morexGenes - Barley RNA-seq Database

Contig contig_244082
Source Contig contig_244082
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_244082 (5795 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_244082

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_34513	2	2231 bp	MLOC_34513.2	Available	Available	LOC_Os03g38800.1, FRAME:-1, EVALUE:0.0, 13103.m04212 protein AAA family ATPase, putative, expressed
CDS Structure of MLOC_34513

Contig Sequence (5795 bp)

>contig_244082 5795 assembly3_WGSMorex_rbca.fasta
ATGTAAAACCCTACCGCCTGCTTGATTATATTGATGGGGAACGATGATTAAAGAGTCAAT
GTACCTCAAGATCGTATGAGCTAAACCCTAGATAAGATAACTTGCGTGTACGCATAAAAA
CCTCTCGTTTATATAGACACGAGGGTTTCTAGGGTTACATATTACCGACCTCAGCCGGGG
ACAGATGGGACGACCTGGTCTTCTTGATTTGGAGTACACGTGAGTCTTCGGAGCATTTCA
TCTTGATCATAAAGTTGTTAGACAATCTGTTATTCCATGAGACGGCCCATAATGAATAAG
CCGACCGCCCGAGGATTCCTTAATGGAGGACTCCCTCACTCCTTACTCTCTTTCCCGTTC
CCCGGAATGTTTCTAAGACTGGTGTATTTTTGTTCAAGTAATGGAAAGGAGGTTAGCCTG
GTTCAAAAACTAAATAGAAAGAGTATTTTAGATCATTTGGAGGAGGTGATGTAAATTCTT
GTACATCTACATTATCTATTGAACCTGCGTTTTTAAGCCTTTGTAATGTAAAAGTTAGTT
ATTTTTATTTTTACATCTTATATTGGAGATGCTCTTAAATCAGTCATCTCACTCATGGCC
AGGCCCAGTCTAACCCAACTAAAAAGAAGACCCGCTAAGGATCTATTTGAATTGCTTCTT
CGAATACCAAATACTTCCTCCATCCCAAAATAACTGTCTTAACTTTATACTGGTTCTAGT
ATAAAATTATATTAAAATTGAGACATTTATTTTGGAATGGAAGGAGTACTAAATCATGCA
TCAAGCTATTTGCACCAATGATTACATAGTACCAGCATAACATTGATCTAAAGATCATGT
GCACCAATGATGCTATACATTGATCTAAAGACTAGTTGCAGCAATGTGTTCGATCACGAG
ACATTTGCAAAACAAATGCATTAGTTCAATCGGCTTATTCCAAGACTAGCTAGCAAGTTC
TTGATGTGAGCTGTAATCGAGCTACGTCCCTGGATCATACTCTCCGTGCTGAGTTCCCTG
GATCATACTCTCCCTGTTTAGTTCCCTTCATGCACGTCCTCCATCTTACTCTGTCCCTGC
TTCTTCTCTTTGAGGAACTCCGTGAGACCCCGGAGCGCAACGTCTGGCTCATTGGTCCTC
AACAGCATCTCGGACACCTCCGCCGGGGTCACCTGCACCGCCATAAGCAGTTCCTGTATC
TCCGGGAAGAGGGGGTGGTCGTCGACGAGGAAGTAGTTCCGGGCCAGAGTCTTGAATGCC
TCCCAGCAGCAGTAGCCCATGTAGACGTGCATGTCCATGCGCCCCGGCCGCAGCAGCGCC
GGGTCAAGGCGGTCCTTGTAGTTGGTGGTGAAGACGATGAGGCGCTCCTCGCCACTGGTC
GACCAGAGCCCGTCGATGAAGTTGAGCAGACCCGAAAGCGTGATCTGAGTTCGCCGTACG
CAGAAGTGAACATATGGACATCAAGATAGGTAGTGGTAGTAATATGTTCACACAGCAATG
CAGATACAGGGGAAACGTCAGTAGTTACCTCCGATTTGCGCTTCGGCGACAGCGTACTGT
