Contig Data
morexGenes
Links



Map Locations of contig_244014 (5625 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_244014

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34485 10 1777 bp AK357120 Available Available None
MLOC_34486 3 2863 bp None Available Available LOC_Os03g20380.7, FRAME:-3, EVALUE:2e-115, 13103.m02445 protein CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed





CDS Structure of MLOC_34485






CDS Structure of MLOC_34486






Contig Sequence (5625 bp)

>contig_244014 5625 assembly3_WGSMorex_rbca.fasta
GGGATGACCGCCTGTGTGCGGTGGGCGAGGCGGGGGGGGGGGGAGCCGATGATGGTGACG
TGCGCGCGACGCTTATCTTCCGGCGGGTTGACCATTTCGTGACGGCGACGCCTCGTCGCG
GTCTAGGTTTTATTTTATTTCCCGGATCGCGTCCGCTGTTGCTTCTAGAGCAGCTTCGTC
TGAACGGGTCGTCGTTGTTGACCGTGGACTGTCGCTGTGTAGCAGTAGACTGGTCTTCAT
CGCACTTTTGTCGATTTATTAGGTAGCTTAATTCATGTCGAGATCCCTGGAGATGGAGAA
AAATCCTGTCATCTAGTTTTGTAGCGAAATTTTATGAACGTTTGATGGTAGGAAATTTTA
AGCTATTACTATTATTTGATTAGGTAGCTTTGAATGATCTGTCGGCTAAGTTTGTGTGAA
TACATACGGTTCTACTGCAGCTGGAGTTATTGTATTGTACTGGTTGACTTAGTAGTCATG
TAGACTTGTAGAGTACTGTATGCAAATTTTGGTTAATAACCGTGTAGGGCTCTCTTGGTT
TGAACCTTCCACAGCGAATTTACTGTTGCATTAATCTACTTTGATGTTGTTTTGTGAACT
CTCACTGAGGATAAATCTAGATATGCACCTTCCCGCTTGAACCTATATAAGATATTCTCG
GTATTGTACCCTGCGTGGATATTGTCAGTATTAGTACCCTGCGTTGATATTCCTTACTGC
TTACAATCTCATGTAGACATTATCCATTACTGCCAACAAGCAACTATTATTTTCTTTTTT
CATAAGTTTATTCCTCCTGATTTGATGTGTAGTTCACAGTGATGTTTTCTGTTTTATAAA
GAAAATTTAATTTGTTTTAAGCACAATCCACGTTCTGTGTTTGATCCTGGAGTCGATTGT
ATGTATCTCTTGCAGGTTGCATCACCACCAAGGAGCTGGGAACAGTCATGCGCTCGCTGG
GGCAGAACCCAACGGAGGCTGAGCTCCAGGACATGATCAATGAAGTCGACGCTGATGGCA
ACGGCACCATTGACTTCCCAGAGTTCCTCAACCTGATGGCCCGCAAGATGAAGGACACTG
ACTCAGAGGAGGAGCTCAAGGAGGCCTTCAGGGTGTTCGACAAGGACCAAAACGGCTTCA
TCTCTGCTGCTGAGCTCCGCCACGTCATGACGAATCTCGGCGAGAAGCTCACCGACGAGG
AGGTGGACGAGATGATCCGTGAAGCTGACGTCGACGGTGATGGCCAGATCAACTACGAGG
AGTTCGTCAAGGTCATGATGGCCAAATGAGCGCCGAATCGTGCTCCGAAGACAGGAGGAG
AATTGTGCATTGCATATTAGTTTAAGACGAAACTCTTATTTGATCGATTTCCAGTTAAGC
ATCCTACCTAGCTGTAGCTGCTAAAACGGATCGCACGACGCAATTCCTGCTATGCTCTCC
AGTGTGTTTCCAGACCTCTTGTGTTTTATGTGAACTTGTGTCCTCCCTGGTGTATCCTGA
