| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_244161
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_34557 |
1 |
3950 bp |
MLOC_34557.1 |
Available |
Available |
LOC_Os12g39660.1, FRAME:-2, EVALUE:0.0, 13112.m04120 protein calcium-transporting ATPase, plasma membrane-type, putative, expressed |
CDS Structure of MLOC_34557
Contig Sequence (7668 bp)
>contig_244161 7668 assembly3_WGSMorex_rbca.fasta
CCCTCCCGTCGTTTGATGCAGCCTACCAAACACAATCTCAGTTCAACATGCATCAATACA
TACACTGGTACCAAACAACTGCACTTGCATGTACTGAGCATGTTTATACTCAACATGTCT
CAAATGGGAACAACTAGCATAGGATGGGAACTGCTTCCAAACACACCCGTTAAGATTGAG
GGAGGGTGTTAGATTGTATAGTTCTCTGTATATATACGTGTATATTGTAACGTACCCTTG
GTACATCATCTATAAATATATGTGATAGGCCATCCCTAGAGGGTTGAGCCAGTTCCCCCA
AACCCTTCGTTTAACAGGTTGATCGATGGTAATATTGAACACAAATATTGTTGAAATATT
TAATGCTCACTTCTCACATTTTCTTTATATACTCTCCCCTTTTCTAAATATAAGTCTTTT
TAGAGTTCCACTAGGAGACCAAATACGGACGTATATAGGCATACTTTAGAGTGTAGATTC
ACCGATTTTGCTTTGTATGTAGTCTTTTAGTAAAATCTCTACAAAGACTTATATTTAAGA
ACGGAGGGAGTATCATGCATGTTGGTCAATCACAGAATACATTACCATACATTATCTCAA
ATCAATTTGGGACATTCTTACAAGAGTTCAAGAATTCCACGGTAAAGCACTTGAAATCCA
ACATGGTTCCAACATAGTAAGAAACTACTGTAGTTCTGTCTGGACTACATGCACTCCATT
CCTGGAAGGTCTCGGTCATATGCCGATACGGAATGAAGGGGTCGAAATGATCAGGTTTCT
GTTTATCGATCCGCAAAATATACATCTTTTCGGGGTCTGAATCCCAGCCAGACATCAATA
TTACAGGTGCCGACGAGCAGGCCCTAAGCCCTAGCACCAAGTACAAATGCTTCTTACACA
ACAATATGATGCAAATCTGCCACACTCGTAGGCTTTAAAACTTGTCTAGTGCAGCTCTTC
TCAGGCTTGCTCTCCATGCATCCCAAAAGACCCTGCATGGAGGATTCAGGTCCACACACT
ACGGAATCGGTCTTTTCGCCGCGCGTCCTTCGCATGGTGGGCTGCCCTTTTCATCAGGAG
GACCCAACAGGAATGAGCTTGACGACGACGGCGATCGGCATCCCGACGAGGCCAAGGAGC
ACGCTGGCGAGCCACTGGAGACTGGTGAGAGGCGTCGTGTTGGCAAACTCGCCGAGGAAC
TGGACCATGATGAACTGGAAGACGACCGTGCTGCTGAGGACACACATGAAGACATAGTTG
TTCAGAATGCCCTTGAGCACATTGAGCTTCTCCATCTCCCTCGAACTTATCTCATTGAAC
ACCTGAGAGATAGCATACGCAAATCTAGTGAGAATCCAAGTTCGCCATTAAAAATAATGT
GCAATCTGAATTCAGAGCTTTGACACAACAGGTTTGCATGTCGAACTATGCACCTTTGTT
TATTTACCTAACTATAAGAGCATTACACTATTGCATTTTTATTATTTAAAGTTCCCGGCA
TAGGGGTTCTTGAAATCATCACAAATTGTCTTCTTTTCTGTATGTTATCGCCAAGGTCCT
GGTAAACACATCACCAGTGGAAAAGAGAGGATTTACAGCAGTAGACATACCTGGCAGAAG
