTTCGAAA
GAAAGCAAAATAAATCATAATTTAATAATTTGGACATGCAAAAACTAAGAAGCAATGTCC
GAGCGTGATGGATAGCTCACTGGCTGGCTGGATCATTTGCGGGACGACATCCATGCCTCC
TGCTCCCAGGTCATCCTTGTCTCCTGCTCTTAGGGAATCCTTGCGTCATGCCCCGTATGT
AGCTCATACATTTGTGATGCATGCTCCATCTGCATCCTTGTTACATGCTCCTCTACTATC
ACAGTCGCAGTCGTCGGCGTCGCCTCGTACTCCCTACGACGGTTGATTTCCTTCTTCTTC
TTTGTCTCATCCTGGTCCAGTGGCACAATCCTTGTCGGTGGATGAAAGAATGGGGTGCGG
GGTTCCGCGCGTGGCTGGGGGACAACTGCTCCTTCATGTCCTCTATTGATTCTTATGACG
CCACAGTCGCTTCCCTCTCTCTATCGACGGCGTCGGTTCGATCAGGTGATGTTCTTCGGC
TTGCACGACGAAGTCGAGGACGGGATGCCGATGGGCGAGGCGGACGCAGGCTTCGTCGCG
GCGGTCGGGGAGGGGTGTCGGCCAGCCGAGTGTCTCATGCCTGTTTGAAAAGCCCATCTG
AATCGCATTTTCATGACCGGACTGTTCGCTCGCACACTGACCGAGCGCACATTCATCTCT
ATGAACGAACGCACGCACTCACGCATACTTACCCTTATAAGAACCTCTGAATGACTGAGA
TGGCTGTTAGGGCATATTTCTCCCTAAGCGGTTTTAGTCATTGATGACAATGCATGTGCG
GACTA