| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_244038
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_34493 |
1 |
923 bp |
MLOC_34493.1 |
Available |
Available |
LOC_Os07g12080.1, FRAME:+1, EVALUE:2e-25, 13107.m01242 protein LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
CDS Structure of MLOC_34493
Contig Sequence (7095 bp)
>contig_244038 7095 assembly3_WGSMorex_rbca.fasta
ACATCATCCTTGTTGCGACAAGTCGAGTTTTTCTTAATGGTGATGTTTCACCATCAACGT
TTGTCTTCCTTATAAATACCCATCTTTACTTAATAGTCCTACGACCACCAAGTAGTTCTT
CCAAAGTTTAATTTGTATAAATCCGTTTGACGTTGCCACGGGCTGTTAAGATGTGTTTGC
GTGATTGAGCCACTTTTAGTAATTGTACTCTCTCCATATAATAAATTAGTCGCATTTTGG
ACATGTCTTCACTCAAACCAGTATATATTTGACTATGAATATCTTTAGTTATTCAGACTG
GAAATTTGAAAAATCATTTGTTTGTATTTAAGTTAGGTAAAAGCAGTTTTATAATCTTAT
AATACTTTTCTTGGTTTATACTACAACATAAATTCGTGGTCAAGGTTACATCTCAACCCC
CTGCAAAATAATTTTTTTTACATCTCATTATCTCAACAACCATTTCGTTGTTCAAATATC
ACTTCTTTGTGATATGGATGGAGTGGTTATTGGAACACATGTTTTGTCCTGTTCAGATTA
TATTCACCCCTCCTATAAACATACTTATCGATACTACATCGCTCCATAACCCAAAGGGAT
TACATGTGCATGCATCCTTGGCCAAATTAGAAGCCAAGACCAGGGAGTGATGAGCACCTA
TTTAGATATAAAACCCAAGAATGAATCACTTCCATGATTTTACTATTTCTCACATCGTAA
ATATTTCTCGTTCGCTACACAATTCTACATAAGTGAGCAGGGTATATAGTTTTAGAAGTA
CCGAAACACAACATCGACACACAAATCGTATATTCTTATTTAAAAAAATCCATTTAACTA
ATTCACCCGAAGGAATTGTTCTCTAGAAGAGCTTCTAAAATTAAATTTAACAAATTAATG
TTCCCCATGAAAAAGCCTTTTTTCTTTATATATGTTTTACCACATGTTTTTGTGTGTAGA
ATAATACATTCATGCATATGAAAGAAAATGTTTTCATTAACATGAATCGCCATGGTCATG
TGCCAAATAAAACACATTGTCATATAAATATATCATATATAGAAGAATATTCCTTCGGGT
ATTTTTAACCTATGAAATTTGTTGATGGGTCTCAAATAGAAAATTCACTCAATAAATCCG
CATAAAAAATTTGTTCTTTCTTAAAAATATATATCATCATCCGTTATAATACATTTATGA
TTCAAGGGGAAATATTTTCGCATGTCACTAGAAATGTTTTATATTACACAAGCGAACAAA
GATGATAAACTCCATCGTGTTAACTATTTTTTCTGTGAAACAAAAGTTAACAATCAAAAC
AAAAATATAGACTATGAAGTGTGAACAAAAAATATGTTATTTTCTAGAATTTGAAAAATA
AGATGGGATATGTATTGGTGAAACACATGAAGACCAGGACAAAAGAAGAAGGGAAATGAG
AAGGAAAAAGGGGAAACGTTATCCAAAAAAAACAAAAAGTAAACTAGACGTGTCGAAGGG
