Contig Data
morexGenes
Links



Map Locations of contig_244012 (5492 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_244012

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34483 2 959 bp MLOC_34483.1 Available Available LOC_Os03g05260.1, FRAME:-3, EVALUE:5e-106, 13103.m00551 protein ankyrin repeat domain containing protein, expressed





CDS Structure of MLOC_34483






Contig Sequence (5492 bp)

>contig_244012 5492 assembly3_WGSMorex_rbca.fasta
GCCGGCCGAAAGTTTCGGCCGGCGCATCGGCGCAGAGCACTGGCCTAGCCTATACGTATC
TTCGTAGACAAGACAGAAAAACTTTCGGCCGGCGCGTCGACGCAGAGCACTGGCCTAGCC
TATACGTATCTTCGTAGACAAGACAGAAATCATGGTCTCATCCTTATGCCATGGTGTAAT
CTAGGGATTTTTCACAATAGAGTCCACGCCCAGTGGACCCGAGGTGAGTTTGGTAGCCTT
TTCACCCTTGTTCTTCATCGAGACATGCTGATTATGGACATGTCGAGTACATAAATTTTG
GCATGATAGCTTTCATCTATTATGACTATTCATAATAATGGAAAAAAAAACATAAAGAAT
AAAACTGATTTTAATGGGGAATATCATATATCAGTATCATGTATATGATACTATATACAT
AATACACAATATATTATATGTTAGTATTATAAGATAATTTATTTATTATCACCCATGACC
ATTTTTTCAAAAAATCGTTCGATTCAATGATTTATCGTTCGATTTATCGTTCTTCGTGGA
TGACTGATAAGATTATTTCTTATCTTCATTGTTAATCTTTTGGGCCGATTTATCGCTCTG
ACAAGCGATTTATCGGGAATCTACCGATAAATCGGGCCGATTCCTTGAACTATTTTTGCA
AAAACTATATTTATTTGTGTTTTGTGGACTTTGCTATGTAATATGTTTTTGTTTCTATCC
AATATTTTTTATGTTGGATATAGCATATTTTAGTGTTGAAAACTCCGGATTTGGCCCATT
GTCTGTGTTCCTGATTACGGGCGCAGACGATGAGTTTGGGCGATAGCACTTTTCTTGTTA
TGGGCGGGTTTGGGTGATACCTAGGTTTTTGCCCCATAGTCTGTGTTTCTGATGACACGC
GCAGACGGTTGGTTCCTGGTATTGCCCCAAACTCGCTTCTCTCCCTTTCCCCAATCCTTG
CTTTGGTTCGGAGAAAAACTTTGTATTTTCGTTATGCGTTATAATGGAAAGGGGGAAGCC
CAGTTCGAAAACTCCGGATTTGCAAAAAATGATAGATTGATAGCCGGCAACCGACCGATT
AATAAACAACCGATAAAGTTGAGTTGACTAATCGACTGATTTTCGATTAATCTATAATCC
CTAACTGATCAAGACGTTAAAGATAAGTAATATTCTTAACATTGTGCATGACTTGTAGTA
GCACATCATTTAATATGATACGGTATCATGATATGATATTCAATCCTTTTTTTCTTCATT
TAATTCTATGACACCTCATCAAAGTCGCTTAGTTGACACACATGATACTACCTATGATAC
TTCCATTACTACCAGCCTAACATAGATGATTTCTAAGAAAAAAGATAATGTGACAGATAA
TTAATTAATGAAGAGAGAGACAAATTGAGTAAAATGGCTACTTACTCATATTATGAGTAA
CATCACACATACCAAGACAAGATAAATCTATAACCTAATAAAAAAGCGTTGCGTGACACC
