morexGenes - Barley RNA-seq Database

Contig contig_243592
Source Contig contig_243592
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_243592 (5084 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_243592

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_34336	4	849 bp	AK361328	Available	Available	None
CDS Structure of MLOC_34336

Contig Sequence (5084 bp)

>contig_243592 5084 assembly3_WGSMorex_rbca.fasta
TAGCTTATAATAAATTAAAATTAAAATGAAAATGATGATTATAATTATAAAAATTAAAAG
CGTGTGATATTTTTTCTTCCGTTGCAACGCACGGGCCTTTTGCTACAGTAGTATAAAGGA
GGAACAGGATGGAGCGCAGGCGTCACGTCGTGCATTGATTAGCTTAGCTTGAACAAACTG
GTTGGACAGAGGCATGTAGGAGTAGCTTTGAACGCAAGGGAAGTCAAGGCCACCGCTATA
ACTCCGCTCCCCGCAACGGCCATTGCTCCGCTGCATACCTCCAAACGACATGGCCGGCTG
GCTGCTACTCCCTCCGTTTTTAAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAATATGACTACATAAATCCGTATATAGTCC
ATAATGAAATCTCTAAAAGGTCTTATATTTAAAAACAGAGGGAGTACAAAGGAAGGTCTT
GACTCTTGACCGGCCCGGCCAATCTGACTCTGACTCATGCCAAAACAAGAGAAAAATACC
AGTGGCATCGAGATCCGAGAAGATCCAGATGAACGTACGTACATCTCTGCTACGGTCAAG
CACGCATATATGCCTTTCCCCTTGCTCACCCGTATAGTACTACTGTCGTACGAGTACCAT
ACCACTCTCCTGCTGCTACTGCTGCAGAGGTATGTGATCGCGGCACGGAAGCATATGTAC
ATATATATACTGTAAATATGATATATAAATATAAATAGATTGATTAGGCGTGACAAGACA
CGTGCATTAACTATCCGGACGGTGTTGCGTTGCGTTGCATTGCATTGCGAGAGGAAGCTG
GATTGCTAAGCCATCTGCGACAGCGACGTGGCCTTTGTTTTGTTGAGCGATCCACCATAG
ATAATTCATCCATCCATCCGTTGGTTTCGTCTCAGGTTGCAGCCTTGAGGAAGACTCAAA
GTGGCCACACCACCACCACCGTCCCGGACGAGCTTAATGGCGAGCGGCCGTGCGATGCGA
TGCGATGGCTCCGTCACAGCAGTAGCGAGAAAGCACAAACTGAACCCATATTACCTCCCT
CCCAAGGACGGACGGGCGTTCTGGGCGATCACTTACTCCCGGAAAGCGAGGCAAGACTGA
TGACAAGGAAAAAACAGAAAGCCGTGAGAAATGTTGGCTGTCGGTGGATTCGTCGGGAAA
ACGTTGGCCGTCGGCGTCGTACGGCGAGGCACATCAGACGTTCGATTGGACGGACGTCGT
CAGATCAGATATCCCCCGGAAGTTGCACAAAACGTTACCAGCTACTGGATTCTGGAGGAT
CTACTAGCTGCCAGGAGCAGTCAGTCAGTCGAGCCGTGCGTCGTTCCTCCGGTGGCGACG
GTGCAGCAGCGAGAGGCTTTTCACCGGTGGCGTGGCAGTGATCGGCCTGCGGCAACGGCG