TTGCTGTTGGGCCCGTCTGTAGTATATTTTCTCATCAACTTCTGCTTCGCTCTTCTATCT
AGTATCAATGGAAAGCCGGTGTTTCGTAATTCTTTGACTCTTTATTAGATGTTATCCTGT
GCTTCGGTATGCGTTTTTGCGTGTGAACGGCAGATAAAGATACATTTGATGTATGTGATG
CTGGATGAAATTTGAAATTTGAATTTAGCCATCACAAAACAGTATCAGGCTTAAATGTGC
AGCTGGGTAGGTTGCAACAAACAATTTGCTGGATGATAGCAACGTTGCAGCCTGTGTCTG
TGAGGAGTAGTAGGTAGCAACTACCACCATGCCCCTGGTCCTCTTAAGGCCTGCGATTCC
CTCTGCTTGTGGAGGAGTGGATCACACACACACACACACACACATGGAGCAGGAGAAGAA
GCTCAAGGTGCTCTGCCTCCATGGCTTCCGGACAAGCGGGGGTTTCTTGAAGAAGCAGAT
CAGCAAATGGCACCCTTCCATCCTCCAGCAGTTCGACACGGTTCTTCCCTTGACCTGTGA
TAGTTTTTTTAGCATTTCGCCCTTTGGTTCGCTCTTTTGAGCCTAATTTTGCTGGGATTT
CAGGTCTTCCCTGACGGTCAGTTCCCAGCTGGAGGGAAATCGGACATCGAGGGCATATTC
CCCCCCACCATACTTTGAGTGGTTTCAGTTTGACAAGGTGCCTTCTGCCCTTTGAAATCC
TTTGAAATCAGAACTGAATTCTGCACTTCTAAGTTCCATTGGCATCTTCAGTTTGGTCCC
CTGCTAACATCACTCATGTATTCCTATTGCAGGATTTCACCGAATACACAAATCTAGACG
AGTGTATTTCATATCTATGCGATTACATGGTGAAAAATGGACCTTTCGACGGCCTGCTTG
GATTCTCCCAGGTAAGGAAGCAAAAACCTGTGAAGTAACTAATTCTTCCAACAGAACCGC
ATTCAACTGTTTGAGGTGCTTATGGCAACACAGGATCTGCTGTGTGTTGAAAACATAGTT
GTATGTTTCGGTTCACCAATTAACTTCCCTTCCCTTCCAGGGTGCAACACTTTCAGCCCT
TCTGATAGGCTACCAAGCACAGGTACTCCTCTTGAACTCTCAAATTCGGCAAACTTTGAG
TCGTACAGTTAAGTTCCAGAGATATACGGAGGAGCAAGAAACAGCAGATCGGATCTGCAA
ATATTAATAAATCAATTGTGACATCCATCTACGGTTATTAAACAACATAGTCCCCGGGAT
CTAGCAATTCAATTAGTGGTTGAGAGTTTTTTGGCCCCTTTATTAATAGGCAACTCCTGT
CCATCTTGACAGAATAGTAACTTTTGATAAATCTAGTAGTGTCACATGCCACACCCAATG
AGAAAGTTATTCTTCAAGAGCATGTTGCCAAAGATATCATATTCTTATGCAGAACATGGC
AATACAATCTTGCATCTATCTAAGTAAACAGTTCTAACTAGTATTTACTAGGACATGGAA
ATTTAGGCAGTAAATTTGGTTCTCAATGGAAGATGTCCTCCAAACCATGTGCTACTTCTG
GTTCCATGTGGATTCTGACTAGGTTGAATGATTTAGGGCAAGGTGCTGAATGATCACCCA
CCAATTAAGTTCATGGTGTCAGTATCCGGGAGTAAATTCAGGGACCCAAGCATCTGCGAT
GTGGCCTATAAGGACCCGATCAAGGCGAAATCTGTCCATTTCATTGGAGAGAAAGACTGG
CTCAAAGTACCTTCCGAGGAGCTGGCTTCTGCCTTTGCTGACCCTCTCATCATAAGGCAC
CCCCAGGGTCACACTGTCCCCAGGCTTGGTTTGCACTCTTCCCTGTCTCTCTCCTATGCA
AATAACTGTCGCATTGTGTTTGCTTTTCACTCGGTGACCCTGCATCGCATAGCGCTTTCT
TGTGAATAGAATTGAGAGGCGGATTGTTTGTCTTTTACAGATGAGGCATCTGTGAAGCAG
CTTTCTGAATGGAGCGCAAGCATCCTGGAAGACCTCAAGAAGATAGACGCTCCCAAGGCC