AAACAGAGTTTGCATGGGCATTCCAAATTCAGTTGCAAGAACCTTCAAATAAACGCCAAC
AAGAAATATCTTCTGGCATCTTGTTTGCCCAAAAATGAGGTTAAAAAGTTTGGTTAGCCA
TACTATCGTTATATTTTTGTGGCCTCTCCACACCTCAATGAGGATACAATCAGGGCCCAT
CACCTTACCTGCTTTCATCCTTTTTAATGTCTCATTCACTGCCGACTCCTGGATTCGCCG
CGCAAAACGCCTGCTAGTATTATCAAAGGAGTCGTCCAGTTCAATGACAGAGCTCTTACT
CTCCCCATTGAACAACTTGTCAAAATACTCTCGCCATCTATGCTTAGGGCCTGTTTGGGA
CTGCTTCACTTCACCAAAATCAACTTCACTTCATTAAATTTATTTTTGAGTAGTTTCATA
CAAAAGTTACAGCACTATTAAGAAAATGTTTGGTTCCATCTAGCTCCAGCTTTAAGAATA
GAAAACTTGGTGGAAAGAATCTATTTGATTGGTTGAGAGGGGATAAATGAAGGGGTATCC
ACTTACTGGTGGCAGTGGTGGGTAATTTTCCTCCAACTCTAGTTTCAAGAGTTTTATGAA
GCACCCTCTAAAGAGCTTCATAAAATCTCTGGAGTTGTACCCCAGATTCTAGTTTTTCTA
TGAAGCGGCACATCGTGGAGCTACCCCGTTTGGCTTGTGTTTTTTGAAGTGGAGCTGAAT
TTTAAGAAGGAGAGCAGTCCCAAACAAATTCTTAATCGGCCCGTTCTTTACGAGGAGCTG
ATCCGCTCCATCCTTGATGCATTTGATTTTGTCAACATGAATATGAAAGAAAATAATATA
TTCATGCATATGAAAGAAAATGTTTCTATGAATATGAATCACCATGGTCATGTGCCAAAT
AAAACACATCGTCATATAAACATATTATATACAAAAGAATATTCCTTCAGATATATTTAT
CCTATGACATTTGTTGATGGAAAAAATTCTCGCAGGTTCTTTCTTGCGAAATACCCAAAT
CTACTATAGAGGTTCATGGGAAGTACAAAGTAGTTCACGTGAGTTCGGGAATTCAATTCG
GCTCCCGGGCTCAAAAATAATTTTTCAAATGTCAAGAATATCAAAACAAAAAATTTATGT
GTTCTTAGTCACATCCAAATGCTACCTGCAAGTTTTGACGCAAAAAAGTTAAACATTTCG
GCTTGTGCAAAATAAAATAAAATTGAACACCAAATGTTATCATAAATTTGTTTTTTCACC
GACAAAATATTGCTCCTCCATTTCGCATTAAAATTGTCAAGCATGCTTGCAACAGTAACA
CGAACATTCATAAAAAAAATATTTTTTAAGAAAACATTTACTATTTTTTTGTTACTATTC
ATCTGGGAGCATGTGCTTCCGGAAGCCAAAATGCCCCTTCCAATATGCCCCATGTAAAAG
AAACCCCTTCTTTCCTAAAAATATATATCATCGTCCGTTATGATACGTTTATGTATTCAA
CGAAAAATATTTTCGCATGTCACCAAAAATGTTTTATATTACACAAGTGAACAAATATGA
TAAACTCCCTCGTGTTAACTATTTTTTCTGTGAAATAAAAGGATGACAATCAAAACAAAA
ATGTAGACTGTAAACAAAGAAAACATTATTTCCTAGAAATAAAAAAAAAGATTAATGGGA
TATGTATTGTTGAAACACATGAAGACTAGAACAAAAGAAAAAGGGAAATGAGAAGGAAAA
AAGGGGTAAACATTACCCAAAGAAAACAGAAAGTAAACTAGACGTGTCGAAGGGAAACGG
AGTTTGCAGGGGCGTTCCAAATTCAGTTGCAAGAACCTCCAAATAAACGCCAACAAGAAA
