Map Locations of contig_244257 (10015 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_244257

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34615 3 425 bp MLOC_34615.1 Available Available LOC_Os12g36210.1, FRAME:+2, EVALUE:9e-27, 13112.m03712 protein inhibitor I family protein, putative, expressed





CDS Structure of MLOC_34615






Contig Sequence (10015 bp)

>contig_244257 10015 assembly3_WGSMorex_rbca.fasta
AAACCCTACTGCTTTTCTTTCTGGTTTATTATTATAGATCGATGCTGCTTTGAGCTGGGC
CAAGGTCCAAGACTCTAATCCAAGGTTCCCGAGAGGTTCTTCTCAAATAAAAAAATTGTT
CCCGAGAGGTGTCTGTTAATAATAATAAAAAGTTGCCAAAAATACATAAATTTCATTGGA
GGATTTTTTTTCTAAGGTGAAGTATCTGGTAAAAATGGGCGCCCTGGGCAGTGCGGGCGG
CAGGGCTGTTGCACGGGCGGGGTGCCCGTTGGCGCGGCTCTGGTCGGCGGTGGGGTGGAG
CTGCTGCTCCTGTCCTGCCTGGCCGGTGGCGGCCCTGCTCGACCGGGTCGGCGTCTGGAG
AGGTTCTGTGGTCTGCCCTAGCGGGTGTGGTGTTGGTTGGGGCTGCTGGTTTCCTTGGGC
TTGTGACCTCTACGTGGTGTAGGTGGTTTCTCCCGGTGGTGAGTCCGGCGCTACTCCCTC
CCGGAGTCGCCTCGTTGGTGGATTGTGGCGGCGGTCAGACCTCACTTCTACGACCTAGGT
ACACGTGCATGCTTTCTAAACTGTGACAGAGGGAGTAAGTTTGGATCAATGGCATTGTAA
TATATTATGAGTCGCCGCTGATTTTGGTTCGTATGCTTAATTCACATTTTTGAATCAAAT
TTGTCTTTGTTTGCAACGAATTTGTGTTTTAGTCGTCTAAATTTAGGGTATCAGTTAAAA
ACTACAAAAACTTAGGAGTAGTAAATTTACTCCATCAAGGTTTACTCGGTTATTTACTCA
TCTATTTTGTAGAGGATGAACTAGAGATGCCAAGCCGCAGCTGCCGCCGGCAAGGGCCGC
ATTGGCGTCGGGCCCTGCGTCATAGATCCAGGGCGGGTGGTAGCTGCGGAATCCCTTGTG
AGCGCGGAGGGGGCGTCGCATGCGGGGAGGCCGGGGCAGCAGTCACGGCGGCGATTGATG
CCTCCATGGCTGGCTGTCACCTGAGATTGGATGGTGGCGGTCGCGGCGCTCCATTCAGCT
AGGGTGGCGACTGCGCGCATTAGGTGGCATCGAAGGCCGTGGATCTGGCGTCCTGCCCAG
ATTCGTCACTGTTTAACCTTAAACGGCCGATGGCGCGAGGAGGATCAGTGAGGGGCGGCT
GTAGCCCCCCTGTCGGCGTGCCGACGCCGGCCCTCGTCTACGCGGCGATGCCCCCTCAGT
TCCACCCAACTACGGAATTGGGGGGACGCGACTTCCGGTGAAAACCGCGCCGACTTCGGT
CATGGTAGACGATGGCGGCGTCTAGGACGTCATTACCGTCTCGAGGCATCGTTGTTGCCG
GTCGCGGCACCCCACTCGTGATGCTCCGGGGGAAATCGTAGATCTGGATCTACTGGATTG
GATGATGATGGCACCGTCGATGTCGTGTCCCTCCTGAGGACATCGTTTTGGAGCAAGTGC
TGGTTGCACAAGAGAAGGGGAGGAGCGGTATTACATCTACCGCATGCCCGACGATGGATC
CCGGTGGTTGGGCGCTGCAAAGGTTCGGCGATGGGCGTGTGTGGACGGATACGTGCAAGA
TGGTGGCGTTGTCTGATGCCATGGTTGCGTTCTCGCTTTGGAGATGGACTGGTGGAAGAT
GGTGGCGGCAACCTTTGAGAATGCGCCGGACTGGTGTGGGACTCAGTCCCGGTCTATGGC