ATCGGCAGCGGGCCACGACCGGGTCGAAAAAGACGGATGGCTATCGTTATCGATGACAGC
ATCGAGTGGTTAGCATCGGCCCGGCTTAGCAAATAAGATTACGATTTGACCTGTGCCAGA
GTCGCCGTCGGAGCTCGGAAAGCTCCACCACGAGGCCAGATATGAAAACTGTTCATTCGA
TCTTTCTGAAGTGAAACCGTTGGTTCAGGCGTGCTTTTTTTTTATTTCGAGGGTGCGGGA
TTTGCTCCCGAAAATGCGTTTCCCTTTCTAGAATACTACTAACGCGTTACTGGGCTGGGG
GCGGCACACGAGGGTGCGGAAGGAGCTCACTGGATCCGTCGGAATTTTAGCCGATCCTGC
AAAAAGGAATGCTTGTTAGATTGGAGCTAAGACAATGACACCTTACTAACCGCCTTCAGC
GTCACCGGTGCTTCACAGCAAAAAAGCAGCTCCTGCATTCAGGGCATGGTGGTTTTGCCA
AGTTTAATGACTTCTAACAACGGGAATTTTCTCGGTCCAGAAGGATAACAGGCAATGCCT
AACAGTAGAAATGCTATGGCGTAACAGGGAACGACTATAAAAGCAACAGACCTACAACTC
CTGAACTTCTACGGAGGACGGCACGGCACGAGGAATGCCATTTTCTCTTATTTCCTCCGC
CATAACTTGAAGCGGGGCCGCAAATATACATTGCCCGAAACAAAATGAACCCAGAAAGGA
GATTGAGGCTTAACAGCTCACATTATTGCTGATGAATAGGGCGGCTAAAGTCACCATTTT
CTCCGGTTATTCGGCTTGCACGGATTCTAGAAGGCTCATCACGGTTTCCCTGTCAGGCAT
GCTGGGAATGGCTCCCTTTACCCGAACACACAGTGAGGCGGCGGCGGCTGAAAAAAATCA
AGAAAATAAAAACCTCAAATCAACATGTCAGCAATACATCAGAACCAATTTTTGACTGGA
GGGTGCTTTTAGTACCAGCAAATCTCATGCACTCTTTCTTAGGCTTCCCTTCCACCAGAG
CCACGGCAAAAGCTGACGTGAAGGTGTCGCCAGCACCGGTGGTGTCCACTACTTCTGTGG
CGGGTATTATCGCCTGTCTAATTGGCTCCTCTCCCTCAACAAACAGAGCAGATCCTTGTG
ACCCAAGTTTAACCAAAACTTCTTTCACACCCTGCATACAGGTAATATCATCAATGTCCT
ACTACCTTGGGGTTAATGCATTCAGAGCCTCCGTAGAAGATTTAAATAGCAAATGCATCT
CGCCTATAGAAAACATCTAGTGGAAACTGCTAACCTTTGTAGCAAACAAAAAGAACAATT
TCAACAAGTTATAGTAAAGAAACCGTAATAAGGTAAATAGAAACAAGGAGTTAACAGGAA
AACAATCAGTTGTAAATCAAATCCTCATATTGGCAGCTCAAAGTGGAATATGAAGCGCAT
ATACTGTTGAAACATGGTAGGTAATGGAAAGCCATGAAGTGGGAATAGAGGCAAATGCTA
TCAACATATAACAACACAGATGTCTGCAACTTCGGCGACTTCAATATCCTGACAAATTAC
ACTGCAACACTGTCTGCCATAAAATTATGGCTATGAACACAGAAGAAGCAATTAGACTTA
TCTATGCTATGTCATCAGACCAGACAGCGTCAAACAAAAAACATCAGGCGCTGATTTTCC
GCTTTTATTATGAACTTAGGGATGCAACACGCATACACAGGCCTATACGAAGGACGAATG
GAAGGAAAGCAACACATTCTTTAGAGATGGCTATTATCAGATAAACGTCATAACACAACA
