Contig Data
morexGenes
Links



Map Locations of contig_244235 (5693 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_244235

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34604 2 1781 bp MLOC_34604.1 Available Available LOC_Os12g31340.1, FRAME:+1, EVALUE:1e-117, 13112.m03190 protein OsFBD15 - F-box and FBD domain containing protein, expressed





CDS Structure of MLOC_34604






Contig Sequence (5693 bp)

>contig_244235 5693 assembly3_WGSMorex_rbca.fasta
TGTACTTCGTTTGTGTCCAACGACCAGACTAAGACACCTAGTAAAGATCTTCTGTTTAGA
TGGTACGTGTAGTTTCCACATCGACTCCCAGCCTTGGCGCTCATTGAAAAGATTTGATGA
TTCATTAGCTCCTTCGATCCAGTCATCCCTGCTCATCTTCACTTGGTATATGAGATTATA
GGTTGTCCTGATAGAGTAAATACCCCTAGTGTCTTCCGACTAGGCCCAAAAGTCCTCCAT
TTGACGCATACAGATGGGAATTTTAAGAATGGATTCAACGTCAATCAACAGAAATACCTC
GCGAACCAGTTCCTCTTTCCATTCAACGCTTGTGAGATTGACCAGTTCAGCCACTAGCTG
TGGCGGATTAGCGATTAGGGAGGTGAATCGCTTGAAGAGACCATCTCTAGGAATCCAGCT
GTGTTCCCAGATTTTTGTGGAAGCACCATTCCCAATGCGATGAATAATACCCAGGTTCAA
GATGTTCCTTCCATCTGTCACAACACGCCAAATCTGGGATGGGTGGGATCCAAGTCCTGC
TTCTAGGATAGAGGTATTCGGTTAGTAGAGTGATTTAAGAATACGAGCACTCAACGTGTT
AGGCTCCTGGAACAGCCGCCATACTTGCCTCGATAGCAAGGCGAGGTTGAAGATCTCCAT
ATCCGTAAACCCAAGCCCAACAAGGTTTTTTGGCCTCACGATGACATCCCACGATACCCA
ACAAGGCCTTCTCTTCCCTTGCTTTCTCCCCCACCTAAACTGGCGAATGATAGATGTTAT
ACCTTCACACAATCGTCTCGGAGTGTGAAGCAAGACATACAAAAAAACAGGGATGGATTG
TGCCACTTATTTGATGAGTACCTCCTTCCTTCCTGCACAAAGTAGTTTTCCATCCATCCT
TTCACCTTTGCGCAAACTCTATCGTGCAAATACTTGAAAGAACCATTCTTAGACTGTCCC
GCCTCTGTCGGCACGCCCAACTATTTCTCATTCATCGACTCATTCTACACATTTAGACAA
TTCTTCACTTCCAGTTTGGTAGAGTCGGGGCAGCCCTTACTGAAATAAATCGAGGACTTC
TCATGGTTCACTCGTTGTCCCGAAGCAGCGTAATAAATATTCAGTAGGTTTGATACATGA
TTTGCACCCTCCACACTAGACTTAAAAAGCAACAGGTTGTCATCTGCAAATATAAGATGG
CTCACAACCGGTGTTGTAGGGGCCACCTTGATTCCAAGTGATGATTACTGAGAATTGAAT
TTTAAAAGGCATGAAGATCCCTCTACTGCAAGTAAGAATAGGTAAGGGGAAATAGCATCT
CACTGCCGATTCCCTTTGGATGGTTTAAACTGCTCAGCTTTTCACCGCTGAACATGACCG
AGAATGATACATATCTCACCATGGTCATTACAATCTGGATCTACTGGGTGCGAACCCCGG
TTTACTCATAATGGCCTGCAAATAATCCCACTTGAGCATGTTAGCCACCATCTTGGATGC
TATTCTATAGAGCACATTACGGAGACTGATAGGTCTAAATTGAGTCAGCTGGGTCGGACT