GAAATGAGCATTACTTGCGCGCTTTGCACTCTTATCTCTAGCATCTCTCGATACATACAT
ACATGTAGCCTAGCTGCAGATCTTGAATAGCTATTCTTGCCCACCAGGCCAAGAGATTGA
ACCAACGACCAATAAACTAGTATCAACAATGGCATCCGACCGTCGTCGCTTCCTCCTCTC
CGGCGCCGTCTTGCTCTCGGTCCTCGCCGTCGCCGCCGCCGCCCTGGAGAGCGTCAAGGA
CGAGTGCCAACCAGGGGTGGACTTCCCGCACAACCCGTTAGCCACCTGCCACACCTACGT
GATAAAACGGGTCTGCGGCCGCGGTCCCAGCCGGCCCATGCTGGTGAAGGAGCGGTGCTG
CCGGGAGCTGGCGGCCGTCCCGGATCACTGCCGGTGCGAGGCGCTGCGCATCCTCATGGA
CGGGGTGCGCACGCCGGAGGGCCGCGTGGTTGAGGGACGGCTCGGTGACAGGCGTGACTG
CCCGAGGGAGGAGCAGAGGACGTTCGCCGCCACGCTTGTCACGGCGGCGGAGTGCAACCT
ATCGTCCGTCCAGGAGCCGGGAGTACGCTTGGTGCTACTGGCAGATGGATGACGATCGAA
ATGCGCCAAGGTAATGAAGCGGAGTACTGTATACAGAATAAAAGTACTCGAGTGAAAACA
AACTCATAAATAAACCTTGTGAGATGTATGCGTATGATCTATGGTGTGGACAGTTAAATT
GTGGCCGGTTGATGAATAAAAAAGGTTGGAACAAATTAAATTGTTGTGGGTTCATGTACT
GTACATACATTGCTGTGGAAATTATAGATTCAGTCGCCACAAACCACTCCGAACCTACTA
AGCACCGATACAACGACATTGATACGGTGATATGGGATATAACAATTTTTAGAAATAACA
ATATGACGATACGATAAGCATATATAAATAATAATAAAATAATATATAATAAAAACTAGT
TAACATAATAGAATGTATGAGATGAAGTCAAAATACCGCATCACTGCTTGCCTAATTGAT
TCCATACCTTCTTGTTAATCATTTTAAAAATCGCACTATCATCAATGAGGTAACACGTCC
AATCGGTCATAGACTGTCCAATCTAATTTGAATTGTAATACATATTAACGTGACAACATA
AAATCAACAGACCTTTAAGAGTTAAAAACTTGAGATTGTCAAATGGTAAACATATATAAA
AAGAAACCTTAGATTGCACGAGTGGATCAAATAATGGAGGGGGTACTACTCTTCTTCTAA
CGTTTTAAAAGTTTTTTCTTCATAACGATATAGAGACCGCAATCTTCATTAAGCTTCTTA
TTCTCATAAAAATAAATATATAGAAACTCTCACCTATGAACATGACGATAATTAAAACCA
GCAAGCAATACACATCAATAATGCTCAAATGATGATGGAGAAAGTTAAAAGATGCCATGA
TTTATACTTGTATCTTCTTCCCTAGCAATAGGAGGCAACAACAACATCATCAAGTAATTT
TACGTCACAAAAATCAACAAACAGCAATCCAATAGCATCAACAAGCAATTTTATCCAACA
AACAATATCCTTAGCAAGCACTTTTATCCAAGTACTACATCAGTACAGTACACGTACACT
ATCTATATGAACAGATCACCGATACATCAAGTCATGAGCAATACTCAACGACGATACTTC
AAGGATACCCATATGCCATTTTTTCATTTATTTTTAAATTAAAAAGGCGATATTTCAAGG
ATACTCGTATTGAAATCTGGTGTATCGAAGTATCAGCGAAGTACTGAACGGCGATACACA
GATTTCTGAAGTATCGGTGCTTCGTAGCTCCGAACCATCGTCACCATGATTCTGTTATGG
