Contig Data
morexGenes
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Map Locations of contig_244188 (6050 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_244188

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34572 2 2548 bp MLOC_34572.1 Available Available LOC_Os05g06150.1, FRAME:-2, EVALUE:0.0, 13105.m00654 protein vegetative storage protein, putative, expressed
MLOC_34571 2 1316 bp AK371460 Available Available None





CDS Structure of MLOC_34572






CDS Structure of MLOC_34571






Contig Sequence (6050 bp)

>contig_244188 6050 assembly3_WGSMorex_rbca.fasta
TTCAAGGGTGCCGAGATTGCCATGGCGTCATACTGCTCGGAGCTCCAATTCTTGGGCAAC
CCCGTGACCAACCATGTCCAGAGCGCGGAGCAGCACAATCAAGACGTTAACTCCCTCGGA
TTAATCTCGTCGCGGAAGACCGCTGAGGCCATCGACATCCTGAAGCTCATGTCCTCTACA
TTTTTGGTTGCGTTGTGCCAAGCCATCGACCTGCGCCACCTTGAAGAGAATGTCAAGAAC
GCTGTCAAGAATTGTGTCACGAGAGTGGCTAGGAAGACCCTGATCACAAATGACATGGGT
GGTCTGCACAACGCTCGGTTTTGTGAGAAGGACTTGCTCCAGACAATCGACCGGGAGGCA
GTGTTTGCATACGCAGACGACCCTTGCAGCGCCAACTACCCTCTCATGAAGAAGATGCGT
GCGGTACTGGTGGAGCATGCCCTGGCCAACGGCGAGGCTGAGCGCAACGCGGAAACCTCT
GTGTTTGCCAAGGTTGCTACATTCGAGCAGGAGCTCTGCGCAGCACTGCCTCAGGAGGTT
GAGGCTGCTAGAGGTGCAGTGGAGAATGGCACTGCCACAGAACCGAACCGTATCGCTGAC
TGTCGGTCATACCCTCTGTACCGGTTCGTGCGCAAGGAGCTAGGGACGGTGTACTTGACC
GGAGAGAAGACACGGTCACCTAGCGAGGAGGTGGACAAGGTATTCATTGCCATGAACCAG
GGTAAGCACATAGACGCTCTGCTGGAGTGCCTCAAGGAGTGGAACGGTGAGCCTCTGCCT
ATCTGCTAATCAAGGAAGAGAAGATGCAGCCCTTCAGAATTTCTGAAAACTGATAATACT
GTTGTTTGAGTTTATTTACGTTTCCACTTCTAAAGTGTTGATGCATGCGACATTCTTCCG
GAGCTAGAGTCTAGAGCTTCTGCTGATGTAAGTGAAAGGGTATAAATTTTCATGACAAAT
TCCATAGAAGCCGGTCTAGTGCTGTATCAACAAGTACAAATTTATCTATAGTTACCACAT
TGCATTGCAATATAAAGAGAAACAACACCGACTGGCATCGGATATTTAGATTATCGTACA
TGTTCAGGCACAGGCAAATACTAAGTGTATCTAGTATCCAAATTAGATGAAATCAGTGCT
CCCTCAAAACCTGCCTAGACACAAAAGAAGGAAAAGGAGAGGACAGCAAATATTTTTCCA
TCCCCGCAAAAATAATAATACATTTTGCCATGTAGAAGATTCTAAAACTACAAATATTTC
TCTAGCTACTCTGTGAGATAAGTACTCCCTCTGCCCCAAAATAAATGTCGCTGATCTAGT
ACAAAAATTGTACTAATTTAGTCCTAAATCTGCGTCACTTATTTTAGGACGGAGGGAATA
GAATTTTAAGACAAGGAGCCAAAGGAACATTTTAAGAAACTTTGTGTTATTCACTATGGG
GTGTATTTGATGCTCTATGAGGAAGGTCTATGTAAGAGCTACATGCCATACTATCATCTA
ACAAACTTTAAACATTCAAATTTTCATTTGTGCAAGCTTTCATTCCTTCGTTACAGCGGC
GAGGGCCTACCGCCCAGAGATGCTATCACTATCAGAGTAGGAAAGTAATGCAAGACCACA
