Contig Data
morexGenes
Links



Map Locations of contig_244 (2240 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_244

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34473 2 1037 bp MLOC_34473.1 Available Available LOC_Os01g16260.3, FRAME:-1, EVALUE:3e-59, 13101.m01815 protein major facilitator superfamily antiporter, putative, expressed





CDS Structure of MLOC_34473






Contig Sequence (2240 bp)

>contig_244 2240 assembly3_WGSMorex_rbca.fasta
GGTACGTAGTACCGGTCATAACAGAGTTATCATGAACACATGCTTCATATTGAAATATGG
TTCTAGGATGGCTTAACTCTTGAAAATAAGCATCTATCATGGGAATGAGTCAAATCAAAT
TAAATAAAGTTTCCTTAATAGTATTATATTAGTTCCATCAACAAGTAAAATATATTTATC
TTTCGATTTAATCTTATAGATTTTTATAAGGAAACTTCTAGATATGCCTATGAGTACACA
TCAATGATATAAATAGTCATATATACATGGGGCTGGAGTGCTAGATCCTCTCTAGGTTTG
TATCTCCAAAATTTTCCATGATGTTCAAAACTTTTAATCTCAATCAAAATATCTATTAGT
CATGACTTATAGATTCAAAACTCCTAATATGGAGAGAACTTCCATATTGTTCTTGTAGTT
AAATACCTGAGAGTGCAAGGATACGGCCTACATCTGTAGAAGTAAAGCTTAATCCACCAT
ATTTCCTGTCACTAACAGCCCAAAGAGAGAATACCTGCAATTTTATGTTTGATCAAATCA
AATCCGTAATGACAATGGCAATGGTAATGCAACAAGGATACTGAAAAAAATAAGTGAAAA
CATGATATTGTTTCTCAAGGAAAGAAATGGTATGCTAAACATCATTGGAGGATATATCAG
CAATCAAATGACTCATGTTACCTCTGCATAAGCCACATCCTGAAGAGAGAAAAGGCAATA
TACAGTGATAGTGGACATCAATGGCCAGTTTGTGAACAAACTCCAATATCCACCACCACT
TTCTTCAGCATTAGTGTCAGAAAGAGATTCTTCCATGGCTTCAGTTGAATTATTTGAATC
TGTAGCTTCATTGTGTTTATGTAAAGTTTCCTATTGCATTATATACATGTTAATTAATGA
CGAGATCTACAAAGAAATGTAAAGATGATGTTACATGTACAACGACAGTAAGGTATTGGT
TGAAAATACTACAGGTTGCGTACAAACTATATTAAGTGCCTTAAGCAACTATGTTACTCA
TATCCTTGGTTGGTTCCCTTAAGGCCACTCATGACAATAGTTAAGTGCCTATTAAAAATA
GAAGGACAAGAAAAACTCACCGGAAGCCAGATGCAAGATATTAAAGCAGCAACGGCGAGG
ATTGATACACACAAGCACGGGAGAAAATATGGAAACCTATATCAATGTGTGTTTAAGAAG
AATTAGCATCACATAATAAACCAATATGAAAAGGATAAACACAGTAAATTCTTACCTCCC
GAATATAGATTCCTGAGAGAACATGCCTGGATATTTATCTGCTGGCTGATATGACAACAA
CATTCAAATAAAATTAGCTTGGGAGGCTCCTACAATTAATTTTACAATAACTTTATGATA
ACATTGGATTATTTTTAGAAAACGAATATGGGCTCGGTTGGATTGCACACTTGTATTTGG
CAGATGAAATTGGACTAGTAATTCTAATTTCATGAGAATGAGAAGTACGACATGAGATCA
CTTCAATTCATATGCTGGAATACCATGAATTTCTGAACAAAGTTTTGTATGTAAAAGTCA
TTCCAAAAGCCATTTGGTTCAACGCATTGAAGTGTTACGTACGTACAACATACGTAGACA
ATGAACTATGATACATTACTAATTTAATGTCAGTAGTACATATACAATATAACACACAAT
ATGTTATAGGTGAGCATTAATACTATGGTACACTAATGTTGTCATGATATTATGTTACAT
TAATTATGTTATTCACATAATGTGTTAGGTATTGTAATATTTCAATCCTACAATATGTTA
TATAGTGGAGGAGACACATTGAGGCCAACAGGGGTCATGCACCCCCAGCCTTGGCCACTA
TTGTTATACGTGCACTAGTTTTCTTGGAATTGGGTTAGAAATCCACTTTCATAGCGCAAT
TAAATGACAGATATTCACTTGGCCCAAACCACAATCCATATGGGACTTGAGGTAACTATG
ATGGTGTGTGCTTACATTTAGCATATCAAATACAATGGGAATAAAGTTAACTAGTATTCA
TTCATGTTCATGGAAAAAATGTATGGATGGGGAACATGGCATATTTTTGTCATGAGGAGT
AAGCATTGACTTCTATCAAATTGGATGTAGAACCTAAATGACTACGAAGCAAGTAAATGG
GTTATATATAGAAGGACCAGGAGAACAAGGACAACCAACAAATTTTTATTGGTACTATGT
ATATTTTGAGATGGCTCCCC