ACGAAATTTCTGATGAGCCGCCGCCGTCTTCTTTGCGAGTCCGCCCTTGCGTCTTCTTCT
CCTTGCTGTCCACTTCCCTTAGCATGGCATCGCAGCAGCAATCGATGTCTTCGATGACAA
GAATGGACTTGTCGGACATGGTGACGAGCAGCCACTGCAGCGTTGTGTTTTGCACGTGGT
TGAGGTCGAGGTCGTAGATGTTGTACCGGAGGTGGTTGGCCATGGCCGCCACCAGGCTGG
ACTTGCCGGTGCCGGGCGGGCCGTACAGAAGGTACCCGCGCTTCCACGCCTTGCCAATCC
GGCGGTAGTGGTCCCTCCTGTTGGCGAACAGGTCGAGGTCGGCGACGATGGAGTGCTTGA
GCACCGGGTCCATGGCGAGCGTGTCGAAGGTGGCGGGGTGGTGGTGATTCAGCCTGAACC
ATGTTCGGCCCTCGTTCATGCATATCATGAGCGAGCGCTCCCGCAGCCTCGTCTCCTCGG
CCGCCCCCATGACGAAGGGCACGTACCTCTCCATCGCCATGTCCGTGTGCTTGGCGTCGA
AGCTGAGCTTCAGCAGGAACTCGGTGGTACCGGACTCCCCGTTCTTGGACTTCTTGCTTC
CTCCCACGCTGCCGTTTGTCTTGTGGACGGACGACCACATGAACTCGACGCCGTCGAAGA
CATCGATGGTGGAGTCCCCAGGCTCAATGAAGAGGCGCTTGGTCCAGCTTCTGAGGCCGC
CATCGTCCCTGGTGGCGCACAGCTTGAGCTCGAGACGGCGCATGGCGCGCGGGTCGAGCC
TGGAGGACAGGTACGTCCGCGCTGCGTCGAAGAGAAGATTCTCCTCGCGACCGCCGCCGC
TGGTGTGGCTCCGGATGACGAACGTCCGGCGCTCCTTGGCGCCCCAGCCGAGGCGCGCGC
GGAGCATGGACGCGCCCCAGCGCACGGCGGCGCGCAGCTCGTCCGGGAGGAGTTCACGCG
CCATGCTCCGCGCCAGTACGGCGTACGCGGCCGCCGAGGCCGCTGAGCTGAGCGCCATCC
GGTACGCGTCCGCCGCCTTTCCGCCATAGGCGCCCGCGCTGGCTGGTGAGAGATCCATCA
GTGCCGTGGCCGGTGGTGGGAGTGGTTTCATGGTTTTACGTTGGGTTTGAAGATTTGAAG
TTGAGCTGAGCCGGTGAGGTTGGTTTGTTTTTGACGGTTGCGCGCATGAAGACTCAAGAA
GAAGCTGGGCGTGGATGAGACGATGATAGTACTACTCCAGTAGATGCAGTAATTGGCGGT
GGTTGCCAAGTGTACGCAGAGGTAGGACTGAAGAGTGGTCAAACTTGGTCGTGGATTAGA
CGATCAGTTGTGGAAAAGGCAAGCCCTTGGCTTGACCATGGACCAGAGCCTTGGTGCTTT
GGTGGGTTGGGTGCGAGACGATCAGCTCCAACAAGGAACGAGGAAGAGGAGCTGGCCCGG
TTTCTTGGTGGGGAGGAAAGGCGAAGCAGATCCGATTCCTCCGTCCGGCTCCAGGAGCGT
CATCGCGGTCGTCGCTGATACGGAGGCCGCTGAGAGCATTGACTGTCCGTCCGTCCGTCC
GGTCAGCCAACCTGCTAGGCCTATGTCCGCTACTGCGGTCTAGGCCTTGACCAGATACGC
TCCTAGTACAGCTCAGCAGGTGGCGTGCCGGGTGGCCATTGTGCGAGGTGACTGTTCGGG
GAGGTAGTTTTTGAAATCAACAAGTCATACGAGTGATATACTTCTTCCGTTCAAAATAAG
GCTGAGTTTTGACCGTTGTTTTTCTACCACCCTTTTAACATTTTACACTTGTATTATATC
AGCCTACAACGAAATACATGCCACAGGATTGTATTTCCATTCCGCTTCCCAGCCTCCGCT
TGAAATGATGTTTTTCTCCCCTTGTAACCAGGTTGCCATAGTCCAGACTTTCAGAAACAC
AAACTTTCAACAACAACAGACTTTCAACAACACAGAGTGCACTTTTAACAACATAAATTT
TCAAATACACATATACAGACTTGAAAACAACACACAATGCGCTTCCACACATATTGCAAA
GGTATAAATGAACTAATTATTTTATTTATGTAACCGTACCACAACATAAAAAAAGATAAT
ATTTTTGCATTCATCCATTTGAACATAGTTCTGATAACTCATAGTGCTCAAAATCAACAA