TCAAATTCGGAGATTTCAGCAGATAAGGACAATGCTGGCGTGGAGTCAGCAGAAATCCTG
ATGGAACAAGTTGCAGCCTGAGGCTAGCTGAGCTTCGCTGATTGAGTTGCGGTGGAGTCT
GAAAGCTGTTGCTCGCTTGCTTTATCCAGATTACTTGATAACCTTGTTCACTGTATTAGC
CTCATTGAGAGAGGACAATAAATCAGTCCCAATTGCCTGTTTTTTTCTCCCATGTTCATG
CCTAATCTTGATATCAGTACGCTTCGATGCTACTCGACAAAACTTTAACCTTTCCTTCTT
CATGGGAAAAAAGAGAGGTACTTGAACCTACTGGTATATGTTTCATCTGCTTCTAGACCA
TGAAGTCATGAACCAGCCTAAAGCTCTATATACATTGATCACCGGACGAATCTACAGGGA
AGGGACAAAGGACAACTATATACATGAGAACCTAAAATACTACTTCCTGAGAAAGACACT
CTGCAGCTGCCTCATGTGGAGCTTCTTTCTTCAGCCTCACTCTCGCAAACCCAAACAACA
TCCTTTATCTGTGCAGAGAGTGTTTTATAGAACTGCAAACAATTAATGCCAAGTCAGTAA
GGTTTACCCATTCGATATAAACTGATTTGCAACAACAAGGATAAACTCAAGGTAAAAAAA
AAGGACATTATTCTTTGTTGGGTACTGACTGAGCTCTCCTTCAGCTCTAGTGGTTGTGTT
ATAAGTCGCTTGCTTAAATTACGTGTGCATAGTATTCACGAGCACTTGAATAGCATAAAA
ATCTTCAGGAAAGAAGCTACATCTTAATTTACCGATGAAATGAGTAGAAGAGCTATAGAA
CCGTAATATTCAAGAGCAGTACCTTCTGAAATTCCAGAGTATCTCCTTTTGCCTTTTTCA
GCTCAACAACAAACAAAGATGGAGCCACTTGGAAAACCTAGAAATGTCACCCTTGATCAA
TAATTGTATTACATTGTGAAAGGCATTTCTGAAACTGCGGTGTTTTTGTCTAACCTCAGT
TGCAACATTTAGGTTTCCTTTTCTTCCTGCTTCTAGGTTCTTCATTCGCATCTAGAAAGA
CCAAGATATAAAATGAAAGATATAAGTCATGGGGATGACAAGGACAGCCTCAGTTACTCA
TATTCAGATACTTCAAGTTTAGCACAACCTATGTTAAAAGTCGAATGCATGGAAGGATGC
TGGACATTACCTTGTAGTTATTCTTTTGGATATCAAACCCAAGTGGCTTAGCTGCTTCCT
CTATCCGACTGATGATTTCTTCAGGAGGACACTGCGATGTAAATCTTGTTTCTCTTCTGT
ACTTCTGTCGTTGGTTAAAAAAATTAGCTGACTGCAGTTGCATGATGTGAAAAATTGCGA
CAAATACACAGATGTTATAAAGAGATTTATGGGACACAATGCTGCAACAGTTTCTAACCT
TATCAGCTTCAAAAAAATTGTCTAGGTTCAGTCCCTTATTCAGTGATATCAACTCAAATG
CGTTCATCGAAGCTGGCTGCCCTTCCATTTCCTCCTTAACTTGTTTTTCCTGGCAATCAC
AGTAACCATCCATTTTAGTAAATATTATCTCAAGGTGCTAACGGCTTTTCCAGTGAAAAT
AAGATCGATTAACTCACTTCCGAGTCTCCGAAAGCAGCATCAACATCATCCAAACTAGTT
TGATATTTCTCATGAAAAACAGGTGGCTTGTACCCTTTTTTGAACCATGGATCTTTTAAT
AGTTGAGGGATAGTTATACGCTGGTCAACGACAATGAGGAACCGAGTAAGAAACAACTCC
ATAAGTAATGTAGTCATAGACCAAAAAAGTGCAGAACCACCACTTGGGAGCGGTTCTGTT
GACCTTTTGGCTGGCTAATTTCAAATTTCAGAAATGGAATGTGAAGTAAAAAAGCTTACA
GTAGAAGGATTAGGATCCAGAATCCTGTGAATCAGTCTTTTAGCTCCATCAGAAAACCAA
GAGGGACAAGTAAACTGAGCTCCAGAGATCTGTCAAGCGAAAGAGGGTAAATGCAAATAT
ACATCCAGTAATATGGGTGCTTATGTATTTACTTATTCCTTCTAT