Contig Data
morexGenes
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Map Locations of contig_244216 (5439 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_244216

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34595 1 2080 bp AK249251.1 Available Available None
MLOC_34594 2 900 bp MLOC_34594.2 Available Available LOC_Os10g35000.1, FRAME:+3, EVALUE:1e-36, 13110.m03126 protein G-patch domain containing protein, expressed





CDS Structure of MLOC_34595






CDS Structure of MLOC_34594






Contig Sequence (5439 bp)

>contig_244216 5439 assembly3_WGSMorex_rbca.fasta
CCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCCACCTCCAGCG
TGATCGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCATCGTGCCGCAGTTCGCCGGTC
GCCGCAATCCCCCGAGATTTACGACCTGTTGCGGCGGCGGCGGCGGCGCGGATTGGGATT
TGAGAGCTTGGTTGGTTGGGTGTCGCGGCCGCTGGGGGGTGGGATTATATCTAAGCCTGG
CTCGTTTGATAGGCCGTCCGATCCGCGACGGACGGCTTTGATCGATCGGGCCTGAACCGA
CCCGTGAACGAGCCGGACACGGCGAGGACCCGTGAGACGGAGGACCAGACCGGCAAGTAA
AACCAAAGCGGCGCACCGCGCACGCGACGCCTGAAGCGAGGAGAGGAGAGAGGGAGCCGG
TGAAGCGCGCGGCGAGCGGAGGCAGAGGGAGGGGCGCCGCGTTCGCCCGGTGGGAGAAGC
GATGTCGTCCATCGGCTCCTCCAACATCGGCTTCCAGGTCCGTCCCTCGCTTGGTTTTTT
CCCCTGCCCCATCCATCCTTCCCTCCCTCCCTCCCCTCGCGGAGGATTAGGGTTTGATGC
TTTGTTACCCTGCGTGAGCCTGATGGTCGCGTGTTGTTGGGTTGGTGCAGCTGCTGAAGA
AGTCCGGGTGGAAGGAGGGCACCGGCCTCGGTGCGCAGGAGCAGGTCCGTGTCTCCATCC
TCCTTTCTCTTCTCCCGAGCCAAGATTTCATTTGTCCATTTTCACCTACTAATTCTTATG
TTGATTTTAGGTATAATAATTGTATTAGTTGTAGCATGGTACTCCCGACGCGAGGCTTAA
TAATCCTTGTTTTCCTATTCTTGTTGGTGTCTTGGTACTAGATTATGGGTTCCATTGTGA
ATCAAACTGTTCTGTTAGTAATAGGCTATGAGACCATTGCGAATCAAATTATCTCATATT
GTGGGAGAAATAAAGCTAAATACTTGAACTTGTTAACTAAACAACTTACCTTCGTTTCTG
GTAATCTTGTTCAATTTGCAAGCTCAGGATGCATCCATGGGTTTTTAAATAACAAATTGT
GGTTACATGGCACTGGGAGGAATCTGGTTATCGCTTATATTTGCCTAGTTACTCTTGTAA
TATTAATTCTGTTTGCATACTCACTTCCCAACTCTGAAACAGGGGCGGTTGGAGCCAGTA
GAGACTCGTGTCAAGAATAACAAGCGTGGTTTAGGTTCCAAAGAACCAAAGCCCAAGGCT
GAGGATGATGTTGAAACGGCTCCTAGTAAAAGGCCCAAGGTGAGCAAAGCATTATTGTTA
ACTTGATTCCAAAAATTGTTATGTTGTTTGTAGTTCACGAGTTCTGCCAATTCTCACAAA