TTTAAATTACAAATTTATTGAGGCATACTTGTCTCGTCTCGTCCCCTGCTACATAACCAA
AGTTAGGACTCGGTAATTGTTGAATCATTGTGCATTTAGACATAAAGTATTTCATGAAAA
TTAATCCTCGACAATTGTTCAAGTAGTGAGGCAGCATCAGGGCAGAAGAGTAATCCTTGA
AAACAAGACATATCTGATCAGGCTAGCAAAGAGCATCTGGATAAGTAATAGGAGCAACAT
GTGCATAAGTAACAAGAGGAGACTTATCAAGAGCAGGCTTGTCATGATTCAAGATAGCTA
TCAATCATAAGACTAGAGCAAATGAAATGACAGAACATGATAAAACATAGCATGCCCAAA
ATCGCAAATTTGGCATCTGTTGCGTGCTGCAATTTGATTCAATCTGGTTGTACAACCAGT
AACATGTAAATTAGCATTACAAGGATATTAGGAGCCACCTAGAAACTAATTAAATGCAGA
TACTAGCAGCAGCAAACTGCTCTGACCGGACTAAAATTAAGTCATAAGTGTGCATATTAA
TAAACTAACTATAAAGCATTCTGTTTCGATGATCAACAATCCATGGGATAACTAACATGC
ATGTAGGAAGCGCGGTTATTGAGCTGCTTGCTGAACAAATATGATTATAGCAAAGCCTAG
ATTCGATTCAGATGCCTAGATTAAAATCTCAATTTCGACATTCACTACACATGCTGCAAT
TTGATTCGATTCGATTCATCCATCCCACTACTAAGATGCAGATCAACATTACTTTAGATA
GATGTAGTCATCCAAAAGTTGTCTGCACATACATATATACTAGCAGTAGCAAACTAATCT
GACCGAACTGAACTTAAACATAAGTCTCCCTAGGTGAACTAATGCCTAGATGAACTAACT
AGAGATCATATATAGACGAACTAACTAATGCCAATTGCATATGCACGTAAGTTCGGATCG
ATATAATGAATCTGTTTCAAGACCCAAGTAGCACCGACATTAGCATTGTCTCATAAACGT
TGCTGTATTTTTTCCCTTCGCGCTGATGGAGAGACAGATGAGGTCTATGCACAAATGACG
TTACAACCACTCAACCTAGTAATACAGGATTTCCAATCTAGTGCCATCTATCCATGAACT
TCTGTTTGCAGCAAACTTATATTTTATCTTGATTTTGTTTCCAGCAAGAACTCAAGGAGA
AAAAAATTATATACACGATGATGAGCTAGCTAGTGAGATGTTGTAATGAATCTTTGAGAG
GAGAGGGAGCAAGGACAATACCTATGATCAGAGCACCNNATTGATTGAAGGAATATCGCC
AGGTGAAAACCGAGCTGCAAAGGAATACTCGCTCAAATAAGCCTTGCAAACTTATCTTTA
GTTGGGAGAATAAATACAGAAAACCAAGATTTATGGGACTTGCAAGGAGGAGGCTCAGGA
CTAATCTTGTCGACTTCCTTCTTTAACCACATACCCCACAGTCTTGAGTTGTAACCCAGG
AAAATCTCACGGTTTGCTACGTCTTTGAAAATATCAGAGGCAAAGATTTTCACCTCGTCG
GGCACATCTTCCATGTCATGCAAGATCTCCAATCATTGTATAATTGAGGGTTGTTTTCCT
TGTTGTGACACTCTCTCCTTCTTCGCAGTTTGCTCTTTCTTGAAATTCACATACGGCATC
ATTGAATCTTCAAGGCGTTGTACAAATGTGGCACTTTTCTGTTTTTGGGTTTCCTCCCTT
TGGCACTTGATTCACTTATTTGTGGTTGATCTCCATCAGCATCTTCACTGCCAAATTCTT
CCTCGTCACGAACCGTGTTTTCTCTTTCATCCACATCATCCAATGCAGGAGCATCATTGA
TGTTAATTATCGAAGGAGTCCTCATGCTATCATCGCTTTGATCTCTTGTATTTTTCTTGG
TGGTGCTCGCAACCATCTTCTCCTTTGCTCCAAAGTTGCTACCTGAATTTGTGACAATCG
GAGGCTTCCTTGATGTGAGACAATGCCTTCCTTGAGCAATNNNNNNNNNNNNNNNNNNNN
CCAATGCCTCATACAAGGGGAAACTTTTTCCTTCA