ATACATATGTTACTCCATACTATATAGGTAGTAACATACACCAGTAACATGTGTATTTTG
TTAAGTCTAAGACAAGCTAAGCTGAGAGTTTGTTTGGTTGTATGGGAGTTCAGTTTAGTT
ACCTCATTCCTGATATCGTGCGAATGCATCCACAACCGTGAAACAACGACAAATGCATTT
TACACACAATTCTAGCAAGATTTCAACATAAATTAATATTCAAACAAAGTTTCAACAATA
TCTAGACATGGAAAACATTGAACCAAAGTATATCAAAGAGAAAAAAGGGATCACTGCTCT
TTCCAATGTAAAATTTGCATAGATCAATGACACAAACCGATGAGCTCTACTAACTGTCAT
CTATAATTGCTGAACATTCAAGCCTCCTTCAAAATTCACATGCACTGAGTAACTTGAGCA
ATTCAGTCTCCGGTTGTCATGGACGAAATATTTCCTTCTTCAAAATTCTCAAGGGTGAGA
GTAATCAATAATCATGCTGGAAAGGCAGGGCATGAGAGCTCAACTGATTGTGGCTTTGAT
ATAACGCCAAAAATACAGATACAAAGAGCAAGTGGAGAAACACCATGTCCTCCTCTTTAC
ACATAACTCCATAGTTCTGGTGACAACAGAAATGCAATTCTCATAGTAGGCAAGCTGTGT
ATGAAGATACTATTAGTTCAATACTACCACTCATTTTACTGCCCACTCATCATTTGAGCG
ATTTCAACCAAGGGTTCCCTCCGACAGATCCATCAGTTCGCCATATGTATGCTGGCCTCG
ACTTGCTTGGCGGTTAACAGGGCCCGGACTTCGGTATCTTGATCGGCCATCTCTGCGGCT
GCCTGCCCGTAGGTGTTCTCCTTCTTGGGACATGCACCAGCCTCGAGCAGAAGCTTGACG
GTGTCCATGTGTTCCCCTCTGGCAGCATGGTGGAGTGGCTGCGTGAAGCAAAGACATAAG
GTTATTGACCACGCCGATAGCACATTAGCTGTAAAATCAACACAGTTGGCATATGATTGA
GTGGTCAAGAGGGTTTACAGTATCGCCTTCAGCATCAACGGTGTTGAGCATTCGCGTTGC
ACAACCCTCAGCATTTGCAGCAAAACTGAGAATGTACTGAACTATCTCAGTGAAGCCTGT
ACAAAGAGTGTCAGTAAGTAAACTAAACACATTGAGTGCAAAAAAAGGAGGAAATAAGCT
CACTGCAAGTAAGAGAATGCATACCTCCAGCACAAGCATCATGGAGAGGAATTGCGCCTT
CTTCATCTTTGCACTCTAAGCTTGCTCCACGTTCCAGCAGTAGCTGACAAGATGAACATG
GTTACATACAACCATTAAGCGGAGAAAAAATGTATAAAAAGGTGGAGAAAAATATGCAAG
ATAGCAATGTAAACCTGCACACAAGGTAGATGGCCATATAAGCATGCCAGGTGAAGCACA
GTATCACCATCTTCAACTGGATCATCAATGCTGCCACCATAGTTATCTGCGTAAACATAA
CAACAGGCTCTTAAGTAAGAGCTCCATGAACATATGCAAGGCATGCTTTTCTGTTTCCAG
ATTTACACTTTATTGACAAAAAACCAGCATTAAAAACAGGTGATACTGACAAAGAAAATA
AACATCAAGATAAAATAACAATGCAACAAAACTTTGAACAGATGCAGCAGTATGACCCAA
CACACGATGGTTTGACAATCACCATACAGATCTCAGGTATATGTGATCATTATAGGATTG
TAACACTGCAAGGGTAAGATCTTATGGCGATCATCACTTAGAGAAGCTTGAAGAAAGAAC
AAGAAGAGTAACCATGACATGCATCCAACCCCTGTACCATGCTATACCACAGCAATAGCA
TCTCCCTTTTTTCAGTTTCAGAGTGAAGTGCTGAATTATTTATTATGTATGGTACAAGAC
AATCAAACATAGACGTATTTTTCTACGAATAAATGTTCTTAAGCAATAGATATTACATCG