CATTACCTCCGGGATCAACACAAGAACGGTGTCATTAATATTCTCAGGACTCCCCTCCCC
TATTACGATGTGCATCACCACGACAGAGACCTCATCTCCACATATATCCTAGTGCCTTTG
ATAGAAATGCGCTTGATACTGTCGTGGCCAGGCGCTTTGGTTGGAAAACATATGGAAAAG
AGCTTGCTTCACCTATTCATTCGTATATTCAACACACAATGATTAATTCATGGCCGACGT
TACTTTGCATGGTACATGCATTAGTACATCCCCTATACCCGTCACACACTCGAAAATATA
CAATGACTTGTAAAATTTAAGCACCATTGTTTTTAAAACTGTTAGGTCCTCCGTGTATAT
ACCAAGGTAGGAGTATAGCGCCTTGATCATAGTTTTCTTTCTCCTCATGCTGGCCCACAT
ATGGAAAAATTCTATGTTTTTATCCCCTTCAGAGAGCCATTGCAGCCTTGACCTCTGACG
CCACATGATCTGTTTCCTATGGTATAATTCGAAAAGCCTCTCGTTGATCTTGATCTCTCT
GTGCATAGGTCCCGTTCTGGCCGGATCGTCTCGAAGTTGCTGTAGCTAGCGCGTAAGAAC
TCTAATTTCCTTCTGGACACTACCAAATGACCCCTTGCTCCACCCGTCAGGTCCTTGGCG
ATCTTTAAAAGTTTGTCGCGAAGATTTCCCACCCCATAGCCAGGCGAAATTGAGTTCCAA
CGAGTGGATATAGCCTCCTACGAGTTCTCATGCGATACCCACATCACCTCTATATCTAAA
ACTCGTGAGCCGAGTGTTGTTCCCTTGTGTGCTCGCAAATTCTAGCAAGATTGGCCCATG
GTCAGAGGACACAGCCATATGGTGGTTCAACGATGCCAACGGGAACCTAACGTACCAACT
CGGTGATGCCAACACGTGATCCAGTTGTACACGAGTGTACGACCCACCATTGACATTTTC
TCAAAGGTCGAGAAACGACCTTGGTAGCCCAAATCAATGAGCATGCGAAGATCCACAACA
TCCCAAAAAACTGAATTTGAGCGTTACTCCTGTTTGCTACTCCTTGATGTTCATCCGGAT
GTAGAACTTCATTAAAATCTCCCATGCACAGCCATGGCCCATGGGAGAGTATTCAAAGTT
GCTATTCCCTTCATCATTTTTTTAGACAAACTATTCCCTTCATCAAGCCCACGTTTGGTT
GTGTCGCAGCCGGCGCAAAACGCAAAGCAACATAAGCAGAAGGCCCAGCCCACTGCACTG
CCCTCCTCCGAGGGAAAGGGAAAAAAACTCAAACCGAGGTTGCGAGTTGCGACCACGAGT
GCGGCGGCGCTCCATCCACCTGTGCCCTAGTCCGGCCACCGTCCAGACATGGAGGCGCGC
GGTCCTAGTCGTAAGAGGACCAAATTTACGGCGCTCAAGACCCAAGAGGTGCTGCCGGCC
CCGGAGGCTTTGGAAGCCCCCGGCCACGGACCACCTCCCTCCGCCCACAACCAACAACCG
CCGCCCGGAGTCGGGGACGACGAAGAAAGCGCCGACCTCATCAGCAACCTCCCCGACGCC
ATCCTCGGCGAGATCGTCTCCCGCCTACCCACCAACCAAGGCGCCCGCACCCAGATCCTC
GCGTTCCGGTGGCGCCACATCTGGAGCTCCGCGCCTCTTAGTATCGACTGCGAAGGCCTC
GCCGCCGATAACGAGGTACTCGCTGGCATCGTCTCGCGCACGGTTTCAGCGCATCCGCCC
CCCTGCCGCCGCTTCTGCGTCCCCTCGTGCCTCCTCGGCGACCGAGCGTCTACGGTGGAC
GGATGGCTCCGAACCCCCGCTCTGGACAACCTCCAGGAGCTCGAGTTCTGGTTCAAGCCA
TACTACCGACCACAGCCGCTGCAGCATCCGCCACCACCGTCCATGTTCCGCTTCTCGGCC
ACGCTCTGTGTTGCCACCATCGGAAATTGCAACCTTACGGACGGCACCGTCCAAGGGCTT
CACTTCCCCCTGCTTAAGCAGCTCGGACTTGAACTTGTCAGTATCTCCGAGTGCTCGCTG
CATAGCCTGATTGCTGGTTGCCCTGTTCTGGAGTGCTTGCTGATTAGCCATGGATTCGGC