TGGGCTGGGGCATTCTGTTATAGATATTAGAATTTAGTGTGATGTCTGTTTATTATTTGG
CCCAGATATTCGGCACATCTTCATCAAGGGATAGGATTAGCAACATGTGTTGTCTAGACG
GTGGTTTCAGGTTGATCGATGTATTACTTTGTATGGTCTTTATGGATAATTAATAAAATA
GCTGCATGCATCGTCCAAATGCAGAGGCCGGAGGCATATCCTCCCTTTGAAAGAAAAAAC
TAGAGATGCCCTTTGTTGAGGAGCACCGCAACATCCGAAAACGTCTACGGTTCATTGAGT
TCCTAGCTACAAGTGAGTTCCCTAGCAGCCGTACGTGTTATCAATCATGAAATCCGTTCA
CATTCATGCAATGTTTTATATGCAACATCAGTATACCGATCAAATTCAGAAGATTTGGTA
ATAAGCTTGAGCTCCATTCAGGCAGTGAGTCTGATCACAAATACACATATCCCATTTCGC
CTTGATACCACGTGTTATATTTTGCTTCACTAGAAATGTTTTGTGCTACCATCAATCAGA
TTCAGTCTAATAATATGGTCGCATGCATCATTGCTGATACAGAGCCCGGAGATCCTTCCT
TCTTTTCCAAAAAAAAAATCTATCAAATTCAGCTTTGGTGCTACTTTCTCAGATGCAGAG
CCCGGCCGGACATCTCAGCTGGCACCGGAGGCCCCGCAGGTGAGGAGTGGCAGAGGTCAT
GGCAGGAGGTGGTGGGGAAGTCCATCAAGGAGGTCAGGTATATCATTCTCAAGAAGAAGC
CCGACTCCAACATTGCAAGGTCGCTGGTGATCCCGCACACAGTTGCGGAAACACCCTTAA
GTGACTAGATCAAGCCTTTCAGGCGAAGCAACATATGCATGCATGCTCATGAATAAGTTT
CCGTTCATGGGTCAACAAATGCAGGCATAACGAGCATCAACATGGCATGGTTTGACGTAC
TTTTCATTTCCACTACTTATGTGTACGTTTGTGCTTTGGACTTTGGACTGCTTCCTCTTT
GACAGAGTACTAGGTTTCTATTAAGCATCTCATTATCCAGAAAATTAGTGCTACTCTATT
GTGTTTCTCAGCCCACACCCGTAGGCTACAATGGCTGCACCACGCCAGTCATCAGGAAGG
GAAGGGTTTGCCAGCCCACCAAGGGTTCCATGCGCAAAAAAGGTTTTTGTCTTTTTTTCT
CTTTGGTTTTCTGGCACTTTGCATATCCACCCAAAGAGCATCTCCTATCGTGCACAAAGC
CCAGCCACCCACACATCTGACCCTTCTCCCCTGGACCCCCTCGTCGTCGACCCATGGCAA
CATGGGGGGTGAAGAGACCTAGCGCCTCTACTTTCTCCTCCACTGTCTCGTAGACACCAG
AGGCGTCGGCCCAAGAAGATTGGTTGTCTCCGGGATGGCGGTGACATAGCGTCTTTCTAT
CTGGCGCGAGGCGGCGGTGTTGCTTCTCTTGCTCGCGCTGCGGAGGTTGTTGCAGCGGCG
ACGCAGGTTGTTGCAGCATGGCGCGAGACGGCGCACATCAGTGCCCGAGGCCATTGTGCG
TAGCTTCATTGTGTGCGCCTTTGGCCGTTGCATGGGGTGGAGGTCCCCCGCGTGGTCTGT
TGGATGCCTTGATCTGGCGATCGCGAGGCGGTTGCCGTGGTGGAGTGCACTCTTTTTATT
AGATCAAGCGCCTTTCATACCATGAAGGTCTTAACCCTTGAGGCACCACCCTTGTCCACC
AGGTGCTAAATGGTTGAAACTTACGATTTGTTTTTGATTTTCTCAGTCACACTTACCAAA
TTTCATAAATAAAATTTCAAGACACTTGCTTTGTTGATCTTAGACACAAAAATCAATATT
TTATTTGGTTGTCTTCACTAAGTTTTAAGAGTTGAAACTTAACATTTTTTTTAAATTCAT
CAGATTGTATTCAAAATTGATCTCATTTGAAGGCCCTCATCACGAGAACATGAATATGAA
AACATAATGTAATTTAAAATTTTCGTTCAAAAGATGTAAAAGTTTGAAAATCAAATGCGA
AAAATAAATGCACACGCAATGGACTCAGTGCCATGAGACATGTGTGCCACAAATCCACGT