TTACAGGTTTTCAAGGAAACAAGTTAACCATAAAAACCAGCACAAAACGGTGCTCTCAAG
ATGACAGCTATTCGTTGAAGGTTGATTACATTCATGGAGAAGGAACATGACATGCCAACC
AACCAAGCAAAGCATGCAGTTTAAATAAAAAATATAAGATATTCCCAAACTTAGAGTTAT
CCCTAGGATATGCAAGGAAATAAATGTTGAGTTAGATATAGGCTTTCCAAAAATGCTTAT
GCTTTGTGTTCATTTCAGAAAACCAAATCTCATCTCGAGAGCCATACAGCAAATTCTGTT
TCTAAACAAACGTTTTACTGCAACTAACATCTTGTTGCTTCCTTGGCACAATACAGTATA
ATCCCTCTCCCGCAAAAATAAAATAGAAAATGCAGCATCATCACAATGGCTCTAAATCAA
CTGCAACAGTTCGAGATGCCATTGCCACACTTCTCACACAAGAGATGTCCTAGATTTTCA
GCAACAAAATTTAGAGCTTATCATGCATACATGTGGCGCTTCCACACCCAAAAATGCATT
CTAGTGCTACTGCACTATGTGACAACTTTGCTCCTGTGTCAATGAGCTGATGTAAACACA
AAGTGGCCGTGTGCAAATGCGACCCAAACCGATACATAACAATCATCCAACACAGGCCTT
GCACTAGAAAAAATCAGGTAGAAAATATAACCTGATCCGCTAACAAGGCCATAGGTTCAG
GCAGTACCACTAAACTATACGCTGAAACAGCTGCAATTTTCACGGGCACGTCATGAAAAG
CTGCGGCCTGGCTGGCGAATCGCTATAAACCTTGACGAAAGAACAAACATACAAGCGCGC
TGCACAGACAAGAACATACACGAATCGATACAGTACGCGTACTCTACTCAAATCAAATAA
CCTCCTAGAACCTTAAGAAAAGTATAATCGAGATTCAGGGGGGCGGAATTAGGCCGATAC
CGAGCGCGGCGCGGAGGGCGTTGACGTTGCCCACCTGGGCGGCGTTGGAGATGGCTTGGA
GGTGGGGAGGCAGCGGCGCCTCCTCGTCGTCGGAGGGGGCGACGAAGGCGCCGGCCTGGT
CGGCGACGTCGTCGTCCTCGACGAGGCCGTTGCGGCCGCCGGGGACTGCCATCTGCGGCG
AGGGCTCGCTGGGTTTGGGTCTCCGCGCGACTGGGCTTCGGTGGGCTCCCGGGCGTGCGT
TGCGCTCTGACGGCGGCTGCGGTCGAGACTTGTGCCGAGAGCTCATGGGGACGAAAAACC
TACCTAGGCGGCGTCTGCCCTTTTATCTGGCGACGTCGGATCAGAAACAAACGCTCCAGA
TCGTAATAAGACGATCATATACGGGGAACAGGGCCTCATTCGGTTCCAAGAAACCTAAAC
CTAACATTTAGAGCATCTTCAATAAATGATGCAATGTAGATGTAAAAAAAATACATCTCT
GTCTTTTAAAGATGTAAACTATACCACTTAGAGCAGTCCAAGTTTGCATCTCCAACTTCA
GAAGATGTAGAATTGTGTCCGCCGTCAACGGCCATTTCTTTCCGCTTTGGTGCGACCAGC
CGCCGCCCGACTCCCACATGCCGCCCGCCGTTGCCATGGCCGACGCCAATGACCCCGTCG
CCTTCTCCGACTCCGCCGTCGGTGCCCTCGCCCACACTCGCCGCGGCCTATCCCTAACGA
GCCGCCTTCACCTCCATGCCACCGCGGCAGCCGCCTTCGCGCCAATTCACCCCACCCCGC
CCGATCACCGTTGCTCCGGAGGCCGCAAAGAAGAAAGAGGCCACCAAGCCTCGCGATGGA
GGCGTCAAGCGGTCGGCGACGCGGGGCCGCAACCCGGCGGGGAACCAAGGTCGGCCGATG
AAAATGTTCAAGCCGAGCACGATTTGGGTGGTCGATTTGAGCTGTCGGCAACCATGGCGT
CCTCATTCGGCGACGTTGCTCCTCATCCACCTCCTCTACCGCTGGCGGCGACCATGGAGG
AAGATGTGTCCACTGTTGGAATTATGCCCTAG