TTTCGCTGCCTCAGGATCAACTCCCTTACCCTCAGAAGCTTTGCTGTCAAGAACTATCGG
AAATGCAATGACCAGTTAAAGGAACTCATTGTGGAGAATGCACCTTGCCTTCAAAGCTTG
CTCCATCTTGATTTTGACTATGGTCTGCATATATCAGTACTCTCCGCACCTAAACTGGAG
ACCCTAGGCTGCCTTTCTGATGGGTTTTACATTTCCAAGGAGGAGGATCTCTCCAGATTC
GTGTTTGGTTCCACGGTTATTCAGGTACCTTTGCTCATCCTACTTGTTGCCTTCACGAGG
CTTCTCAGTTTCATCTCTGTGTGCAGGAAAAATAAAACATTGTGCACTTGTCGTTTCCCT
AATTTTCTCTATGATGCTTGATGAAGGGCTTGCGTGTTGATAAACTAACAACGGTGGTGC
ACATAGTGAAGAATTTAGCCGTCAATATGAAGGTTCTTAGTTTGGATACAATTATTGAGT
TGATGCGATGCTTTCCGTGCTTGGAGAAGATTTACATTGAGGTGTAAATTATTCATTTAT
AATTCATTGCCTTCAAATGCTCATTTGATCTACTACTTACTAAACTGAATTGGTTGGTTT
CCATTTGTCCATGTTCTTTTTCAGTCAGAGTCAAAGAAGGAAAAAAATGTGCGCGGTCGC
AAACACCAGAATCTTATCAAATGCCCTAACATCCGTCTAAAGACAATAGTATTTGAATGT
TATCAGGGCATTAAGTCTGACATTGAATTTGCTTCATTCTTCATACTGAACGCTACAGTG
CTTGAGTTAATGACACTTCAGATTGGAGCCAGGGATTACAATGAACAATTCTTGGCAGAA
CAACGTAGGAAGCTTCAGATAGAATACAAGGCTTCACGAGGTGCTCGGTTTCATTTTACA
ACTGATAAATGTGCTCGCGGTGTTTGGGATGTGCATCATGTCCGTGACTTGGATTTAACT
GATCCATTTGTATGTTAAAACTGGCTCTTGTCCATTTTGGAATTATTCTTCAATATTAAC
CTATCTCAGTTGTTATTCTGTCAAAACATGATTGCTTTTGGTGTTTGCCATTTTGTAACT
TTATATTATCTGAAACCTCAAACATTTAAACTAGCTGTTTGTGTCTTGTCATATAGCATG
TGACGGCCTTGCAATTTATGAAGCACGGGTAACCTGATTGTAATTTTGAGGATAATTAAC
AATGGTAGGCAGCTACAACTTATTTTAATTTATGATGAAACACCACCAACATATTGGAAA
TCTGCGTGACCAGTGTTCATAATCTGGAGTAAAAGGATTTGAGTACAATTCCCTTTTATA
TAACCCGTGGCTTAATTTTGTTATATTTCAAGTTTTGTGTGGCCATTTAAGTCAGTTGTG
CTTTGAGTCTATTTTTTCATGTTTTCTAATCGTAAGACGATCACTGTATGGATACTTACC
TGTGTTGTTTTGGCAAGGAAATTACTTGTCCAACAGTACTAGCATGGTATACTTTTGTTT
CTAAGATTTTAAGTCTTAGCATTGACCACCTTGTTTGGTTGGGAATGAAACAATTGTACT
TGATTCTCTTTTTTGGGTCATCTTAGCATTGACTGCCTTGTTTTTTTTTTTCTCGAGAAA
ATGCAAAAGCCTTTGTGTTTCATTGCATTGAAAAGAGGGGGGAAAACATCCTCCTAAGAG
GCCAGTATAACGGTGTTACAAATGGATCAATGGACGTCCCAGGAGGAGGGCAGGGTGACC
CTAAGCCCTTTGGCCCCTGACTTAGCCCAACTTCTGGACTCGTCCTTGATCGCATCAGCG
AGCTCAACTAGTGATGGGGTTACATGGTCAAATACACACGCATTTCTATGCTTCCAGATC
ATCCAAGGCACCAAGAGCGCTACGGGGGCCAACGCTTTGCGGAGCAGGGGTGGCGTAGCG
TCGCGAGCCCGCAACCACTAGTCCTGGAGCGTGGCGTCCTGGTCAGGCACCGGAGCCGGG
AGACGCAGCTGGCGTCCTGGTCAGGCACCGGAGCCGGGAGACGCAGCCAGGAC