CTGCAGAGGCTTATAAGGAGCAGCAAGTGAACATACGTCATTATTTACCTTTTTTGTGGA
TACTTTTTCTAGGAATTTAGTTCAAATCAATGCGATGCATGTATTTGTACGATCTAATCA
TACAAATTATATTGCACCAAATGTCGGTTTTGCTGCTGAGAGCATATGCATTAATTAGAT
GGTGACACTCATAACTGTAATTGGCATGATTATCTTTTGTTATCTTTCTAGAAGAAGAAT
TATTTTGCCAAATAAATGAGTTTAATGGTCACTACCGTCTACAAATGAATGTTATGTTTT
TGGTAGCTACATCCGTATTTGTTTAAGAGTTCACTGATTGGATTTGTAATCACTATTTTT
TTTTCCTAAGCCAACCAAGGATGCTGCCATAAATCTCAAAAATGACAGTGGAAAACAATT
TTCTTGTAATTACAAGCATGACTAGACATTCAATGCCCCACAACAATTATTTCTACTGCA
GAGAAGAGAACATGACAATCAGTTTAATCCCAAAAGTATATAGTAAATATATTAAATCTT
TATATCAATAATGCAAATGAAAGAAAAGCGGAATAGTTACTAATAGTCTTTTTCTTGAGT
TAGCTTTCTGCCCATTTCAGGACTGTTGTGAAGCATATTCAAATTAGAATAGAGTATTCA
AAATGTTGACCATGAAGTATACACCAAGATACCATGATGAGTTGTAAGAAACGTCAAAAT
AGAAATCACTCTGAGTTGTAAGAAACGTCAAAATAGAAATCACCATGAACAACTATTCTG
ATTGATTTCTTCCATATGAAAGAAATTTCAATTCTCAGCACTATGTATCTCATATGTATA
GTTGGTGTCCTGATGTCTAGCAGTCAAAACATACGACAAAGACAAACAGAACTGTGTTTG
CATTGAAACATGAACACACTTTTTAGCAGAAAGGCTTACACTTCAATCTTCTTGAAAAAG
AACTGTGCAGGCAGAACACATGGCCCATCTTGAAAACTGGACCTTCACTTCAATCTTCTT
GAAGCATCTCCTTGACCAGATTTTCCTTCAAACAAAAGGCAGTAGGAAAAACAGAGATCA
GTCCCTTACAGTCATACAACCATAGCCATACAGTCGAACAACATACTAAAGCAGATACTT
ACCAATAAGAACAAAAAGATAAGACCAATGAGATTAAGGATTATCAACTCACATCCTATA
AGGCCATCGATGCAAGTTTTTCGACAGCACTAACAAATACTTAACTTTTGTTTTAATAAA
ATTTAGGGCTTCTTTAATTCGCAGCATTTGAAAACACACAAGAATAGGAAGGGATGTCGA
ATCCTATAGGAGTTAAAACACATGAATATGTAATAGAAGTTGTTTGGTTGCACCACAAGA
AAAATACATGAACTTTCTTGAATGATTACGTCATTGTCATAGTCATCATCGAAACAAAGG
CAATTTTCCATGAGGTTTGGCTCAATAGAAAATTTCCTTTGGAATTGCATGCAGAGTTGT
CCATATAAAAAGGAAATCTATGTACTTTAATTCTATATAAATGAGACAAGAGCTATAGGG
GGATAATCCAAAGTAGAATCCACCGAAATACCTTTAGAATCAAAGAAGCTTACTTATTTT
ATTGATGAAATCTTGCTATTTCTATGAAACGAATAATATATCCATCTGTATCGACAATTC
AATTTATAAAAAAGACTTATGCATGGTCGATTGAAAGCAGTATCATGAAAACCGTCACAT
GTAGCATAATCTACAAAACACAGATAAGCAAATCGCCGGAGTGTATCACCTTACTTATCC
TCTTGCTGCAATTCCAAATTTCCAAGGACATATTTTCATCTCACAGTCTAATTGACAGCA
TTAGTAGCGCTAGTTCTAAGGAAAACAACTAACTAGGACAATGCCCACTCTTCAACAACA
TTTAAAGTAGCTCTGATCAGAGAGCATCACAAGAAATTGTCCATGGTTTTGAAGGAATCA
CCCATATATCTTCCTTCAAAGAATCAAGAGTATGCAGTACATTAACCAATTCAGGGTGAG
ACTGGTCAGCCATTAGAAAGACATGAACTCCATCATGCAATTCAACCCAACTACATCCAG
GCTCTTTCTTCACCCACTCTCTGTTCATGTTCTCCCTGATCATCCACGTCTCATGCCAAT
CGTCCTCCGATGCATGTATACTTGATAAAGCAACCCAGTTACTGTGGTTTTCTGGATCAA