ACGAATGAGTTGAAAATAATTGTATTCAGCACTATATCAGCATCAGAGCCTTCAAGCCCA
AAAAAGGTTTTTCCTTGCGTCTGGAGATACCACATGACAACAAATTGGTATATAGATTGC
CCAAAAATGTTCCTCCACATTACATTTGTGATGAACTTCCCTGTTCTTCCTACTGGCTCT
CTCTTCATCAAGTCATCATTGGGTGGTTCGGTGGCTAATGCAAGCGCACCAAGTGTGTCC
ATAATCATGTTGACCCAAAGAAGTTGAACAGCCGTCAGTGGCGCATTTCCTATCATTGGA
AGTGCAAATTATCAATAAGAGAGTATGTTATAGGCAGTAACAAGGATCATCGAGACTAGG
AGGTATACCTGTAAAACAAGCTGAGGAGAAGTTAACAAGCAAGGCGACAACATTAACAGT
TAACTGAAACTGCACAAATTTTTGAATGTTGACGTAAACAGAGCGTCCCCATCTGGCAAC
AGTTACAATTGTAGAGAAGTTGTCGTCCAGAATGATGACATCGGCACTCTCTTTCGCCAC
CTGAATAAGTGTGCATTAGGGTAGTGAATAATATGAGTAACAAATTAAGAATACCAGGAT
ACAATGTCAACATTGCAATATTCAGGCCCTGAAAGGCTAAATAAATCTGCATAACTCCAT
TAAAGCAATACAGCATGATACATCTTCCTGTAGATTAATACAAGCATAGATTGTCTCGGT
CTCTTCAATGATCAAGCATTCTCACCTCAGTCCCAGCAATGCCCATTGCAAGTCCAATAT
CTGCTTCATGCAGAGCGGGAGCATCATTTGTGCCGTCACCAGTAACAGCAACAACTTCAT
TGAATGTTGTGCGTAAATGCTTTACAAGTGTATGCTTATCCAGGGGTGATGATCGGGCCA
TTACCTTCAATACACAGAATGACGAGATGAGACTTGCAGATAGATGGTAAGCACTATTAG
AAGTCAATAAGACATTATAAACACATCAAACCTGAATTTTTGGAACAAGCACAAGGAGTT
CCTCAAGAGTTTTCTCCCTGAAATCCGGTCCCTCAATAGCCAGACCATCTTCAGTGAGTA
TACCACATTCACGGGCAATCGCCTTTGCTGTATTTATGTTGTCGCCTGTGACCATTCTCA
CCGTAACTCCAGCAGAGCGGCAAATTGCAACAGACTCTCTCACACCTGGGCGAACAGGAT
CTTTAATACCTACAATAGCAATGCATGTGTACCCTTGCAGTGGTAATTGCTCTTCAATGG
AAAAACCTTCTTCCATTTCCCTGTAAGCAAGGCACAATGTCCTAAGAGCTTCATGAGCAA
AACCATCAATAATACCATTGAGCTTGCCAGCAGTTGCTTTATCAAGAGGGGTAACAGCAC
CTGTCTCATCTATGAACTTATCACATGCAGCCAAGACTATTTCTGAAGCACCTTTACAAT
GTGCACGGTATCCTCCTTCGGCAAGCTCAAGAAGGACACACATCCTCTTTTTTGTTGAAT
TGAAAGGCTCCACTTTCGCAATCTTAGTTTCAGCACGCTTTGCCTTAAAGTTTCCACCTA
TTGACATTGCAAACTCCAATATGGCTGTCTCTGTTGGGGTACCAAGGATCTGGTGTTTCC
CGTTTTGGTCAATAACAACCTCACCACCTGTATTGTTAAATATAGACTCGAGAAGAGTTC
TGACAACATTTTCTGGAAGTTCTGAACGCAACTTGGAGGCATTCTGAGGATTGTTAACCT
CTCTGATATTTCCACAAATGCAGGTCTTGACAACAGTCATATGATTAGTTGTTAGTGTTC
CTGTCTTATCACTGCAAATGGTAGTAGCTGAGCCCATAGTTTCACATGCAGCTAAGTTGC
GAACCAGTGCCTTGTCATTCATCATTTTCTTCATTGCAAATGCCAGACTCAGTGTGACTG
CTAAGGGCAATCCCTCAGGAACAGCAACCACAACAATGGTAACTGCAATAGCAAAATGCT