AATTCTTTATTACTATTCGCGTGATACTGTTTGAAAAGGCATCTGTGTTTATAGTTAAGC
AAACGTGACACATTATACTCCCTCCGTCCCAAAATNAGTGTCTTAAGCTTAATACAATTT
TATACTAGAGCTAGCACAAAGTTAAGACAGTAATTTTGGGACGGAGGGAGTATCAGATAT
TGTAAGAGTTAGAGTAACTCTAGCAGAGTCACTATACTGCCAATATGTTGATTTCTGGCC
AAAAAAGGGCACTTTAGCAGAGTCACCATACCTATCAGAATCGCCATAATTAATGAAGCG
TTCTCTCCCAGCCTCCATATTTGCCGTTTGGGGGACAACATTTGGAGCGCATTCCATATG
ACAGTTGTGTGGGGCGCGAAGAAAACTTCACGTGGCCCCCACCTCATGCAGGGTGGCAGG
GAAATTGGGGGAAAAGGATGTCCCATTGACAAATAGGTCCCATGACATGGAGCGGCTAAA
TATGGCGACTCTGACCGCCAATATGGAGTACTAATATTGTTGTGTCCATTGTGCATTTCT
GCGTCTAGAAGACTCGAACCAGCTTACCTGTAGTTATCTAACGTGATGTCACAAATATGT
TGCTATTGTCAGCAGAACCCGCCGTCAACGAAGAAGGCAAAGCTGGCCGCAAAGAGGATA
CGAAAGATGCAGGAAGAGGAGAAGAGAGCACAAGAGAAGGAATTCGAAATTGCTTTCTTC
AGGGAATTTTGGCCTGATAACGTGTAAACCACAAACCTGGCGGCGTTGCAACTGTTGGCA
TCGGCTGATAATGCCATTGTATAGCTTATCGATGCTTCTGCAACTTGCACCTACTGTTCA
CTGTTTCTATCTTGTTCTGGCCCGAGTGTTACATTGATAGAGATATGTTGTAACAAATGT
TCTTTGATTGAAGAAAATGCGACTTGGGTTCCATGCATTGCTGGGGCATATAGTATGCAC
TAGCACCTTTGAGCAGTACTAATGCATGAGGCAACCGAAAACACATTTAAAAGCTGTGAA
AAGTCCGGAAAAAAATTTATGACATAGAGATGAACATTTGTTAAGTGTCAGGTTTGAATT
CAAATTCATAACTTTGATACCAAAAAGGCAAAACGGGGTGTGAATAATATGGGTTGTTGA
ATCTCACTAACACTTGATAATAGTTATATTTTACATAAATGTTAAAAATCTGACAATCAG
ATTCACTATGCAAGAACAGAAATATAATGGTCATGCTTCCTATTTTCGATCTTCGTTGGT
GAAATTTTTGTTACTCGATTTTCCAGGAAGCTTTGTTTGATTTGTGTTAGTTAATTTGAT
ACTCTTTGTTACAGAGTTCTCTTTAGGGACGCGGTTAATGAGGGAAAGAGAGGTATGCTC
GCACATGATGATAAGTTACAACAAAACCACATTTATTACAAAGGGAACTGCAGTGACTGC
GGTACATGACCAAAGAGGCCAAAAGCACAGAGGAGAAACAGAAACGGTTTCAGTATGGTT
TGAAAGAATGCAGCAGAAAACTGTCACCTTGTGGTGTCAAATCCGTCTATACAAATACTT
ATGCATGTCAGGATCATGCAAAACCATGCCCTAGCTACAAAACAGCAGCTATTGGCGCCA
CAGCACCGCGTCTGGCAGGAGCTCGACTCTGCTGGCTACCTAACAAAAAAGTGTTCTCTT
CCCATCATCCCCTCTAGAACGCCAACTCTTCTTCCTCTTGACCTGCTGTTTGAGGCAATG
TGCCCGCCGTCGCGGCATCCCGAAGGTCCTCAGCCTTCTCGGCGCTGATGTCGAGTAAAT
ACTGCAACCTCGACAGCTTGTCCTGCTTCGGAATGCTCTTCATGTACACGCAGTACAGGT
CGTCAAGCTCTCGCGGAGTGGGCCATGACAAGGGCTTCGAAGCAGGCACCGCCGCGTCAC
ATGCGAGCAGGTCGTTCAGTGATGAGATCTGCATCAGACATGAAGCAATGGAATTTTTCA
CCACAAACTTCAACAAATTTGTATAACCTAGCAAATGTTATACCTATATCTAGGAGCAAT