TCATATTTAAAACGTCTTAAATAAAGATATTAAGATCCACAGTCATGGCTAACGAAAAGA
AACATAGAGCAACAATTAGAAGGTAACAACTCACCATTTTATGGCATGCTCCTGCAGCCT
GGCTGATTTGTTCAAAAGTCTCTGTAAGCATCCCAGTCAAACGTGCTAGCTCTGTTTCAT
TTGGACTAAAAATATCCACCAGTTCAAGTAGTTCTCTTGGGACAGGAGCATCCATTCCAC
CTGCATCCAAGATAACAGGCACACCTGCGCCTTTTGCAGCCTGAAAACAAAAGTTTGAAA
TTTTGTTACAAAAGAACCCCTGAAATCTTAGCATGCATAAAAGCAAAGATACAAGGTGGT
TCCTGCATTTCCAACAATCTATTCTACAGAAGTTTGAAATTTGTCACAAAAGAACCCCTG
TAATCTTATAACATGAATAAAAGGGAAAGACACAAGGTGGTTCCTGCATTTCCATTTTCC
AATCTACTTTACACAGTAAAAGAAAAAAAAAAACATAAACAAGACTAGACTTGTTCTGGC
ACAACCTTAAAAATTCAGTCATATAAAGATGTCAACATGAAGCACTAATATTTGGCAAAC
AGGGTAATTGATCTAAATGGAATCTTTAAGATCATTAGCTAGAAAAGACAGAAACACATT
ATCACGCATTTAATGAGATTTTGCCATCACATAAACCTGCATGGAAGCATCCTCGAGGTA
TCAAGAACTAGAAACAAAATTATCCTTCCTTCTGCGACACTATCTCTTTTCCTGGAGGCT
TTTTTTCTCCGAGGATTCAATCACGCAGACAAAGAGACCATTATATTCAGAGTTCAGACT
GAAATGGAAGCAACTCAAACAAATGACAAGCTACTTCATTTTATATCTGAAGTCACGATA
CATGCCTGTAATTTCATTTGAATTCCAATAACATAGGCCACCTACTCCTTAGCAAATATA
TATTACTCCTCAGAATATTTGGATGGTCGTTCCACTTGCACACAACCTCTAATTAGCTAA
ACCAGAGCCGGCTGAATGGTTTAGGGCCAAAGTAAATATTGTAAAAAAACACCCTATGCA
TAAGTCGGTACAAAGGGCCGTTTGGGAAAAAAATCACTCTGAGTTAAGCTTCCACTTTCC
TCAGATTCCACTTCAAAAACTTGTTATGTCAGAGAGTCTGGGCTGACCACAAACCAAGCC
CAGGATGGCATTTAGCTCTTGCTGTGGATCAGACCGTCAGACCAAATAATCAGGGGGTCA
AACAAAAATAGGCCTTTGGCACCTCCAGGCCATGGAAAGCTCAATAAGCTCAATAAGCAA
CACACTGTAAATTCTAACCAATGAATAAAGATGTCAGGCTGAAACTGTTTCTTTTTTGTT
CAAGAAACAACACCAACACACACATCCGCATGCAAGACATTAGAGACAGGGGGTGCGAGC
AGGGGTCAGACCCCGTTTTTACGTGTATAGGCTGACCGCTAATTTTTTGGTGGACTTGAA
AACTTTCTAGCCCAACTGCCCAAGGCCCAACGTGGGAATCATAAATTAAGCCTCAAAAGC
TGGACGTACGCATTAAGAAAAAAGAGATTACGTGCAGCCATCAGCCAAGCAGTTAACTTC
CCGATCGATCTACTCTTACCCTACCGGTAGTTTCACGAGTGCCTTCAAGTCTTCAGGTTC
TTTAGGTTGCTGCGCCGCCGGCCGCCCCCGCCGCCTGTCGCTTCTCGTTCTCCGTCGGCT
TTTGCTGCTTTTGCCGCCGTCGTCCAGGGCAGTGGTCCGACACTTCAGAGTTCAGTTCGT
GCGATTTCAATCAAAAGATAGAAACTACTCCCTCTGTTCCTAAA