CCAACATCGCCAGTGCATCATCCCCTGACCAGCTTAAAAGCAGCCCATCGTGATACTTTT
TGCCGAGTAAACCTTGCGACAAGACAATGAAAGTTATGACAGCGAAAAATAGCCCGATCT
GACCAATGATAGTTGCCACTCCATTAAGTTTGACCTGCAGTGGGGTTTCATCATCCCCGC
CTTCGCTGAGAGTAGCCATTAGTTTTCCCCACTGGGTTCGCATACCAACTGTTGTAACAA
GCATCTTGCATGACCCATCTTGGACCTTGGTACCCGACAAAAGAAAAGGGTTTTCTTCAT
TTACCACAACAGGTTCACTCTCACCAGTTAGGCTGGACTCATTAATCAACAGAGAAAACC
CAGAAATGAAGAGCCCATCAGCAGGAACCTGATCTCCGATTGCCAGATTGACGACATCTC
CAGGAAGAAGATCATATATTGATATTCTTTGCCTGAAACCTTTCCTTGTAACGTGCACTT
GAATTTTTCTTTTCTCCTTGTCCAGGTCCTTGAATTGCAGCGACTGCCGATAGTCACTTG
TCGCGGTAACGAAAACGACCAAGAGGATACTTGCAACAATTCCTAGACCATCATGAGCAC
CTTTTGGCCATCCTTCCATCGTAATGCCAACAACTAACGAGACAAAGGCGCAGATAGCAA
GAATTATAAGAGTTGTATCTTGAAGAGCTTCCCACACAAACACCCAGAAACTGCGGATCT
CGCTTTCTGTGAATTTGTTTATTCCATATATGTCCTGCCTACGCTGCATGCTGTCCTCAG
CTGTATCCAGCCCATCCGTCGGGGATGTTGCAAGCTTCGCTGCTATTCCAGCAACTGCAC
CATGGGTGAGCAATTTTTTACTGTCATGGCCCTCAACAATGGACCCCAGCTCATCAGCGC
AAATCTGGAACCCTGCCGCCTTGACTTCTTCAGGGACAACATATTCATTTCGAAGTTTGA
GACCTGGGGATATTTGTTTGTCAGTGGCACAGTTAGACACTACATAGGAAATGTTCAAAA
CTACCGAGAAAACATGAATTCGTGCTTACCATGTATAAACTGCAGTGCAGCTTTCGACAC
CAGCACGGCAACCCGCAGCTTCTCCTGTCACACATCAATAACATGAATTTCAGTAACCTC
TTAAAATAAGCACAGAAAAGATATGCAAAACGAGGGCAGCAGCAATAGCAACCAATATTT
CCTAATAATTATATAAACCACTCAAGGATCGAATTTGGTGCTGTGATTGATTATTCTTCT
AGAATGGGATTTCAAACTAGCCAGTCCCAACACCCATTATGGCCGTGCACTAGGAATCTA
GGATAGCGCCGTTCTACTGATAAAACAGTGCAAAGAAGTCATATGCTGTCATTGCAGCAA
ACCAGGCAGCGGCAGGTACCAAATTGGCACTGGCTCTGGCCCCGGCCCACCGATCTCACG
AGCAGATCACATACAACCCCAAAATGCTCCAACAAAACACCGTAGAACTGGTTAATTCAG
TTGAGAACTCCACTCAGCGTGCAGGTAAACTAGCCGGCTACTGGGCCACGATCGCAGCAA
CCCTAACTAAGCAAAGCAAAGCTAACCTAAGGTAGCAGCAGCACTATCAGTACTCGAAGC
TACATCTTGGCCGAGGATGCGGCCGGCCGGCGTGAATCCCTACGAGCTCCGGCCACGGCG
GCCAAGCCGGCCCAGCAGCTCCAGCCCCCAGATCCCAGAGCCGCCGCAGATCCCGGCGAG
AAACCCCGCCGGGCGAGGCCGCGCAGAGGACCAAACTAGTTAACCGCAGGGAGCGGAAGC
CAGCAGCGGAAGAGGGAGGGAGAGGGGGAGAGGGAGAGAGGGAGGTGTGTACGTGGTTGG
CGTGCTTGATGGCCTGCGCCTCGCCGCGCTTGTCGAGGTTGGCGGTGAAGCGGAAGCGGC
GCTTGGGGTTCTTGACGACGCTGCAGAGCTTGCGCCAGCGCCGCAGCGCCTCCTCGGACG
AGTTCTTGCCCTTGACGCCCCCGAAGTTCTCCTCCAGGTACTCTCCATCCCCACCTCCCT