GCTTTGCTACATCTAGGAATGACTATGTCAGCACGCTACATAAAAGTTGTTTGCAGGTGT
AGCACTTTCGGTATGCGTTTACTGATTAACATATTGAATCCTTTAACTCTTATATGTAAG
TAAGATTTATATAACTCTCATCAGGTGTCCACATCATCCATATTCAGTTTGTTTTTACTG
CAGGTTAGAGCGTCGTCATGAATTTTTCGCACTGGATACTTTCTGTTTCTGTGTTGGGTC
GTTTGAGCTTTCTCTGTTTTCATTCCTTTTTAGGCAGCTGGTCCATTTGGGTTTCATGTC
TATTGGGCTGAGGTGTTTTATTTATGTACAGAGATAGTAGCTGGGAACGTATTAGCCACA
AATATGTGAGGGGAGAGAACGAGAGAGAAAATAATGGCAAGAGAGCGGTAATCTTCAGTA
ATGTGGGCTATACCGAAAATAGCTTTCGCCCCGCTTTATATATAAAGCAACAGGACAGAA
TCGATACAAAGTGATGAGAAAAACCTCTTACAAAACAGATCAAAGATAAAACAAGATTAT
AAGAGTGCCCAAACTCCATCCAGACACACCCGAGGCTACTAACTAGAAGAGAGACAGTGC
CTCCAAAAGAAACCACCGGACGTCGATGCAGCACACACACCAAGTTGTCGCTGGAGAGGG
CACCCCTGCCCTCTCGCTCCGTACCGTGGAACACCGATCCTACCCGTAGACAACATGGCC
CGAGTGTGATGCCCACGACGTCACGTATAAAAGATAGGAAGGCCACAAGACCGCCTCAAG
CCAGAGCCGAAGGAGCTTCGAGATAGGATCCGAGCTCGCCAGCCGATGTCAAAGAAACGT
AACCGGAAGGCACATAGGCTCCACGACAACGCCCTCAAGAGAGTAACGACGCAATACGCC
GCCGTCGTCGAGACCGAAAATACGGTCAAGGGTTTTCATCCGGAGCCCCGACGTGGGTGA
CATCCCACAATGACGCCCTCAAGAGGGACACGACACCCACGGGCATCGCCCTCGTCGACG
CCGGAACGTTAAGCTTTCACCCGGAGACTCCCTCGCGCCAAAGTACCACGACCCAGGTAA
TATGGGCTATACAGAGCAACAAAAATAAATATACTCATTACAACTAAAAAAGTTTACTCA
TGAGGAGATATACAAGGTGCTTACAATTTGAAGCTCGTGCTGCATCAAAGTATCGCCAAA
ACACATAGGCAAAGCGAGTGAGTTAGATAGATGGTCCGACCCAATTTAGGGTCCCTATAT
TCATCACACGTGCGGTATATTAGACATCCACCAACACACGGTGTATGGCGTACGCAGAAG
GCAGATTATATGGTTGTGTGTGGGCGAATACTAGAACTAGCCACACGTGTGGACGCAGCT
ACTTTGTGTCACATGCCCAACAAGTACTACTCATCCCCATTCGCGCGTGTGGCACGAAAC
AAATCTGTCCACATGTCCTGACGCAACTACATTAGTTATCCGTGGTACGACACTTTACTT
ACCCCGTGGATGGCAAATCTAGTTACCCGGGATGGCTACTACAACTATATCTGGCCACGG
GCAGCCCGGCCCGAACCGGCCCAACCCGACCTTGCCCACGGGCCGGGCTCGGGCCTGATA
ATCAAACCCGGCGGTTGGTCCGGGCCCGGGCCCGGTTTCGTGAAAACCTGATTTTACGCC
TACGTCGGGCCGGGCTTCTTCGGACCGGGCATGGGTCCAAAAATTAGGCCTGATGGTCAG
GTCGGGCCAGGCTCGGGCCTGGGTTTTGTACCATGGTTTTTTTTAGGTCCGGCCCGAGGC
CCGGCCCGACCCGAGATATGGCAAGGTATAACTACAACTATAAAAGCATGGCAACTCTCT
CTCTCTCTCTCTCTC