TATGTAATAAATTTAACAAAACGAGCACACAAGGGGTACACAGTACGTACCACGCCATCT
CTCTTCTTCTGCCGAAGCAAAGCAACAGCCTGAACAAGGGCATTCTCCAACCTAACCTTC
GCAATGTCCTGAACAATCGACCTGGCCTTCTCAGCACTTATGATGAGATCAGCTGGCATC
TTTACATACACTTCCTCTTCATCAAATTCACCTGTGCCTGATGAGAATATCTCCTCAGCA
CACTTTTTGTAAATGGTTTCTCGCAGTGGTTCTGAAATCAAGCTGTCCAGCTGGAAATTT
GCGTCTTTCAATCCTCGGACCTGCTGAATACCAATCTGTCCTCGCGATATAGAAGCTTCA
ATTGCACTAGACAACTTTGTCGTTGTGATGCTCTTAATGATTTTCTGTGCATGCTCAGAT
GGCAAACCAACCTGCTTCTGTATCTTTGCAAGCTGATCAGCCTTGGATTCTGTCAACTTC
CCATCAGCTAGAACCACTTCAGCCTGTTGCACAAATGCTTTTTCTGCCAGCTTAATGTGG
ACATCTTGAGCTTCTTTGCCAGTTAAACCAAGTATGTGTCCTAATTGCTTTAGCATTAAA
TACTCTGAATCGTCTTTCTTTGTGGAGATTGCTGTCCCGAATGAAACATTAGTAGTCTCC
CCGGTGATACAGAACATCAAATATGTTTGATACAGCTCAGCTCTATCTCTCAATGGAAGA
TCATCCTTGAGGGTTATCTCTTTCTGACTTGACTTGCCCAGCTTTTCTTTCAGCTCTTTA
TCAGGCCTTGTCTTCTTTAATGTTTCCAGTGATTCCCATTCATAGTCCTCATCCTCTTCC
TCAGATTCAGTCGTTTCAGGTTCTGAGGTCGCACTTGATGTTGCAGGTTCAGCAGTTGTT
AGCTCTCCTTTAATGTCAGCTAGAAGTTCACTCACAACAACTGTGTTGAAGGAAATTAAC
TTCTTCAACTCTTTTGCCTGTTCAATGCGATTCCCAGCTGCTTTTGCTTTCTGAATGTAG
TTCAGGAATAATTTTCGTACCTGCCATTTGAATTTGGAAATACAGAAAATTAATTTGATC
TGCAGTTAGACTATACCAAAAGATATATGTAGTAGTGGTAGGTTTTACAGAAAAATATAG
GCCAATCTATATAGCCTAACTTTTAGGGAAGAGGCATACTGCTTTACTAAAGATGGTCAT
AGCAGCCTCCTTTTTCAAGTTTAGACTCTGTGCTGCTTTTCTAACTGCCTCTCGTCTATC
AGCGTTGTATCCATCAACTGACAAAATTGCTTCCTTGACAACCTGAAATGTCCTAAAAAG
GGTAAGAACAACATTTACACAGAACAGGCCATCAACTTTGTTGAACTAATGCAGATCTGG
AATTGAACCTAAAATTATGCAGTGCTAATGAAAGGCAAAGTAAAATACATCACCTTTTCA
AACAATTGACCGCAGATGTCACCATGAGCAGCATCAACAGTTTCTTGAGGAATGCAGAGA
CGCACTTGGAATGCCGTCAAAGCTTCTGTTTCATCCTTGCTCAGCTCTCCGTCAGCTACA
AACTGCTGAAGCTTCTGTCTGTAAATGTCTGAAGTACGAAGCGGCATTAATACACGCTGA
CAATCACAAATACAAAGGCAGTAATTTTAGTCATATCATATTCGTCTTTCTTTCCTACTC
CCTCTGATCCATAATAAGTGTTGTGGTTTTAGTTTTAGTTTGAACAATAACCGCGACACT
TATTATGGATCGGAGGGAGTAGTAAAAATCCATTCGTGCTCATACAACACAAGACCGGCA
ATGTAAAGATTAAGTAAATGCAATCAGTTGCCTTGCTGCATATTACTTACTATAGTCAAT
GTAAAATGTTTGCAACTAAAATAATAAGCAGCAGTACCAGCCCAGAGCCAATGCCTGATG
GTATATAATGAATGATTGTGTGTATGATGTAGCACAAGGATATAGGATACCATATAGAAC
CTAGTAAAACCATATTCTCAATTTGACTCGTGATTTTCC