CCACCTAGCTACATCCTTGTGAGTGCATTTTTGGGTCCCCATGGATATTAGTCTAGGTGT
CACGTGTGTATGGTGTGGAGATATGAGACATCTGGGTTTTACTCCTTATGTTTACCAATC
ACATTTCGGTTTCACTCTGACAATGCAAGTACAATAATAGGATGGAAATTAACAATATTT
TTTAGATAGAATACGGTCCAAGAAGAGAATGACTTTGAATTAACGGAGTCATCAAGTGGC
CTGGGATTACACAAGGCCAAAAAATACATGGAGCCGGTATTGCACCTTACAACACAACGC
ACAGAGCGAGTACAAGAAATATAATTGTAAGCACAGCTGGCCTATATGACTACTGTTGCC
AATATGTTGCTTTCTTGTTTATTTTCAGTTTTTCGTGACACTTTTGGTGCTTGCCTGTGT
GCATCTTCATTATGCAGAAGTCGGGTGTTACTCATCATGATTTGTATTCACTTGATGCTA
CATTTTAAGTTAATAAAGTGCCCTTTATTGAAAAAAGCTAACCTGGGTATCGCCCACCGC
TCTCAAGATCCTCAATACTACGCAGAACAGACAGTCAAAGATATCGCAAAATGCCAGGGA
GAACGCCGGCAAGCCGACTCCATCGGGATTGGATGACAAATATCCTTCCTTCTCTGTTGC
CGAAGAGTGACCCTACGCTCTCTCCCTAGCTCGTAGGACGCCTATGTTCTGCAAGAAGAG
GAGTCCTCCCAACATCTTGGCAATGATCTGACCTCGCAAAATACAGATGCTCACAACAAA
TGCTTCACCCGAGCCAAAATCACACCTTGTCAGTTGCAAGGTCGCCGCCGTCTGGAACCC
AAGCGAGGAGGGAAAGCCAACTTGGGCAGTTGAAGACACGAGAATCTACACTAGGGTCGA
GCCAATTCGACGAATGCGTAGAACACAGGGGAAGCCATCACAAAGGGGAACCTAGCATCC
AGAGTGAAGGATCCACAAGCAAACCCAACTAGCCAACGCAGGGGATCTGGGCGATGGTAC
CGACGAAGATGCGGACCCGGTTGGGCCTGAAGTCTTGAATCACCTATGAGCCAACTGGCA
CGACGATAAAGTCAGCGTCAGGCTTGTCCTTGAGGATGACCTCCTTGATGGTCAGACCGA
CCACCTCCAGCCAAGACATCTTCTTGCAGTCATCGACGACGACCTCCCAGGAGCTCATGG
TTGTTTCATTGGGTGAGATCGATCAACAACAATGCTATCTTAACAAAGGTATTTCAACAA
CAAAATGAGTAGATTAACGGTGGCAGGTATGGTAGTACTAACCGAGCCATGGGCTGTAGG
AAACTATTAAGTATATTCTGGCTGAGCCATGGGCTGCGACAAGGTAACCCATTGTCCCCT
TTCTTATTACTCTTTGTTGCTCATGCTTTGTGTGCATTGTTGCATAAGTCCATTTGGAGT
GAAGTATTGGAAGCTCTAAAGATCTGCCTAAGAGCCCCTCATATATCTCATCCGCTCTTC
GTGGATGATACCTTATTATTTTTCCGGGCCAGATCAGACCAGGCGACTATTGTTAAGAAG
GTGTTGAACATATATACGGAAGTGACTGGACAACTGATTAATCCATCGAAGTGTTCCATC
TTATTTGCTGACATCTGTCCACCTTCTGTCATCTTGGAGGTGTGGGGCATTTTAAATGTA
TCTCAGGAGGTATTCGATCCTATATATCTGGGTCTACATGCCCCGGATGGTAGAATGAGT
AAATGTATTCTCCAGCCCGTTTAGGAAAGGATGAGCAAAAGATTGGTGGAATTGAGCGAA
AGGTACATGGCCAGTTCAAGCAAGGAGATACTGATTAAGGCGATGGCTCAAGCAACTCCC
ACATATGTGATGAGTGTATTCAAGATTCCCATGTCAGTCTGTGATAATCTTACTCATATG
ATCCGGCAATAGTGGTGGGGAGTAGAAGGGGGGAAGCGGAATATGGCTTGGCTCGCTTGG
GACAAGATGATATTACCCAAATCTATGGGTGGCATGGGCTTTATAGACATGCAAGCCTTC