CCCTCCCTCGCCCGCCGGCGGACTCCTCGCTCCCTCGCCGGGCTAAAATAAATAAATATC
CCCGCCCCGGCGCGCACGAGCCGGCCGGGATTGACGCGCTGGTTGGGTTGGTTTGCGGGG
AGGATGGGGAGTGTGTGTGCGGGCGCTGCGGGTGTGGCGACCTGAGCCTGGCCAATGAGA
TGGCTCGCGCGCTCGCTCGCTCGCGGAGTCGTCGGGTCAAACGAGCAGAGCGCCCGAAGT
CACTGCTGCCGGAGCGCGCTCGGGTCTCCGGCCAAGTATACGTACTCTACCGGGAGAGAA
ATCTTTTGCATTTTTTTGCTAGAGGAAAATCTTTTTAATTAACGTCACTAACGCTTTTCT
TTTTCCCGGCAACGTCACTAGCGCATTTTCTTGGTACACTTGTAACGGATATAGCGAAAA
CGAAGATACGGGGAAGGTGCGTCTTTAGAGGCGCCCGTATATACCGCGTATATATAAATT
AATAATTAATACGTGTGTATAAATGCGTGCGACATAGCGTAGAGATAGATACGTATCTCA
TTTATACCATAAAGTTTATAATATAAGTTATGCGTACACCAGCGTAATAAAACTGAATAA
AATAATCCATACAAAAGAAAAAGAAAATAATAACAAAACGCTACTCTTTGAGCCAAGGAA
CGCTAACCAAAAAGAAAAATGACAATTAAGATCGAAGAATCACGTGACCTTAACACAACA
CCCGTCATCTGCCTTCCGCATCATCGTAATAGACACCAAAGGGTCAAGAGCTCAACCAAG
GTCGATACGTTAACATGTAACTCTTGTGTTGTAACTTGCCTTGCCTTTACTCCTAAATTG
TAGGATCTATAACGACTCCATGGGTCTGCGTGCCTTCTTCCTCAGGACGTCCACTTCTCT
CTCTCTCGAGTATATATATGTAACAGATGTATGTAAACCAGTGTGAAAGAAATATTGTTC
TCCAACTTGCTATCAATTTCCACGCGCCCTCCCAATGGACTTCGGTCTCCCTCCCACCTC
CGACGCCTCCGACCTCCCTGCCTCCTCGGCCAACCCTCCCGTCACCGCTCTTGTCGTCGC
CGCTGGTTCCTCCCCCTTTGTCTTCGGCTCACCTCCTCCCGCATCTCAATTTGCGCCCCT
CTTCTCCTTCGTCGCGTCGCCACCCCCACCCCTCCCGACCACCGCGTCGTTGCCCACACC
ACTGTCGGCTGCCCAACCTCCTCGCCACCCCATCTTCCATGACAGCATCAAGAACCACAT
CAAATTTCTCCTCCATCCTGACGACCACAACTACCACAAGTGGGAGTCCTTCTTCCTCAT
CGTCCTCCTTCGCTCCGATGTCACCCACTTCATCGAGCAACCTCTCCCTCCAAACGCCGA
TGCCTACCTCGTCCTTTGGATCTACTCCACCCTAGTTGATCCGCTCATCGACCATGCCGT
CGGCGCTCTACCTACGATCTCTTGGCACGCATTCGTGATTACTTCCTCGCCAATCGCGCT
GCTCGCTACATGACTCTCAACCGGAAATATCGCAATCTGAAACAGGGGACCTTTCCGTCT
CGGAATATGCTCGTCGCATGAAGCGCCTCATCGCCGACATCGACTACCCTGTCACCGAGG
TGGATCTCACCACCCAGTTCCTCCACGGTATCGACAAACGGCTCGACACCATCCGAGTCA
TCCTCGGCGACACGGTCCCACTCCCGCCATTCGGGACCGTCTTCTCCCACCTCAAGCTCG
CCGAGGAAAACCTAGAGCAATGTGTGGCCGACGACAGCGCCACCATTCTTGCCATCACCG
GTGCTCCCTCCAGACCCAGCGGCCCCTTCTCTTGCTCATCCATTCTTGGCGACCCGTCTA
CCTCCTGCCATGGCGACTGCGTTGACCGCTCCAACAACCGCGGGCACGGGCCTCCATCGG
GTCACGACTACGGCAATTGCTACCTCTTGAGCTTGCGNNNNNNNNNNNNNNNNNNNNAAA
GGGTGATGCAGTGAAGTAGATAAATATTTCCCTTAGTTTGTTGAGAAC
