Contig Data
morexGenes
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Map Locations of contig_243847 (4587 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_243847

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_34425 3 1272 bp MLOC_34425.1 Available Available LOC_Os05g33100.1, FRAME:-3, EVALUE:4e-144, 13105.m03416 protein endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed





CDS Structure of MLOC_34425






Contig Sequence (4587 bp)

>contig_243847 4587 assembly3_WGSMorex_rbca.fasta
TAGTCTAGGAGTCCTTATTAGTCTGTTAGTATTAGTCTAGGAGTCCTTATTAGTCTATCT
TTACTTTCCTTGCACCTCAAGTCATGTGTAATATATATATATGCCCCTTGGGCCTTCAAT
ATAGACAAGTTGCTTTCCTAACAATACTAAGTTGAACAAATATATAGGTAGACAAGGGAG
AAAAATATGAACTGAAAACTACCAACAGGACATCAACATGCTCTCTTTCCTTCTCATAAG
AAATATGTTTCCTTAACACCATCTAGTACATGGTTGTATGGTCGTCAGGACGCAATGGCC
CAAGGCCACCGTTTCTACATGCAAACTCACACTTTTGCTTCGGTAGACCCCCTCCTTCAC
AAAATGTACAAAGGGAAACATATATCCACCTCTTATTGTATACTTTTGTACACTACAGAC
CGCCGTGCGTATACCCACCTCGTATTGCATACGTACGGCGGTCTGTAGTGTACAATACGA
GGTGGGTATAAGTTCCCCGGTCTACCGAAGCACACCTCGCAAACTCAAACCACTGACAAA
ACTAAGCAACTGCTCCATGTTGAAGGATATGAAAAGGAAATAGAAAGCAAATCCAGCTAT
TTCGAAATGGTAACCCTCAACCCTCACAAGAAAATAAATTCACGGTGTACCTCAGTTTTG
GCACGTCGAACGCTGCAAAAACAAAATGGTTATCAGTACTCAGTATACGTACTCTATCGG
CACCAGAGTCTGGAAAGCTGCAGGTGTTGGAGATCGAACAGTTGCCTTACCGAGGTGTTG
GAGATGACGGCAGCGGACCACGGCTTTGGAGTGGGTAGAGCCAATTATTGTAATAACGAA
AAATGAGACAATAACAATCACCACACAAGTTATAGAAAGATAAAGAGACAAGTGAGCCAA
CTCTCGAAACAACAAATATCGCATTTTTATTTCAGTGCAATAGTATTATCGTAATGTGTT
CAGCACAAGCAGAGACCGATATGAGTAATCACACAATGCATGCTAGCACAGGACAGATCT
GTACAACCAAAGATGCAGGCCCTATAACATAAACCCTGGATGATTACATGATGACTGGTG
AAGAGTGACACTGGCGTATTAAGGACAAAGGACCGCTAATTCAGATTCACTGTAGGTTCT
TGCTAAACCAGTCGATCATATGTGACAGGGCTTCCTCAGCACTCTTCACAGCACCTGCGT
CTTCACTTTTGTATCTCACAGTCCATCCATGAGAAACCCCAGGGAATATCTTGACAAAGT
GAGCAATCTGTAGGTTCATAATGATCATATCAGAATGAAAGATTTTGAGCTCTGATTCTG
CAACAATGTCTTACCGATAATGTGTGTCTCCAATTTACCTACATTCTACTGTACTTTCTG
GTTGCTTTTTCTCAATCTGTAACATCTATTTCCTGTTTTTATCATGATGATACCACACTT
TCTGGTGAATATAAGGTAATACCTTCTTACTTCCAAGAAACTAGTCATTCACATGGATAA
TAACTAGTACTCCCTCCATCCCATATTAACTGTCGCTCAAACGGATGTATCTAGACGTTT
TTCAATGCTAGATACATCTGATTGAGCCGCATTTAATACGGGATGGAGCCACAGAGGGAG
TACTATAAAATGCTGCTAAGTCCATTGACTTCTAAAGTAAAATATTGCATATAAATGCTA
GTTGGCCCTTGATTAAAAGATGATTGATAGCTCCTCTGATGTCAAAAGCTAATTAGATTG
GGAGGAAGTAGCAACACATTATGCTGGAACTGTCAAACAGTATACTAATCAGATACAGCT
TGGCACTGGGGCAGTTTCAAATTTGACAACTTAGTTTAACCTCTGTTATATCACATATTC
CAACATCATAGTTGATTTGAAGAACTGGTTGCTTGAAATGAGAACTTACCCCTGAGTTAG
AGGACAGAACCTGCTCGAACTGCTTGACCAATTCTGGTGGGGATGTTTTGTCAATTTCAG
CTCCAAGTACAGCTATGGGGCATTTCACCTCTGAAATATAGCACATGTCGTAGTGTTAGA