AAACAAGCTCTCCTTGCCAAAGAAGCCTGGAGATTGTTAGAGCATCCCAAGAGCCTTGCT
GCAAGACTTTTAAAGTCAAAGTATTATCCTGTCTAGGACCTAATGGACACAATTTTCACC
GGGAACGCTTCTGGAGTCTGGAGGGGTATTGAGCACGGTCTGGAGCTTGTGAAAAGAGGA
ATGATTTGGCGAGTCGGATCTAGGTGGAAAATTCGCATGTGGCGCGATCCATGGCTTCTC
AGGGGCCCTTTGCTGCGACCTATAACTCCTAAGGAAAGATGTCATCTCAAAAGAGTTGTC
GACATTCTTGACACAAACAGGCGATGGAACCTGGAACTGCTGAACCAAAACTTTTGGCCA
GTAGATGTCTTTACTATTCGCTCTATCAGAACTTCGCCCAGTCTAGAGGAGGACTTCAGT
GAGATATGGAGTTTTCTATGTAAAGAGTGCCTACCAACTGGCAATGAACGAGCATTACAG
ACTCATAATGCGGGTGCCATGAATGCAAGACCAGAGGGTGACCGGACGTGCTAGAATGTG
ATCTGGAAGGAAAATGTCCCACCAAAATGCGGGCTTTCGCATGGAAGGTTGCGGTTGATG
CCCTCCCCGCAAACAGCTACAAGGCTAGGCATCACCTTAATGTGCATGTTCAATGTCCTT
TGTGCGGTTCTAAAGTGGAGGATTTCTTCCATGCTTTGACTCGTTGCCCACATGCCCAAA
GCCTTTGGGATGAAATGACGGAAGAATGGCAGCTACCTGAGAAGGCGAAGTTGATCAACA
TAGGGTCTGAATGGTTATTCGACATCCTGGCGGACCAACCAGTCGAATCAAGGGCGATGA
ACCTCATGCTTCTATGGAGAATATAGAGTTTGTGCAATGACATTGTCCATGGGAAGGTGA
TTCCGGCGCTACAGGCCCCTCGCGCCTTCTTGAGCAGCTTCCTTACATCTTTGATCAAGC
ACAATGACTTAGTGTGGAGGAAATTATCAAGGGCAAGCAGCCATTGAAGAAGGTGCCCAT
CAAGCATTCGTCAGTCCGTGTGCCGAAGAGACGATGGCTCAAACCTCCCATGGGCTGGAC
GGCACTGTCGGTGCATGGAGCTCTCTTTCCAGATACTGGCAAGGCAAGTACCGGCATGGC
GTTGCGGAATTGTGATGGTTCGGTGATCTTCTATGCCTATAGATACCTATTCCATTGCAA
GGATGCTCTTGAAAAAGGAATCAACGCCATATTGGAAGGGCTTTTTATGTGCTTGGAACA
CAATGAGCTCCAAGTGGTGATCCAATCGTATAACCCAACAACCATTGCTTCCTTGATGGA
TAACTCACTCGACCGCCTCTGCCTATGGACATTTCATGACAGAGATAAAGAAGTTACTAC
AACTTTAGAGTTTTATTTTGCAAAAAATTGATTGTAAGCAACTTTAGGGAGATCTGAAGG
TAGCACCGCGTGTTGGTTGCACCAGGTTCCAGACAGCATCAAAGAGCTTGTATTAGTAGA
CTGTAACGGTATTTCAGAGGAATAAATACCCCTATTCTCGCTAAAAAAGGTATGGACTGC
TAACCCAATTTTTTTGAACTCATGAACAGCAATATCCACCATATCATTGGAGCTGCTACT
CTAGTGGTAGAAGACGTCTGGTCGCTACCCTTCTAGCACGTGTGGTCGCCATGTTATTGG
CTGTGCAGAGGTCATTCACAAAGCCACACTCTCGATTGAGGTCGTCGCTCCTTCCATGTT
GCGCTCGTAGGTTCCACCGCTGGATATAGACTACACAATAGAAGTAATTCCTGGGCTGTG
AAAATAAATATAAAAATATATATGGCCCTTGGTGGAGATCTCTATTCATTTTGTAAAACC
CGCCTTCACTAACACCTATATACTCCCTCTGTACCTAAATAATTATAGTTGGAGAAAACT
AGTTAGTAGGTATAGAGGGAGTAGAAACCAAATCCTTCGATCAGTTCTTTTGTCTTCTTT
AGCTAGCAAATAACCGTATTATTAAATGAAACTTTACAAATACTTAGAGAAGTTGTATAT
GTATGCATAGATAATTTCTTGACTTTTTCATCTTTGAAGCACGTCATATAAAACGCCGTA