GCTCGAGCAGGCGGGACGCCGCAAGCTGACCCAACTTAGCATCCTCATAGATTCGACATG
AATTAAGTAACGCACTCCAAGCAGCGATGCTCGACTCAAACGGCATATTTTCAATGAATT
CAAGAGCATCTTCTAGGTGACCTCTCCTGCAAATTAGATCTGCCATGCAACCATAGTGCT
CAGGTTGCAGCTTAACCGAGCTCTGGCCATCGAACAGAAACTTGAAGTAGCACCAACCTT
CTCGAACAAGTCCGCCGTGGCTACAAGCTGACAACACTGCAAGATATGCTACTCCATCTC
TTCTGATGCCCAAACTTGCCATCCTATCAAACAAGCATACCGCATCTTGTGCACGGCCAA
ACTTGCCATAAGCTGAGATCATCGTAGTCCACAAAACAGCATCTAATGAAGGTGCCGCAT
TGAAGACAAGCTCTGCTGAATCAACACATCCACACTTTGCATACATATCCAGCAAGGAGT
TCCTTACAACGACATCGGACTCAAATCCTGTACCAATAACCCGTGCATGCACCTGCGTCG
CCTGTTTTAACAACGCCAGCTCCCCACACGCATCCACAGTGATGGCATACGAGAAGCCAT
CTGCGCCAGCCTCACAAGAAACCATTGACCCAAACAAGCCCAGAGTCTCCTCAGCTTGCC
CACTCCCAAGATACCCAGCCATCATCGAGTTCCATGCAACAACGTCCCTCGCCACCATCA
CCCCAAACACTCTCCTCGCATAGTCAACATTCCGGCACCTCGCGTACATGTCAAGAACCC
CGTTCTCCACAACTGAATCGACCGGGCCATACACACTCATCTTGACAACCCTGGCATGGA
TTTCCTTGCCGGTAGCAAGGGCGGCCTGGCCAACCCCGGCACACGCGAGCAGCCCGCCGG
ACAGCGTGTACCCGTTGGGAGCAACACCGGAGTCCACCATGCGCCGCAGAAGAGCGAGAG
AGTCTCCGTGCAGACCCTGGTGCGCGTGGCCGGTGATGAGGGACGTCCAGGAGACCACGT
CCCGTCTGGGCATTTCGTCGAACAGAGCGCGGGCGTAGCCAGGGAGCCCGCACCGGAGTG
CCAGGTGCGCGAGTGAGGTAGCTAGGATGGCCGACGCGGACAGACCGAGCTTGAGGAGGA
CAGCGTGCAGGGGTTTGACATGGGGAGTGGAACGGCAAGTGGCGGCGGATTTGAGGGCGC
CGGCGAGGGAGGTCGCGTCCCACTGCAACATCCGCATCGGGGAAGTCCTATTTGACGGGA
AAAAGTCCATTTTAAACCTTGAACTGGTAGTGCCTCGGCGANNNNAACCCTGAACTCGAA
ATCCCTGTCGTTTGTGTCCTGAACTCTTAGATCCCGGTCTAAATCTAACCTTGACAGCGT
TTTAGTGGGAAACATGCTGACGTGGCCAGGATTTCTTTATATCTGGTGGGACAGTTTGCT
TTATAACGGCAACGCGCGGGGAGAGACGAGGCAGAGGAAGATAATAGAGGCCAGAGGAAA
ACATGGTTAGGGGCAGCAGCGGCGGATCCAGAGCGGCGCGGTGGCGGATCCTAAGCGGCG
CGGCGGCGGAACAGATTGCGCAGGGCGGCGGCTGATCTATCAAGGGGGATGTCGTGCTCA
TCGGGTCATTCTGCTGTTGCTGCTCCTGGTTTCCGTCAAGCCACAGGAAGGAGAGGGGAG
GAGTCGAGGTCGCCGGTGCCCTACAGGGAGAGCCCGATGGCTTACGAGCCGGCAAAGTTT
TGCTGGTGCAATCCTCGTCGGAAGGCAGCAAGGTGGATCTCCTGGAGCATTCCTAACCCA
GGCAAGAGGTACTACGCATGCGTCGATGCCATGATGAGTTTTATTTTGATTGTGTTTCTC
TTATTTTCCCCCTCCCCATGATTCATTTCTATTACTACAAATGAACAGCATGGTGGTTGT
GGATTTGTTGAATGGCATGATGATCCATTGCCGAAGTTTTTGAGGGATCTGATTGGAGAT
CTGCGAGATGAAGTGCGTAGGCTGAGATGTGGAGGGAATGGTTCTAAGTTTGTTCCTCAG
TTTGAAGATGCCACTTCAATTGTGGCTGTGCCTGAAGCTCAAATTGATAGAGAGGTGTTG
GCTATGTCTCTGCAAGATCAACTGAAAGAGAAGAATGCAGAGATAGATGCACTGAAGAGG
AAATATCACAATGTTGTCTTTGTTTTTGCTGTCTTTGTGGTAGGTTTAGT