ATCTAAAGCCTTGGAAATGGGACAATGTTAAGTATGTATCTTGAATTCTCAAGGAAGAGA
CCTTACCTTTGATATCTTCAACAGTAACAAAAGAAGGGTGTGACATAACAGCTGCATGGA
TCTCATTAGCTTTCGCTAGCTCAGCAACCACCTTTGCTGATATGTGAGGAGAAGAAGCAT
AATGCTTAGCAGGTTAAACCTTAGAATTTGGGTTCAGATGTAACAAAACAAAACAGTGCT
TACCACCCCAGCAATAACCTGCAGCCCCAACAGTAGATACTCCTTGTTCTTTGAGAGCAG
CAATAACAGGTTTTGCCTCTTCAAATGCTTTTCCCTGTATAAAGGAACAATTAGTTCGTT
TATATTAGAAAGATTAATAACCATAATGCCACATCACCTTCAGCAAGAAGTAACTTCAGA
AATTGACACAACTCCATTTAAAAAAAAAAAGCGTGTCTTCACCCTCAGGCGACACAGGGG
CCTACATATATTCTTACAATGTCATATCAAGCTGCCATATACGTGCTGTTAGGTTAGGAC
CTATTGGTTTTGTCATCACATCCCACCCTTGGTCACTTTAGTTAACACTGTCTGAATCAA
AGTACCAAGGCCAGCAATTGCATGTGATCCAAACTGGAAAGCTTTTGGAACATATACCTT
AACATAAATTAAAGCAAGGTGACCCGAACATTTACAAGAAAATAAAAGGAACAAGGTTTG
AGGGAATCAGGAGACAACAAACCGGGGCATGCTCCTTTAACCACACTTGTATTGGTCTGT
CGGCGTTTTCAGGTACATATGGATCCCCATGTAAGAAATCTGGCACCACAACTAAATATC
CAGACGAAGCGACTTTATCGGCTATCTTCCTTCATGAGGAAAGGACTACATCAGAACTCC
TTCATAGCTGACACTTGTTGGTTGCGACAAAGCAAAGTAGAGGGCGAAGGCCATCATTCA
TAAAACAAGAATTCGACTAACTATTCAAGATTTAACAGACAGGTTAAAATCCCACCATGA
ATTATTATTAGAAGAAGGCTTCAGAGAGTCAGGGGACTAAATTGCCAATTTCTGAACAAT
ATGCACAACTTGACAGAAGAAAAAACGGCATGGGAAAGGCAATACGGTCACAACTCACTA
CTACCGCATGACGAACAGGACAGCACTCTGCGGACTCTACAGGCATGTCGCTGCTAAACC
AAAAGATGCAGGTGCAAAACAGAGCTCGTGATGTGTCAGAGAGCAAAAAAAAACGTATAC
CTCAGATTCGGCGCTTCAAACCCTGCAGGGGGGAGACATGAAGCACTGTTAACTACTCCC
CAGCAGAGGAGAATCCGGGTTATGAAAAGATAAGAGTTCTGGTCGATGGGGGGATTACCG
AAGACGTCGGAGATGAGGACGACGGCGGCCTTGGACTCTCGGGCGCCGGAGACGTACGCC
GTGATCCCGCCGAAGCTGTCCACGACCTTGCCCTCGCCGCCGGCGGGGTTGAGCGTCGGC
GGGTCCGCGCAGCACTGCGGGGTAGCCATCCTGCCGAGTGCCGAGGCCGCTGGTTCCTGG
GGACTGGGGCTGGGAGGGATACGAGACCAGCCGACTGAGCTGAGGAGGAGGAGGAGGACC
AGGCGACGGCAGCGCAGCGACCCGAGGACAGCGGAACGCTTTGACGGCGAGTCGTTCCGA
ATCTGCTCGTGCAGTGGAGACTTTTTTGTTTACTTGGCGGTATCGAGGCCGCGCACCAGG
GCAGGCAGGGTGACCTCACTGCTGACCCAACACTGATTTCGTTTGTTGCTTTGCTTTCTG
TCCTGTGGCGGTAGCGACCGGCCAGGCCTGCCTGCCGCCGGCGCCAGTCGTGGAGAAATG
GGACACGCTGTGAATTAAGAGCATCTCCACGCAGTTGGCCCGGGTGCCTTTTTGACGTTG
CCTCAGCGCTTTTTTCGTGACATCAACTTTTTAAATTCGTCTTTCTCGCTGTTAAAAGAG
ACGTCACGAGTTCGACGATCATCATGCCACAAGTCGACGATCAGTATGTCATAGTTCCTC
GACGATCATCATGCCACAAGTCGGGGATCAGCATACTCTAATAGTTCGGCGATCGGAATG
AAGGGATAATAAGGGTGAAACGAATCAAACGGCCGGCTCGGCATGGCGCGACTCCTCTGC
CGTGGGACTGGTTTGGGTCGTCGTCGACGTAGTCCGGCTCGTCGTCGACGTGGTTACTGC
ATTCGGACTGGGCGTCGTCGTTGGTGATGTGGTCGTGGTCGCCGCCGGCACGGGCATCTA
GCTTAAGATGAAGTCGCGCTCCACGAGGTACCACACCTTCACGTGCCCTTCCATCGTCGA
CGTGTCTGCCCCCATCAAGTACGCCAGGTCAGTGTTCCTTTTCTTCGCGACAACGTTGAT
CATCAACGTCGGCCACCAAATGTCGGATTTCTCCTCCCTCCTGGCAGCACTGCTCTTGAC
GTCGGCGATGCATTGCTCTATCGAAGCTTGCAACCGTTCGGCAGCGGGCGTTGATAACCC
ACCAATATAGGGGATCGCAACAGTTTT