CAATCTTCGAGATAGGAGCTTTGGTAAGATGTGGTGAAAACTAAATTTCTAAAAAAAGAC
TCAGTTGCTACTGTTAGAGGAAAATGTAATGATTCCCCTATCTGGAAGTCTTTACTTAAG
GTGAAAGATATTTCATGGCAGTAGGAAAGTTGTGATTAAGCTTGGGGACATTGCCCGGAT
CTGGCATGACTCTATAGATGACCTCCCCTACTCTGAGAGAGATCCCCTGATCTTTTTAGC
ATTGCTAATTTCCCGGATGATACTCTGATTCAATTCCGCGGAAGGGACAGCGATGCTTTA
TTCCGGCGAAGACTTAGTAATGATTTAATGAGACAATATAATGATGTTTTTGCTGCGATC
AACCGATTTCGCAATGAAACTGATTGTGATAAAATAGAATGGTATTTTCGACCCAAAGGG
ACTTATGCTACTAAAGCTATGTATTCTTACCTGGAAAGAAACCTTGCTGGTAGTGATTAT
AGATGGATTTGGGGAGTGAAGCTACCATTAAAAATTCAAATCTTTCTTGGCAGCTTTTTC
AAGATGTTGTTCTTGCTAGGGATGTGGTGCGGCGTAGAAACTGGGTTGGTAACCCCCCGC
TGTTCATTTTGTAGTCATAGAGAAACATGAAATCACCTATTTTTTCTGTGTCATGTGGCT
AGAGTTGCTTGGCGCACAGTGGGAGCGATGTTGGGGACTGACCTTTGTCCCAATAATCTA
GCTCAGTTCTATTCCTGGTGCTACGCTTTTCTCCGTCATGGAGAACGCTTTTATACGATG
GAGTTGGCTGCGATTTGCTGGGCTATTTTAAACTGCAGAAATCACACGATTTGAATTCAA
GAAAATTTCATCTCCTTTCGAGACTTTGTTTGGAGCTTGTGTGCACTTGAATTACTGGGC
AGGTTTGCTGAAGAAGGAGGAGCGGATTCTGCTGGAGAATGTGGCCTCGATGCTGAAGGA
ATATACAAAGAAGATGATCATGATTTGTGCCTCAGCTCTGATGAATCGACGAGATGATTC
CTGGAAGATTTACTGGAAGGCTGTGAAAGTTGAAGTGGTCGACTGCTACTGTATGCTTGT
TGTGACTCAGCTAGATGTTTAGAGTGCCTTCGGCTATGTCCTTGTAGGACCGTTGTATGG
ATTGTAGTCTTTTGTGATGTTGCTAGACTTGGTATTGCTAGGTGGCGCGTGATTGGTGCT
ACAGGGTTTTCACCCCGTGGTGGACGGTTAAGATTGTGAATCTTTGCCAAACGGTTTCCC
TGTAGAGCTTGAAATCGCTTTTTCCCTTTTCCTTTTTTTCCTTTCCTTTATTTTCCCAGA
ATCAATATTTCCGTTATATTCTTCATAAAAAATATATATGAATCTACACATCGATCAACC
CGTGAATCATGCGGTACGTTGTCGTCTTCGTCAGCATACGTGTTATCCACAACGAAATCA
AGATGCGGCCAATTTAGCAGCCACCGCCTCGTGTACCACGCACGCTGCATGCATGCATGT
TGGAATGCATCTTCTCTGCATATGCGGCCAGTTAGCGCAACGAAACAATTACTCGTGCTC
CACGCCTGCTTGTCAGCATACATGTGGGAGCATCCTATCTTCATCTTGTCTCGTGATAGA
TCTCCCCTATAAATAGGCATACAAGCAATGGGTTATGCAAATACTCATATCAGTCAAGTT
CACGGTAAGCTCGATCCCATTTAGCTGGTGAGTAGTATTAAGTTCCCAGTCCCATATGAT
TTATGTACATAAAGATTTGTAGTCTTAAGTAGTCTGAGCTATGGTTCAACTGTTATTGTC
GTCTGTAGTCTCTGAACTGAACTATTTCGATCAATTGTTTTGCAGCCCGCCGAATCGAGG
ATGAGCTGCGCCGCCCCAAAAGCCCCCGCCGGAGAGGAGAAGAAGACGTCATGGCCGGAG
GTAGTGGGAAAGTCCATCGAGGAGGCCAAGGAGATCATCCTTAAGGACATGCCTGACGCA
GACATCTTCGTCCTCCCAGCCGGCTCGCCGGTGACCCTTGACTTCAGGAGCAACCGTGTC
CGCATCTTCGTCGACACTGTCGCGTCCACTCCCCACATTGGCTAGCTAGCTTTGC